Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        <---------YAB1                                                                    <--------HAHB4                                                                    --------->ATHB51                                                                    --------->ATHB12                                                                    <---------ICU4                     --------->YAB1                                --------->ICU4                     <--------ATHB1       --------------->AGL15    <---------YAB1               -----                    <---------ATHB51      <---------------AGL15  --------->YAB1                 <----          <---------ANAC46       <---------------AtSPL3        --------->ARR11(3)               ----- ---------YAB1      <---------ATHB12   <---------------AGL15   <---------ARR11(3)              <----- ------>YAB1      =====================================MADS_MADS<---------YAB1                 ------ ------ATHB51     <---------------AGL15--------------->AGL15  --------->YAB1          <---------HSFB2a(2) ------ATHB12   <---------YAB1   --------------->AtSPL3   --------->MYB46(3)          --------->HSFB2a(2)   ttatgttatgcgtcgtttatcaataataggtagtagtagtactactagtagtagcattcaacaaatatcattattagtaactagaagtctagaagtcatt  22711700              <---------MYB52(1)   ------>ZmHOX2a(2)  <---------At4g35610  --------->At4g35610  <----------DOF2 <---------AGP1 <---------ARR11(3) ---->ATHB51  --------->DOF5.7(2) -----ICU4   --------->TOE1(3)                   --------->LBD16 ---->ATHB12 --------->TOE2(3)                  <---------HSFB2a(2) ----YAB1  <---------TOE2(3)                    --------->HSFB2a(2) --->ICU4 <---------DOF5.7(2)      ---------->DOF2            --------->YAB1   attgatctgagtaaacgttatcttccttttgtttcttaaaagataacaatccagaaataacaaataatagggccaattctaacatgtcattttctgaatt  22711800                                             ------>ZmHOX2a(2)                                             =============HOX2a_HOX2a                          ------                                            <------ZmHOX2a(2)                          --------->YAB1                                            ==============HOX2a_HOX2a              <---------YAB1                                           <---------AGP1                      --------->AHL20(2)                                           --------->AGP1                      --------->YAB1  <-----      ------>MYB83                         <---------ARR11(3)             <---------YAB1       ======      ------>MYB46(1)                      --------->ARR11(3)       --------------->AGL15     -------    --------->TOE2(3)               --------->ICU4 <------ZmHOX2a(1)=================================    <---------MYB59      <---------YAB1  --------->MYB59         <-----------GT1--------->AHL20(1)   tgataacctaattttcttagatgatttatgactatgtaatagttagatctataggagttttttttttttaccatttatgaataatattatcagcatgcct  22711900                                                 <---------AHL20(1)              ----------->RAV1(1)                --------->AHL20(1)            <---------At5g28300                  --------->AHL20(2)           <-----------GT1                      --------->YAB1 --------->HSFB2a(2)                        --------->AHL20(2) <---------HSFC1(1)                     ----------->GT1                                 <-----------GT1 --------->HSFC1(1)                  ---------->DOF2                               <---------AHL20(2) <---------HSFB2a(2)              --------->ANAC58<---------AHL20(2)               --------->AHL20(2) --------->AGL15                  --------->ANAC58--------->AHL20(2)              --------->AHL20(2) ----------AGL15                  --------->ANAC46<---------YAB1               <---------AHL20(2) ================================================MADS_MADS     <----------DOF2<---------YAB1 ---------->AGL1                 <---------------AGL15  <---------At5g28300  <---------AHL20(2)    -- ==========MADS_MADS             --------------->AGL15 <-----------GT1     <---------AHL20(2)      <-   catctagaagcatttaccacagataaatccacttacaagaaaaggaataaatataatttaccactcttttcatctatatttttatttaattttcaactta  22712000                                                                            --------->DAG2                                  --------->AHL20(2)            --------->YAB1                              ----------->GT1      <---------ANAC46 --------->DAG2                            ----------->GT1       --------->ATHB12 ---------->DOF2                <--                         <---------ICU4        <------------CBF<---------YAB1            <---------DAG2                         --------->MYB52(1)----------->HVH21   --------->ICU4            <----------DOF2       <---------MYB52(1)--------->YAB1---------->DOF2       --------->YAB1---------->DOF2       ---- ------->AHL20(2)       <---------ATHB12 ----------->GT1   --------->AHL20(2)--------->DAG2      <--- --------AHL20(2)       <---------ATHB51--------->DAG2----------->GT1  <----------ID1  <-------TEIL--   tataattctgttttgttcacaaacaaataatggtgaaaaaataaagtgacattgtttggaaaataataataaagggaaaaaggtagaggtgctttttggg  22712100          <----------DOF2     ------>ZmHOX2a(2)    <------ZmHOX2a(2)    *TSS --------->TOE2(3)   --------->ARR14(3)   <---------ARR14(2)   --------->ARR11(3)   <---------ARR14(3)   <---------ARR11(3)   <---------GLK1(2)   <-----------ARR10                                                  <---------AHL20(2)   <---------AGP1                                                    --------->AHL20(2)   --------->AGP1                                                 <---------HSFB2a(2)    <---------ARR14(2)   --------->ARR14(2)                                             --------->HSFB2a(2)    --------->ARR14(2)  <---------CCA1(2)                                             <---------------------WRI1 ----ZmHOX2a(2)                                             <---------AHL20(2)          ------>MYB83 ----->ARR14(2)                                            --------->AHL20(1)           ------>MYB46(1) ------ARR14(2)                        <---------MYB52(1)  <---------AHL20(1)----------->GT1       <- ---->ZmHOX2a(2)      <<<<<<<<<TBF1   <----------DOF2   --------->AHL20(2) ---------->DOF2         --   