Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               <---------AHL20(2)                            ------->GAMYB <---------ARR11(3)                           --------------->AtSPL8                                      --------->CCA1(2)                           --------------->AtSPL3                      --------->YAB1 --------->ARR11(1)              <---------ARR14(2) <---------DAG2                        <---------ICU4 --------->ARR11(3)  --------->GLK1(2)       <---------At5g28300--------->AHL20(2)       --------->AHL20(2)  --------->ARR14(2)     <-----------GT1  --------->ARR11(3)          <---------AHL20(2)  <---------ARR14(2)  --------->YAB1    <---------TOE2(3)       ------->TEIL          --------->ARR14(2) ->DOF2       --------->ARR14(2) <----------DOF2              <-------TEIL            <---------ARR14(2)   agcggttctgttttcagatttgaatattaaccgtactttactaagatttatattcttgtcaaaatgcatctattaattatctatagtagatatggtaatg  22731300                     --------->ARR14(2)                  <---------ANAC58                  <---------ANAC58                          --------->ANAC46                  <---------ANAC46                      <------ZmHOX2a(2)                 <-------TEIL                          --------->ARR14(2)                    <-------        --------->AHL20(2)                             <---------ARR14(2)           --------->YAB1---       --------->AHL20(2)          --------->ICU4--------->ZAT18               ----------->GT1-------     <----------DOF2 <---------ARR14(2)       <---------ANAC58       --------->ARR14(2)      --------   --------------->AGL15--------->ANAC46      <---------ANAC58       <---------ARR14(2)     <--------   ctataccctttaaattaagtgcgtatacatcatggtcatgttgagtttgagtgcgacgatccacgtagtcatatactcatatggtatcaaaatttctgga  22731400                                                                              <---------AHL20(2)                                                                             <---------AHL20(2)                                                                             <---------AHL20(1)                                                                             --------->AHL20(1)                                                                             --------->AHL20(2)                                                                         <---------AHL20(2)                                                                         --------->AHL20(2)        --                                                                        --------->AHL20(2)      <<<<< --HSFB2a(2)                              ----------->GT1             --------->YAB1    --------->ANAC55(2) ------>ARR11(3)                      <---------AHL20(2)        <----------DOF2         <------MYB46(1) -->LBD16                        <---------YAB1                --------->TOE1(3)        <---------ANAC55(2) ->HSFB2a(2)                 <----------DOF2                   --------->TOE2(3)        <------MYB83 -LBD16--------->YAB1        <---------DAG2       --------->TOE2(3)--------->YAB1  <---------YAB1 ---   gatttagtatggtaatcgaaaactcaaaaccctttatgatttttttgttaaaacttaaaacaaaacctttaataataaataaaatttgataggtatttag  22731500                                                                                               <-----                                                                    <---------ANAC55(2)        ------                                                                    --------->ANAC55(2)    <---------AHL20(2)                                                               <---------ICU4              --------->AHL20(1)                                 ---------->DOF2               --------->ATHB12            --------->AHL20(2)   ------->TEIL            --------->AHL20(2)                  --------->YAB1--------->At4g35610   <- ------------->AtSPL8  <----------DOF2      ------>ZmHOX2a(2) <---------ATHB12            --------->AHL20(2) <<<<RAP2.2       --------->ETT(1)        --------->ARR11(3)  --------->ICU4 ----------->GT1  <------ ------>CCA1(2)<-----------RAV1(1)        <---------ARR11(3)--------->YAB1   <---------At4g35610 <---   atatgtacttgcatattatgtcggacttttaaaataaaagtttagatcgtttgaacatccaaaaatcattaagtaagtcagataaaaaaaaaaaaaatta  22731600                                  <---------AHL20(2)                              --------->AHL20(2)                              --------->AHL20(1)                              <---------AHL20(2)                             --------->AHL20(2)                     ----------->GT1                                 ------>ZmHOX2a(1)       --------->YAB1<----------ID1                                <---------ANAC58      <---------YAB1<---------TOE2(3)                              <---------ANAC58             <---- ----AHL20(2)     ---------->DOF2 --------->AHL20(1)             <-----------GT1            <-------- --->AHL20(2)    <---------AHL20(2)                        <-----------RAV1(1)    <---------ALFIN1 --------AHL20(2)--------->AHL20(2)               <------------CBF <---------ANAC46         <-------- ---AHL20(2) --------->AHL20(2)   --------->AHL20(2)      ------->TEIL     <---------ANAC58 <-------- ------YAB1  <---------AHL20(2)  --------->AHL20(2)   <---------TOE2(3)    <---------ANAC58----------   ttttttttatcataaaaaattaaaggaaaaaaaaaattaattgtttttttgctattgatgtatgttgtttcctgttttcgttcaacacatcgtgtcgttt  22731700                                   <---------ALFIN1               <-----------HVH21                                   ----------->RAV1(1)    <---------KAN4(2)    --------->LBD16                --------->AtMYB61  --------->LBD16   <---------LBD16                --------->MYB46(3) --------->ANAC46 -------TBP                     --------->RAP2.6(2)  --------->LBD16 -ANAC46                        --------->ANAC46    <---------LBD16  <---------DEAR3(2) -ANAC58       --------->MYB52(2)------>NtERF2    --------->ARR14(2) <---------MYB46(3) -ANAC58 <------------CBF      --------->MYB46(3) <---------ARR14(2)--------->ETT(1)              <-- >ID1--------->LBD16       ---------->DOF2  *TSS  ------->TEIL<---------LBD16              --------->CCA1(2)   ttatacccggacattgttagtgtctaccatatagccaccacagcaaaacccgaacccggaaatattcgggtcgggtcgaagttgcagaatgagatttgat  22731800                                                                         <---------ARR14(2)                                                                         --------->ARR14(2)                                                                       <------MYB83                                                                       <------MYB46(1)                                                                     <--------P                                                                    <-------GAMYB                     --------->ANAC58                              <---------MYB46(3)                 ----------->HVH21                                 --------->MYB55(2)               <------NtERF2                                       <---------DEAR3(2)               ----------->RAV1(2)                                <---------DEAR3(1)               <---------ANAC46                               <---------LBD16              ------>NtERF2                                   <---------ANAC58            ---------->ID1                                    <---------ANAC46          <----------ID1          <-----------RAV1(1)     <---------ANAC46            <---------ANAC58          <------ZmHOX2a(1)          =================RAV    <---------ANAC58        <---------HSFC1(2)          <--------------      <---------DAG2 --------->ANAC58                     --------->HSFC1(2)     ----------->HVH21 --      <----------DOF2--------->ANAC46                   <---------ARR11(3) ------>ZmHOX2a(2)--------- ---------GT1--------->ETT(2)     <---------ANAC58      --------->ARR11(3) ====================HOX2a_HOX2a   ttgccatactttttgtcgcctgaacgcaaaaaccttgcttaaaccctagagagatagagatgtttcgggcggttggatcggctctgaagaggaacaaaga  22731900                           <---------ALFIN1                             <---------HSFB2a(2)                        <-----------GT1                         <---------ZAT2                      -                     <---------ARR14(2)                         --------->At4g35610                 <                     --------->ARR14(2)                         <---------At4g35610              <--- -AtSPL8            <------ZmHOX2a(1)                        ---------->DOF2      --------->At4g35610 --------->GT1<---------ANAC58                           --------->ZAT6 --------->HSFB2a(2)     <---- ->DOF2       <---------ANAC58                  <-----------GT1 --------->ZAT2    <---------At4g35610   agcgtttaatggaattgctcgaggattcaccacttcgtctcatcgagttttcacttctaacattacagctgcttctgtaacctctgcttcgtcttctcct  22732000                                                                        <---------DAG2                                                                        <----------DOF2                                                               ----------->GT1                                                        --------------->AGL15                                                        <---------------AGL15                                                        ----------------->AGL1                                                        ----------------->AG            =======================HOX2a_HOX2a         ----------------->AG            ------>ZmHOX2a(1)                          <-----------------AG        <---------TOE2(3)       --------->HSFB2a(1)      --------->At4g35610    ----------------->AGL1      <---------TOE1(3)       --------->HSFC1(2)       <---------At4g35610    <-----------------AGL1    ---------->DOF2       <---------HSFB2a(1)  ------>ZmHOX2a(2)          ==============================================       <---------HSFC1(2)  <------ZmHOX2a(2)      --------->ATHB51<-------TEIL   <---------DOF5.7(2) -------->At4g35610 <---------ANAC46       <---------ZAT6     --------->DAG2  --------->TOE2(3) ---------At4g35610 <---------ANAC58       ----------->GT1    <---------TOE2(3)--------->DOF5.7(2) ------MYB52(1)     <---------ANAC58       <---------ANAC46 ---------->DOF2   --------->TOE1(3) ------DOF2 ======================HOX2a_HOX2a     <---------ICU4 <--------P ---------->ID1   <-------   ttagctggaaactccttctatggcttgcgatctctgctcaaggtagtgtgaataatttcccaaaaaggttgatactttttcgttaaaggttgagactttt  22732100                                              ------>ZmHOX2a(1)                                              --------->LBD16                                            ------>ZmHOX2a(2)                                            =============================HOX2a_HOX2a                                           ==============================HOX2a_HOX2a                                           <------ZmHOX2a(2)                                          <---------ARR11(3)                                          --------->ARR11(3)                                          <---------ARR14(3)                                          --------->ARR14(3)                                          <---------ARR14(2)                                 <---------------AGL15                                 <----------DOF2                                 --------------->AGL15                     <---------ARR11(3)   --------->ARR14(2)                     --------->ARR11(3)  <------ZmHOX2a(1)          <<<<<<<<<MYB98         <---------DAG2        ----------->GT1         <-----------------AGL3                      <---------ANAC46 =================================================MADS_MADS            <---------YAB1 ---DOF2<---------YAB1     <---------MYB46(3)--------->TOE1(2)    <------ZmHOX2a(1)----------->GT1   gatcagggttatgttaaacttgagatttttggttacttttagaggatcctgagattgggctctgatcaggattatgttttgtgtagggtcaaaatgcttc  22732200  Previous    Next  AGI:  At5g56090.1    Description:  COX15 (CYTOCHROME C OXIDASE 15). similar to unnamed protein product [Vitis vinifera] (GB:CAO45211.1); contains InterPro domain Cytochrome oxidase assembly; (InterPro:IPR003780) Range:  from: 22731744    to: 22734061    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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