Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       --------->LBD16                                                                                    <---------ANAC55(2)                                                                                    <---------ANAC46                                                                                    --------->ANAC55(2)                                               --------->ANAC55(2)                  <---------ANAC58                                               <---------ANAC55(2)                  <---------ANAC58                                    ----------->HVH21                               <---------ANAC55(1)                                  <---------At4g35610                    --------->AHL20(2)--------->bZIP60(1)                                  --------->At4g35610                    <---------AHL20(2)<---------bZIP60(1)                                  --------->ZAT2    ----------->GT1   --------->AHL20(2)----------->HVH21                              --------->YAB1  <-------TEIL  <---------At4g35610 --------->GLK1(1)     ------->TEIL        <----------DOF2---------->DOF2------->TEIL  --------->AHL20(2)<-----------HVH21 ---GT1   <---------At4g35610<---------YAB1  --------->CCA1(2)----------->GT1   <---------GLK1(1)   gtttacgaatttagctacttattcggtctttttcatagctgacaaagatacataatgtatatagctgttaaataaaaaaatgaattccgtgtgacttcac  22748800                       <---------AtMYB61                   <---------ANAC58                   <---------ANAC46                                    <---------AHL20(2)                   <---------ANAC58                                    --------->AHL20(2)                   <------MYB46(1)                                     --------->AHL20(1)                   <------MYB83                                        <---------AHL20(1)                  --------->MYB55(2)                                  --------->AHL20(2)                  <------MYB83                                        <---------AHL20(2)                  <---------MYB46(3)                               --------->AHL20(2)                  <------MYB46(1)                            ----------->GT1                       <-                <--------P                                 <---------ANAC46                        --               <---------ANAC58                           <---------ANAC46                     <-----               <---------ANAC58                          <---------LBD16         >>>>>>>>>TBF1<------               <-------GAMYB   <---------ANAC46    <---------YAB1 --------->AHL20(2)          -------              <---------MYB46(3)  <-------TEIL     --------->ICU4 <---------AHL20(2)   ----------->GT1   cattagaacgcgtttttggttgggtgaggtctgatgtgcatcagaaacaagtgattatttggggggaaataaataaattcgaagaagaagtgtttataaa  22748900                                        --------->ANAC46                                --------->ETT(2)                                <---------ETT(2)                             <------MYB83                             <------MYB46(1)<---------HSFC1(2)    --------->YAB1          <---------AtMYB61 --------AHL20(2)           --------->MYB59 --------->HSFC1(2) ------->AHL20(2)       <---------TOE2(3)  ------->TEIL                     --------->ANAC58 ----AHL20(2)        <---------MYB52(1)--------->SPL7                ---------->DOF2  --------->MYB52(1) ---AHL20(2)        <-------GAMYB    --------->TOE1(2)             <---------TOE2(3) ----------->HVH21 -->AHL20(2)      --------->MYB59   --------->AtMYB61   --------->YAB1      --------->ANAC58   tttaaatcaaaatgttgaattcggttaagtttggtcgaccatacgaagcttcaaatattgatgacatttaagaaagaaacgcatgaggtaacagtgtaac  22749000                                                             --------->ANAC58                                                             --------->ANAC46                                                         --------->ANAC58                                                      ------->MYC2                                                      ------->MYC3 --------->AHL20(2)                                --------->AtLEC2      <-------MYC2 --------->AHL20(1)                           --------->ANAC58           --------->TOE1(2)                           --------->ANAC46           --------->TOE2(2)                           --------->ANAC55(2)        <-------MYC3 <---------AHL20(1)                           --------->ANAC58          <---------ANAC58       ------>MYB46(1)                      --------->ARR14(2)             <---------ANAC58       ------>MYB83                   --------->ANAC46          --------->At4g35610   <---------AHL20(2)            <---                   --------->ANAC58       --------->LBD16--------->ANAC58 <---------MYB59    <-------                   --------->ANAC58   --------->ARR14(2)--------->ZAT18<-----------GT1       --------      ---------->DOF2 <---------ARR14(2)  --------->At4g35610--------->ANAC58      ------>ZmHOX2a(2)   tcaacagttaatgcgaaatacacgaatacacgcgatgcaaaaaccgcagaagaaaacgtgcgcaagcaatttattaccaaattgatcccaaaacgacgtc  22749100                              <---------WOX13(1)                             <------------CBF                        <-----------HVH21                         ----------->GT1                       <---------TGA1a                     --------->ALFIN1                       --------->bZIP60(1)      ---------->DOF2  <------ZmHOX2a(1)                  *TSS                       <---------O2     --------->YAB1   <---------ANAC58                       <----                       --------->TGA1a <---------ATHB12  <---------ANAC58                     -------                       <---------bZIP60(1)  ----------->TBP<------NtERF2                      <------                       --------->O2  --------->WOX13(1)  <---------ANAC46                     <------ ------DEAR3(2)        ====================================bZIP_DOF                          -------- --O2                  ====================================bZIP_DOF      --------->AHL20(2)  -------- ->O2          --------->AtMYB61   ------------>CBF ---------->DOF2      <---------AHL20(2) <--------   gattcgattcacataaaccaaaacgacgtcggattgatgcaatcatataaaaaagaaaggcgtggaaggagttaataaaacttggaatgagacatgtcgg  22749200                                                                   ------>ZmHOX2a(1)                                                               <---------ARR14(2) --NtERF2                                                      --------->ARR14(2) -->ETT(1)                                                     <---------ARR11(3) ---DREB2C(2)                                          --------->ZAT18 ---RAP2.6(2)                      <---------DAG2      <---------ZAT14 ->RAP2.6(3)             --------->RAP2.3(3)           --------->ZAT14 ->DDF1 <---------ZAT6 <---------ZAT18    ---------->DOF2----------->RAV1(1) ---HVH21    <---------TOE2(3)     <----------DOF2     <---------ZAT18                  <---------CCA1(2)   ccatttcatggtgttaagaaaacagagccctcaaatactttttaaaaagaaacagagtgcaccaaaatcctcttaattttctcaaaattcaaatctctct  22749300                                                             --------------->AGL15                                                             <---------------AGL15                                                            =========================================                                                            <-----------------AGL3                                                            ----------------->AGL3                                                       <---------GLK1(1)                                                       --------->GLK1(1)                                                       <------ZmHOX2a(2)     <---------At4g35610           <---------AHL20(2) <---------AGP1  ---------->DOF2     ----------->RAV1(2)<---------HSFB2a(2)           --------->ARR11(3)     --------->At4g35610--------->HSFB2a(2)           <---------ARR14(2)  <------ZmHOX2a(2)    <---------LBD16                --------->ARR14(2)           ------->GAMYB --------->ARR11(3)  --------->GLK1(2)<---------WOX13(1)------>ZmHOX2a(2)       <-----------GT1 <---------ARR11(3) <---------GLK1(2)>>>>>>>>>ARR2    <---------ARR11(3)   ----------->GT1       <---   acagatcatctgagaaattttagattctggaatctatttgattgtctctctctacagatctctctgtatatagaaagaggtataactgtctatcgccatc  22749400                                                   --------->ARR11(3)                                                   <---------ARR11(3)                                                  <---------RVE1(1)                                                  <---------CCA1(1)                                                  --------->GLK1(1)                                                  --------->CCA1(1)                                                  --------->RVE1(1)                                                  <---------GLK1(1)                                                 <---------ARR11(3)                                                 --------->ARR11(3)                                                <<<<<<<<<RAP2.2                                        <---------------AGL15                                <------ZmHOX2a(1)                                        --------------->AGL15                              <---------TOE1(3)           <----------DOF2              =============================================================           <---------DAG2               ------>ZmHOX2a(1)                         <-----------GT1          <---------ANAC58             <-----------------AGL2                 --------->TOE2(3)  ----          <---------ANAC58             ----------------->AGL3             <----------DOF2  <---------TOE2(3)         ---------->ID1                <-----------------AGL3            <---------DAG2<----------DOF2 ========================================================MADS_MADS    <-----------GT1  <---------DAG2 -------DOF2                           ----------------->AGL2<----------DOF2  --------->TOE1(3) <----   tttatctccttggctttttctctctgttacaaactattcttcctatttttagatatcttctctctttgtaatttacctttcgttaaacactttaaggatt  22749500                                        --------------->AGL15                               <----------DOF2                               <---------DAG2                 <---------LBD16  <---------TOE1(3)           <---------ANAC58      --------->ICU4                              <----  <---------TOE2(3)           <---------ANAC58   <------ZmHOX2a(1)                           <------- =======================================================MADS_MADS      <---------YAB1        <------- ----->ATHB12  <---------GLK1(1)        <---------------AGL15 <---------HSFB2a(2)   --------->AHL20(2) ---TEIL   ---------->ID1<---------AtLEC2<----------DOF2 --------->MYB59          <----------DOF2 <--   cattagggtttttgtcgatttccttctgcattgcttttccttccttttggaggaatttttaggtctcggagttttgatttcgacctttaaattttgcttc  22749600       --------->GLK1(2)                                                ----------->GT1      <---------GLK1(2)                                                 <---------ANAC55(2)    ----------->ARR10   <---------ANAC58                                --------->At4g35610 <------ZmHOX2a(1)      <---------ANAC58                               --------->MYB59 -------RAV1(2)         ----------->GT1                                >>>>>>>GRF7                  < --ANAC58       <---------MYB52(1)          <---------ARR11(3)        <-----------RAV1(2)   --------- --ANAC58     --------->ANAC46   <---------ANAC46       <---------GLK1(2)                ----------->GT1 -------At4g35610       <---------ANAC46    --------->ARR11(3)      <-----------HVH21   ----------->GT1   agaggagagattctatccgttacagttcgtgaatttcgcgtttgaagaacttgaacttgattctgaagaatgtcaggtaaattttgagaagagataaaat  22749700  Previous    Next  AGI:  At5g56160.1    Description:  transporter. similar to SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein [Arabidopsis thaliana] (TAIR:AT1G55690.2); similar to SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein [Arabidopsis thaliana] (TAIR:AT1G55690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45191.1); contains InterPro domain Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251); contains InterPro domain Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273); contains InterPro domain Phosphatidylinositol transfer protein-like, N-terminal (Inter Range:  from: 22749200    to: 22752816    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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