atccagatcttcctttactacttcttcttctctctctctcctttggtttgctctgtttttatatatttctataaaatcaaagtaaaaaccaaatccatgg  22712200                                                                                         <---------GLK1(2)                                                                                       ----------->ARR10                                                                                    --------->TOE1(3)                                                                                   --------->ZAT6                                                                              --------->ANAC55(1)                                                                              --------->ANAC58                                                                              --------->ANAC58                                                                              <---------TGA1a                                                                              --------->TGA1a                                                                              <---------O2                         <---------ALFIN1                                     --------->O2--------->GLK1(2)                       ------->TEIL                                           =======================                      <---------ALFIN1                                        --------->bZIP60(2)                     ------->GAMYB                                            --------->ANAC46<------                    --------->ANAC46                     ------>ZmHOX2a(1)    --------->ANAC55(2) --------ARR14(2)   --------->ANAC58               <<<<<<<<<TBF1              <---------ANAC55(2) ------->ARR14(2)   --------->ANAC58            <<<<<<<<<TBF1    ----------------------->TaNAC69(2)   ggttcttcgcttcacaatcccaacgcacctctctctctatctctcacttcttcttcttcctctccctcttcaccaatgccacgtaaccctagattctgct  22712300                                                                                              -------                   --------->ANAC46                                                           <------            <----------DOF2<----------DOF2                                             <---------GLK1(1)   ------>ZmHOX2a(1)   ------>ZmHOX2a(1)                                               --------->GLK1(1) ======================bZIP_DOF                                               ------>ZmHOX2a(1) ---At4g35610    <-----------GT1                 <-----------GT1            <-----------------AGL1   tcttcctcttccttctttttcactcctctcttttcttctccatcccctgtttttccatagacgaacagggtctagctctcctctcatggaaatctcagtt  22712400                  <---------ARR11(3)                       --------->ALFIN1         --------->ARR14(2)                              <---------ANAC58         <---------ARR14(2)                              <---------ANAC58           --------->WRKY18(1)       --------->LBD16                                  <---------MYB46(3)         <-----------HVH21     <---------LBD16                        <---------ARR14(2)               ---------->DOF2       <- <---------ARR11(3)           --------->ANAC58    <-----------HVH21         ------->GAMYB         --- --------->ARR11(3)         ---------->DOF2 --------->ARR14(2)             <---------MYB52(2)   ----- -->At4g35610  <---------DAG2<---------GLK1(1) <---------ANAC58            --------->ANAC58 <-------- ---At4g35610  <----------DOF2--------->ANAC58 <---------ANAC58            --------->ANAC58<---------LBD16   gaacatctccggagacgctttatcttcttggaaagcctccgaatcgaatccttgtcaatgggtgggaatcaaatgcaacgaaagaggtcaagtctcggag  22712500                                            <---------HSFB2a(1)                                            --------->GLK1(1)                                            <---------GLK1(1)                                            --------->HSFB2a(1)                                           --------->ARR14(2)                                           <---------ARR14(2)                                           ------->TEIL                                      ------>NtERF2                                     <---------DEAR3(1)                                     --------->DEAR3(1)                                     ----------->HVH21                                    --------->RAP2.3(1)                                   --------->LBD16                                   --------->ANAC46                                  --------->ATERF1(2)                                  <---------ATERF1(2)                                 <---------LBD16 ------>NtERF2                                <---------DOF5.7(2)                                     <---------MYB52(1)                                --------->MYB52(1)                                     --------->LBD16        --------->ANAC58      <---------MYB52(1)--------->ANAC46                      <---------ANAC46        --------->ANAC58      --------->DOF5.7(2)----------->RAV1(1)        <---------ZAT2 ------->TEIL        --------->bZIP60(2)  <-----------HVH21  <---------ETT(1)            --------->At4g35610 ------TEIL                  <-------GAMYB --------->GLK1(2)    ----------->HVH21 --------->MYB46(3) ------>CCA1(2)             --------->MYB52(2)  ----------->HVH21   <----------DOF2--------->TOE2(2) ---->GLK1(1)   <---------GLK1(2)--------->DEAR3(2)      --------->DAG2     <---------At4g35610 -ANAC46--------->ANAC46   <-------TEIL<------NtERF2    ---------->DOF2     --------->ZAT2<---------CCA1(2)   atacaactccaagtcatggattttcaaggtccgttaccggcgacgaatctccgacagataaagtctctgactttgctcagcttaacctccgtgaatctca  22712600  Previous    Next  AGI:  At5g56040.1    Description:  leucine-rich repeat protein kinase, putative. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G24240.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G26540.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G48940.1); similar to putative receptor protein kinase [Oryza sativa (japonica cultivar-group)] (GB:BAD10022.1); similar to hypothetical protein OsI_028697 [Oryza sativa (indica cultivar-group)] (GB:EAZ07465.1); similar to hypothetical protein OsJ_026668 [Oryza sativa (japonica cultivar-group)] (GB:EAZ43 Range:  from: 22712104    to: 22715854    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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