Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       ----------->GT1               <------MYB46(1)               <------MYB83              --------->MYB59           --------->ARR14(2)           <---------ARR14(2)       <-----------------AG--------->ARR11(3)                      <---------YAB1       <-----------------AGL1               <-----------GT1    <----------DOF2     ------>ZmHOX2a(1)     <---------ARR11(3)-------->P        <---------DAG2      <-------TEIL   taaaatcctatcgaatttggtaagagtaacatcttacatatgaaatctaccattcacaaatactactttattagtaatatgcaaatgcataacaattttt  22746000                                                                                             <-------                                                                                           ----------           <---------AHL20(2)                                                          <---------AHL20(2)           --------->AHL20(2)         <----------DOF2                                  --------->AHL20(1)        --------->ARR11(3)         <-----------GT1                                     --------->AHL20(2)        <---------ARR11(3)---------->DOF2                          ---------->DOF2    --------->AHL20(2)   gtaatgtatagattttatttgcatataagaaagtgtttttcttttcatataagaaagttttttaagaacaaaaggaacatatgtcaaaaaaaattgtgat  22746100                                     <---------ICU4                                   <---------ARR11(3)                                   <-----------ARR10                                   <---------ARR14(2)                                   --------->ARR14(2)                                   <---------ARR11(1)                                  <---------CCA1(2)                          <---------TOE1(3)                    --------------->AGL15                    <---------------AGL15                   <-----------------AG                   ----------------->AGL1                   <-----------------AGL2                   <-----------------AGL1                            <---------YAB1                  ---------->ID1  <---------ARR14(1)              <----------DOF2               <----------DOF2    ------>MYB83                  <------------------------ANAC81               <---------DAG2     ------>MYB46(1)         <---------YAB1              <---------DAG2    <---------MYB59          --------->ARR11(3)        <----------DOF2           ---------->ID1 --------------->AtSPL8         <---------ARR11(3)  ------>ZmHOX2a(1)   <--- --YAB1 <---------DAG2    <---------TOE2(3)         --------->AHL20(2)  --------->GLK1(1)        <--- ->GT1  <----------DOF2   --------------->AtSPL3    <---------AHL20(2)  <---------GLK1(1)      ------   aagttttccacttttcccttttccccttaaggtaccaaatctttgcaatctgaaataaatatcattttcttttgatttcctgtttcttttttgaaaattt  22746200                                               <---------YAB1                                               --------------->AGL15                                               <---------------AGL15                                              <-----------------AGL1          <---------MYB52(1)                                              <-----------------AGL3         <-----------HVH21                               --------->ARR14(2)                            <-----------TGA1       -         ------>ZmHOX2a(1)     <---------ARR14(2) <---------YAB1  <---------WRKY12  <---------DOF5.7(2) ------ANAC58         <----------DOF2         <-----------------AGL2       <------NtERF2           <- ------ANAC58      <---------AHL20(2)  --------->MYB52(1)         <---------WRKY38(1)  --------->ATHB12 --->ARR11(3)      <-----------GT1  <---------AtLEC2       ---------->DOF2<---------ATERF1(1)   -----   cttgtttaatccttcttctattttctttttccaaatttgcataacgtttcttattatggacaaaagagtcaatgggctccgtcagtaaacgattgggcct  22746300                                <---------ANAC58                                <---------O2                                --------->O2                                --------->TGA1a                                <---------TGA1a                                =================bZIP_DOF                                <---------bZIP60(2)                                =================bZIP_DOF                                <---------ANAC58                                <---------ANAC46                                <---------ANAC55(2)                                --------->ANAC55(2)                           --------->ANAC58                           --------->ANAC58                          --------->ZAT18                        --------->STY1(2)                        <---------STY1(2)           --------->ANAC58                        <---------ZAT2              --------->ANAC58                   <-----------ARR10            --------->DEAR3(1)             <---------ARR11(1)                   --------->GLK1(2)          <---------At5g28300        <-----------GT1 -------->YAB1    <---------GLK1(2)          <---------ALFIN1   --------->GLK1(2) --------YAB1 <-------TEIL<---------ZAT18  <-----------HVH21  <------ZmHOX2a(1)--------->ARR14(2) ---->ICU4<---------ICU4--------->ZAT2---------->DOF2 ---------->DOF2----------->TBP            <----   tattatagcccataagtacagaatctagctcgctacgtggcaaagcttcaccgctcgaaagagaggaatctatataaaccgtatcgatgctaacaagttt  22746400                                                                     <------MYB46(1)                                                                     <------MYB83                               <------ZmHOX2a(2)                     ----------->GT1                              --------->ARR11(3)                    --------->MYB46(2)                              <---------ARR11(3)                    --------->MYB59                            ----------->ARR10                      <--------P                     --------->GLK1(1)                          --------->DAG2              --------------------->WRI1                      ---------->DOF2  *TSS    -------->P <---------GLK1(1)                    ------>MYB83          --------->At4g35610 ---TEIL--------->MYB46(3)--------->LBD16                 ------>MYB46(1) --------->ICU4   catcttcaaaacaaccccttgagatttccgaagatcatcaaatccaaaaccctagaaaccgaacaaaaggtaggtcaaaattagctccgataaatctcga  22746500                                                                                        <---------ANAC58                                                                                        <---------ANAC58                                                                                    <---------ANAC58                                                                                    <---------ANAC58                                                   ------>ZmHOX2a(2)       --------->ARR14(2)      <-                                                 --------->ARR11(3)        <---------ARR14(2) <------ZmHOX2a(2)               <---------MYB52(1)                <---------ARR11(3)        <---------MYB52(1)<-------             <---------ICU4                --------->ARR14(2)          <---------LBD16  <---------ANAC46          --------->YAB1                   <---------ARR14(2)  <---------GLK1(2) <-----------GT1   --   tttcgatttgaatcatcgttactcttagggtttattcgtttcccagttcttgatcttcgtcgtttgattctctcgcggttttgtttccttgcgtcgatcc  22746600                                       <---------MYB46(2)                                       <---------MYB111(1)                                       <---------MYB59                                     ------->TEIL                                  --------->TOE1(1)                                 --------------->AtSPL8                             --------->KAN4(2)                                     ------>ZmHOX2a(2)                             <---------ARR14(2)                                  <---------AGP1                            <---------HSFB2a(1)                                  <---------ARR11(3)                            --------->HSFB2a(1)                               <---------WOX13(1)                            <----------TaMYB80                               <---------ANAC58                            <---------KAN4(1)                                <---------ANAC46                            --------->KAN4(1)                           <---------ARR14(2)                           <---------KAN4(2)                            --------->ARR14(2)                       --------->HSFC1(1)------>MYB83 <-----------GT1<---------ANAC46                       <---------HSFB2a(2)        --------->ATHB12   <---------ANAC58                       --------->HSFB2a(2)       <---------YAB1      --------->ANAC55(2)                       <---------HSFC1(1)------>MYB46(1)  <----------DOF2    <---------ANAC58 ------MYC3            >>>>>>>ZML2--------->TOE2(1)   <<<<<<<<<GT-1  <---------ANAC55(2)            < --ARR14(2)  --------->ARR11(3)  --------------->AtSPL3  --------->TOE2(3)<---------WOX13(1)       -- ----->MYC3<---------MYB52(1)--------->ARR14(2)<---------At4g35610   <---------ANAC58              <-   atgtgttttttctgttatcttggttctagaatattctcgtacctacttctgatgatttacctttaactgatgcgtaattgcttgatctgtttctgaattg  22746700                                                     <---------ANAC46                                    <---------ARR14(2)                         <--------P          <-                                    <---------GLK1(2)<---------ANAC58          <---------WOX13(1)  --       <-----------GT1              --------->ARR14(2)                   <-----------GT1           -- <---------MYB52(1)              ------>ZmHOX2a(2)   <---------ANAC58<---------ARR11(3)           <-- -------GAMYB                <---------YAB1       <----------DOF2    --------->ARR11(3)         ----- ------->MYB52(2)        <---------ARR14(2)      <---------ANAC58    <---------GLK1(2)      <------ZmHOX2a(1) --------MYB46(3)     ------>ZmHOX2a(2)          <---------ANAC58 --------->HSFB2a(2)    <-----------RAV1(2)   ttcgttgattttctctctgtttgatcgaattctgatcggattgtctcttgggcttgagtgtttgatttcgagatttttctggttgatttcttcaggaggt  22746800                       <---------ARR14(2)              <---------YAB1            <---------ICU4           <----------DOF2 --------ARR14(2)      --------->ARR14(2) <----------DOF2                                         <-- ------->ARR14(2)  <---------At4g35610  ----------------->AGL1                             <---------ZAT14 ----->TEIL--------->ICU4       --------->DAG2                                             --------->ZAT14 -------CCA1(2) ---------->DOF2---------->DOF2  <------ZmHOX2a(1)                        ------------ ---->ALFIN1--------->YAB1  <---------AtLEC2  <---------TOE2(3)  --------------->AGL15  <---------ANAC46   gtatcttaggctaattatcaaagctgatttgcataaagtctttccttttaggatagctatgttcttgctccatatgttaactggtttttgctgtgtactg  22746900  Previous    Next  AGI:  At5g56150.1    Description:  UBC30 (UBIQUITIN-CONJUGATING ENZYME 30); ubiquitin-protein ligase. similar to UBC28, ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT1G64230.1); similar to UBC28, ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT1G64230.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN77946.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608); contains InterPro domain Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135) Range:  from: 22746402    to: 22748413    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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