Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           <---------At4g35610                                         --------->At4g35610                              <---------ANAC58                                       <---------ANAC58                                   <---------ANAC58    --------->MYB52(1)           <-----------RAV1(1)                                      <---------ANAC46 -----AHL20(2)                  <---------TOE2(3)                                     <---------ANAC58 --->AHL20(2)              --------->TOE2(3)  <-------GAMYB                        <---------ATHB12 ->YAB1     --------->AtLEC2<----------DOF2  <---------ANAC46           <-----------HVH21 <---------ANAC55(1) -YAB1 ------->GAMYB<-----------GT1    <---------ANAC58         ----------------->AG  <---------ANAC58   aatagataacagacatacaaaattacaaacctttgatgttggcttctgcgttgaagtctacaaaatcccaaaaatgtcatttccaataacttgcgtatgt  22738200                     <-----------ARR10                                   --------->AHL20(1)                     <---------ARR11(3)                                  <---------ARR11(3)           --------->AHL20(2)      <----------DOF2                       --------->ARR11(3)           <---------AHL20(2)      <---------DAG2                        <---------AHL20(1)   <------       --------->AHL20(2)       <-----------GT1<---------YAB1           --------->AHL20(2)   <-------     ----------->GT1 --------->GLK1(2)        <---------AHL20(2)  --------->YAB1       --------->AHL20(2)   ---------->DOF2  <---------GLK1(2)       <---------YAB1       <-------TEIL          <---------AHL20(2)   gttttgaaagtaattaaaaacagaatcttatttgttactttattctattattttagtaatagaaaaattcataaatatatcacttgttataaattgtggt  22738300         --------->ANAC58         --------->ANAC58         <<<<<<<<<<<<<<<<<LFY                                                                      --     --------->ANAC58                   ------------------------>ANAC81                            --     --------->ANAC58                   ----------->GT1                                   <---------CCA1(2)   ---------->DOF2               ---------->DOF2        --------->ATHB12                <---------ANAC58 ---ANAC46                 <----------DOF2    --------->AHL20(2)  ----------->GT1       <---------ANAC58 --AtMYB61          --------->YAB1    ---------->DOF2   --------->YAB1       ---------->DOF2<--------   ggaacaaaagcaaacaatggaatcatatactttagaaaagaaaagaaaaaaaatggaatcatagggcctagttaaactataaagcacattgcatatcatt  22738400                                                                      <---------ARR11(3)                                                                      --------->ARR11(3)                                                                    --------->DAG2                 --                                                          --------->DAG2                      -------                                                       <---------MYB52(1)                    --------                                                       --------->DOF5.7(2)                 --------->ZAT2 ----------------->AGL3                  ----------->GT1 <---------DOF5.7(2)               --------->At4g35610 -------->ID1                 <---------ANAC58        <---------RAP2.6(3)                  <---------ZAT2 ---->NtERF2 ------------>ATHB5         <------ZmHOX2a(1)---------->DOF2                   <---------At4g35610 -YAB1---------->DOF2         <---------ANAC58  ---------->DOF2   ---------->DOF2         -----------   cggcccattaaaggcccaaatattggctatatgcgttttggaggagaaaatatagccgttaaagtgagaaaaggtctcttactatgttatcgcagcagta  22738500                                                             ----------->TBP                                               ---------->DOF2       --------->TOE2(3)                       <---------DOF5.7(2)      <---------ANAC55(2)                    <---------MYB52(1)      ----------->GT1                 ---------->DOF2        <---------AHL20(2)    --------->MYB52(1)        <---------MYB52(1)             --------->AHL20(2)              -------- --------->RAV1(1)           <-------GAMYB   --------->DOF5.7(2)    --------->TOE1(3)       --------- -->At5g28300           ----------->HVH21   <---------RAP2.6(3)   --------->MYB52(1)        <-------- --->GT1          ------------>CBF <-----------TBP          --------->AHL20(2)        ---------->DOF2 >RAV1(1)  ---------->DOF2   --------------------->WRI1------------>CBF          ---------->DOF2   *TSS   acaacataacgtaaaaagaaaacaatccgaccgttgtacatatagccgttaaagaacaacaatttaaatacctgaaattttgtgaaagaaaaggaattct  22738600                      <---------ARR11(3)                          <------ZmHOX2a(2)                      --------->ARR11(3)                          --------->GLK1(1)                      <---------ARR14(2)                          <---------GLK1(1)                      --------->ARR14(2)             <----------DOF2                     <---------CCA1(2)              <---------ANAC58              --------->DAG2              ------->GAMYB                         <---------ANAC58             ---------->DOF2             <---------MYB52(2)        <-----------GT1    ------>ZmHOX2a(1) --------------->AGL15 ->ICU4 --------->ANAC46            <---------At4g35610   ================HOX2a_HOX2a >GLK1(1)    --------->MYB46(3)     --------->At4g35610   ===============HOX2a_HOX2a               <- -GLK1(1)  --------->MYB52(1)  --------->YAB1    <---------WOX13(1)------>ZmHOX2a(2)         <-------   tactaaaaaaacacaacgaactcaaatcttcaatcttcatcttactctctaattgctttcctattccgatctctgtttcttcataaagtctcaatctttt  22738700                                                                                          <---------ANAC58                                                                                          <---------RAP2.6(2)                                                                                          <---------ANAC46                                                                                          <---------ANAC58                                                                                      <-------GAMYB                      --------->GLK1(2)                                               <---------ANAC58                     <---------ARR11(3)                                               <---------ANAC58                     <---------ARR14(2)                                              <------MYB46(1)                     <---------GLK1(2)                                               <---------MYB46(3)                     --------->ARR14(2)                                              --------->MYB55(2)                     --------->ARR11(3)                                              <------MYB83            <------NtERF2                                                            --------->MYB52(2)           <------NtERF2                                                            <---------AtMYB61           --------->LBD16                                                         <---------MYB52(1)          --------->RAP2.6(2)             <---------HSFB2a(2)                      xxxxxxxxxxxxxxxxxx         <---------LBD16                  --------->HSFB2a(2)                 ----------->RAV1(1) ----------GT1   ---------->DOF2       --------->GLK1(2)   ---------->DOF2    ------------>AtMYB77 -- ---DOF2 <---------ANAC46      <---------ANAC46--------->At4g35610           --------->MYB46(3)    <-   ttttctctatggccggaactaaagattctcatgtagtggagattccagtagatgaagagcataaagagagacaacaacaacaacagttggttgcggtctc  22738800                                                                             <----------DOF2             --------->ARR14(2)                                             <---------ANAC58             <---------ARR14(2)                                             <---------ANAC46             <---------KAN4(2)                  <---------GLK1(1)           <---------ANAC58   --------->LBD16                              --------->GLK1(1)        ---------->ID1  <---------LBD16                        --------->WRKY38(1)           --------->MYB52(2) <---------LBD16                 --------->At4g35610                   <-----------RAV1(1) >smallRNA(fl3)               --------->At4g35610                      <---------MYB46(3) ------->ARR14(2)             <---------At4g35610                <------ZmHOX2a(1) --------ARR14(2)  ---------->DOF2      <---------MYB52(1)      --------->ANAC46            ---------   aaatccgggaatgggaatactcaaagtgattcagcagcatccgttgtctgaaatctcagagagtccaggacatttgttgcttttgaagttatggcaaaga  22738900                                                                  <----------DOF2                                                                 ==============================HOX2a_HOX2a                                                                 ------>ZmHOX2a(2)                                                                ===============================HOX2a_HOX2a                                                                <------ZmHOX2a(2)                  <---------ANAC46                             <---------ARR11(3)                 <------NtERF2                                 --------->AGP1               <---------ETT(2)                                --------->ARR11(3)    <---------ARR14(2)                                        --------->GLK1(1)    --------->ARR14(2)               --------->YAB1    ---------->DOF2       ---------->ID1    --------->ARR11(3)        ---------->DOF2        --------->YAB1      <----------DOF2    <---------ARR11(3)   --------------->AGL15    --------->WOX13(1)   --------->At4g35610  ----------->ARR10      <---------------AGL15<---------ZAT6  <---------GLK1(1)         ------>ZmHOX2a(1) ->DOF2     <-----------RAV1(1)    --------->GLK1(2)<---------ATHB12   <---------At4g35610   gaagaagatttgttctgtcgtcgtgttcttcttaaagaatcaagactagagtcaatcaaaagagagatctttcagctttgttgtttcttcctagtcttcc  22739000                                                          --------->DAG2                                                    ----------->GT1                                                 <---------ANAC58                                                 <---------ANAC58                                                 ===================bZIP_DOF                                                 <---------ANAC46                                                 --------->TGA1a                                                 <---------O2                                                 --------->O2                                                 ===================bZIP_DOF                                                 <---------TGA1a                                                 <---------bZIP60(2)                                                 --------->bZIP60(1)                   <---------GLK1(1)                                               <---------TGA2(2)                      <---------ARR14(2)                                              ----------->TGA1---------->DOF2         --------->ARR14(2)                                              ----------->HVH21                     <---------MYB46(3)                                            <---------At4g35610                    <---------ANAC46                                            --------->At4g35610            --------->ANAC58                                      <---------At4g35610---------->DOF2   --------->ANAC58    <-----      <<<<<<<<<TBF1                  <---------YAB1--------->ALFIN1      <---------AtLEC2      ------   atgggttcttcttcacacttgtctactcttcttcttgttctgatgatgctgacgtggtgaaaagtaatgcggtttgcaagaaatggtggataccttctgc  22739100  Previous    Next  AGI:  At5g56120.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G12870.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45199.1) Range:  from: 22738599    to: 22739839    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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