Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    --------->ALFIN1                                                <------MYB83                                               <---------AtMYB61                                               --------->MYB111(1)                                               --------->ALFIN1                                 <----                                               <---------DEAR3(1)                              ------                                               --------->MYB111(2)                             <-----                                            <---------ANAC46                                   ------        --------->ALFIN1                   <---------LBD16                                   --------      <---------ANAC58                    <---------ANAC46                                   <-------      <---------ANAC58                 <---------ANAC46                                    --------->LBD16      <---------ANAC46                 <-----------RAV1(1)                            ----------->HVH21      <---------ANAC55(1)           <---------MYB52(1)                                <---------SPL7-     <------NtERF2                --------->HSFB2a(1)                               <---------At4g35610 <-------GAMYB                    <---------HSFB2a(1)<---------ARR14(2)             --------->At4g35610 -------->ALFIN1             --------->HSFB2a(2)<------MYB46(1)                     <------NtERF2  <- -----------RAV1(1)          <---------HSFB2a(2)<---------ANAC46      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   gtgtgttggcgtgtgagtcgatgtcgaagttgtggaacgttgtgttggggaggtggaacttggccaagacgatggaagtaagtggcatcggaccggaacc  22729200         <----------DOF2      ------>NtERF2          <---------ANAC46 -----------AGL15            <---------ANAC58 --->MYB46(3)            <---------ANAC58   --------->GLK1(1) ------------AGL3        <---------ANAC58 <------ZmHOX2a(1) ----------->AGL3----------->HVH21     --------->CCA1(2) ->ARR14(2)      <------NtERF2  --------->REM1(2) <---------ARR14(2) --ARR14(2)<---------AtMYB61 <---------ANAC58     --------->ARR14(2)              <---------YAB1 --------->DOF2 <---------DEAR3(2)  <---------TOE2(3)                        <---------MYB46(3) --------ATHB12--------->ETT(1) <-------GAMYB <------ZmHOX2a(2)       <---------TOE2(3)     ---------   aataaaggcgactttggtcgggacatgggttgtgtgttgagataggagatcgaattcgagtttgcctagtttgagatagttgttgtaataggggaagatg  22729300                                                <-----------RAV1(1)                                --                                             --------->DAG2                                       <--                                            ---------->DOF2                                      <---                        ---------->DOF2--------->At4g35610   <-----------GT1   ---------->DOF2   ---- -->ARR10     <-------GAMYB       <---------YAB1--------->ALFIN1         --------->REM1(1) --------->At4g35610   tgtaaatggtttagagggttgtcttcaaaagagcctaagattgctgaaaagtgttgctctaaataaccttcggcttcaccacaaagcttgatgagatgag  22729400                                                                 ------->PIF5                                                                 <-------PIF5                                                                 ------->MYC4                                                                 <-------MYC4                                                                 ------->PIF4                                                                 <-------MYC3                                                                 ------->MYC2                                                                 <-------PIF4                                                                 ------->MYC3                                                                 <-------MYC2                                                                <---------O2                                                                <---------TGA1a                                                                --------->TGA1a                                                                =================================bZIP_DOF                                                            --------->ANAC58                                                            --------->ANAC58                                                        <------MYB83                                                        <------MYB46(1)                                                      <---------MYB52(1)                          ---             <----------DOF2                         <-------GAMYB                            <------             <---------DAG2                          =====================MYC_MYB            <-------       <----------DOF2                        <---------ANAC58  --------->O2                 <<<<<<<<   <---------CCA1(2)                <---------bZIP60(1) <---------MYB46(3)                   <<<<<<<< ---->ZmHOX2a(2)                 ----------->HVH21  <---------MYB46(3)                       <------- ----ZmHOX2a(2)                 <-----------HVH21<-----------HVH21                           -------- ------ARR11(3)           ------->TEIL        <---------ANAC58 ------------>OsbHLH66      --------->ALFIN1 ----->ARR11(3)          <---------CCA1(2)   <-------TEIL   ----------------->PIF3(1) ---------->DOF2   atctcatgtctttgactttttcatcgtgtatctctgtgacatcgatgttcgtgtccgttggtaagcacgtggacacaagttgtctgaacaaagtgtcgac  22729500       ----------->GT1       <------MYB83                                                                      --------->bZIP60(1)       <------MYB46(1)                                                                   >>>>>>>>>>bZIP19 ------>GLK1(2)                                                                          --------->ETT(2) ---DDF1                            <-------GAMYB                                        >>>>>>>>>>bZIP23 --ETT(2)                          <------MYB83                                          <---------ETT(2) <<bZIP19                       --------->CCA1(2)        <---------ANAC58               --------->DDF1 <<bZIP23       --------->ARR11(3) <------MYB46(1)       <---------ANAC58        --------->ANAC58 --bZIP60(1)   <---------At4g35610<---------AtMYB61--------->ATHB12              --------->ANAC58 ->ETT(2)    <-----------GT1 <---------TOE2(3) <-------TEIL           <--------P --------->ANAC46   attcttggatggttttaagctctcgaggtttgagatttggttgtataagtccatgatttgcttcacaacgaggttgttttcgcaagccatgtcgacacta  22729600                                                                                            <--------                                                                                         <-----------TBP                                                                                      <---------MYB52(1)                                                                          --------->ANAC46 --------->ATHB12                                                                          --------->ANAC58 <---------AHL20(2)                                                   <-----------RAV1(1) ==============================                                               <---------ANAC58        ------->GAMYB <-------GAMYB                      <------------CBF     ---------->DOF2       --------->TOE2(3)   ================         <------------CBF             ----------->GT1      <-----------RAV1(1)      <---------MYB46(3)       --------->GLK1(2)       <---------------AGL15  <---------MYB46(3)  --------->ANAC58<---------AHL20(2)       <---------ARR14(2)    ------------>CBF  <---------ANAC58  --------->TOE1(3)  ----------->GT1 -   tgaagagagaatattgagttttgaaattgttttcaatacttggaaaaaagcttgtgttgttgtgttgccttaaccctcgcaaggggtcgttatttattga  22729700      <---------PCF2      <---------ANAC46   --------->ALFIN1  <-------MYC2  <-------MYC3  ------->MYC2                             <---------AHL20(2)  ------->MYC3                         <---------AHL20(2)                                          -- <---------TGA1a                       --------->AHL20(2)                                          <- ----CBF <-------TEIL                 <---------AHL20(2)                                 <---------TOE2(3) ==========MYC_MYB                <---------AHL20(1)      <---------TOE2(3)           <---------AHL20(2) ==========MYC_MYB                --------->AHL20(2) <-----------TBP                  --------->AHL20(2) ------>TEIL                      <---------AHL20(2)<-------TEIL           ------>ZmHOX2a(1) ------->TEIL   cgcatgtggggtccattcttggctaaattttgttattttatttatttgattcgattcatataggttacaaatatttcctctaggtcattttaatgtatgt  22729800                                                                                     ------>ZmHOX2a(1)                                                                          <--------HAHB4                                                                         <---------YAB1                                                                     <----------DOF2 <---------------AGL15                                                                ----------->HVH21    --------------->AGL15                                                                ------->GAMYB       --------->TOE2(3)                                                             <-----------GT1     --------->ARR14(2)                                                            <---------YAB1--------->YAB1      <------------CBF         <---------ANAC58          <---------AHL20(2) <---------YAB1 ------->HSFB2a(2)             <---------ANAC58 ------>ZmHOX2a(1)    <---------DAG2 --------->TOE1(3) --------HSFB2a(2)      <XXXXXXXXXXXXXXXXXXXXXMIR447A/B --------->AHL20(2)<---------ICU4    ---------   tttagaactattgtttttttgtttcaaaacgtttcgtttccaaataagtcctcacaaattttataactgacctttatcattactatcctcaaaatagtaa  22729900                                              <---------MYB59                                             <---------ANAC55(2)               --------->MYB52(1)                                        <---------ZAT6      <---------ANAC58  <---------AHL20(2)                                <------ZmHOX2a(1)           <---------ANAC58 --------->ICU4                               <----------ID1--------->ANAC55(2) <------ZmHOX2a(1)               ----    --------------->AtSPL8---------->DOF2 <---------MYB52(1)<---------ANAC46 <---------YAB1      <--- -->GT1              ----------->GT1<---------ZAT14  <-----------GT1    ----------->GT1       <------   aaataccatgtacaacttaaaaaatgtaaaaagaggacaatactgttacctattttcacattgcttaggaatgagagtaattaatggctgatcaagttac  22730000                                                                                                    <                                                                                                    <                                                                                               ------                                                                                              <------                      --------->ANAC58                                                        -------                      --------->ANAC58                                                  <---------TOE2(3)               <------NtERF2                                                      --------------->AGL15             <---------DEAR3(1)                                                   <---------------AGL15             <---------ANAC58                                                    <-----------------AGL2             <---------ANAC46                                                    ----------------->AGL3 ----->TOE2(3)--------->LBD16                    --------->ARR14(2)              <-----------------AGL3 -------DOF2 <---------ANAC58           --------->HSFB2a(2)                      ==================== -----GT1   <---------LBD16    ----------->GT1--------->YAB1                     ----------------->AGL2   tttagtcacaaattggcggggaacaagacaaactagtaacttatagaatcatatacactcttcaactaaaaatcgcgatatgttccatttatggatttta  22730100  Previous    Next  AGI:  At5g56080.1    Description:  nicotianamine synthase, putative. Identical to Nicotianamine synthase 2 (NAS2) [Arabidopsis Thaliana] (GB:Q9FKT9;GB:Q9ZWF7); similar to nicotianamine synthase, putative [Arabidopsis thaliana] (TAIR:AT5G04950.1); similar to nicotianamine synthase [Thlaspi caerulescens] (GB:CAC82913.1); contains InterPro domain Nicotianamine synthase; (InterPro:IPR004298) Range:  from: 22728628    to: 22729590    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version