Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               --------                                                                                         <---------TOE2(3)                                                                                         <---------TOE1(3)                                                                                   --------------->AGL15                                                                                  ------>ZmHOX2a(2)                                                                                 --------->GLK1(1)                                                                                 <------ZmHOX2a(2)                                                                                <---------ARR11(3)                                                                                --------->ARR14(2)                                                                                --------->AGP1                      ---------->DOF2                                           <---------AGP1                  --------->WOX13(1)  ---------->DOF2                ----------->GT1    <---------DOF5.7(2)                <---------ATHB12 --------->AtLEC2                  <---------TOE2(3)    ---------->DOF2         ----------->HVH21--------->ARR11(3)        <---------AHL20(2)          <---------ARR14(2)  <-----------ARR10  --------->AHL20(2)--------->DAG2          <----------DOF2  --------->ARR11(3)  > ->GT1   <----------ID1   <---------ARR11(3)       <---------YAB1  <---------TOE1(3)  --------->DOF5.7(2)   atcaaatctaagtgacaaatcaattaaagctcttcatgcaaaaagtttggatttttattttgagtctttaagggtaaaaacagatctcgttaaagtaaag  22659200                                    --------->ANAC58                                    --------->ANAC58                            <---------ARR14(2)                            --------->ARR14(2)                            <---------AGP1                            --------->ARR11(3)                   --------->ARR11(3)       ----------->GT1<----------DOF2  --------->GLK1(2) -->DOF2           <---------ARR11(3) --------->YAB1        ---------->DOF2          <----------DOF2 >>>>>>>>TBF1  ---------->DOF2------>ZmHOX2a(2)         --------->LBD16  ---------->DOF2   aagaagaagaggcaaaataaagaacttttggatctagcaagaatcagagaataaaacccagaaaaagaagaaataaaaagaacagagctttagagagaga  22659300                                           <---------ARR11(3)                                  ---------->DOF2                                ----------->HVH21                            --------->HSFB2a(2)                               --------->TOE2(3)                             <---------HSFB2a(2)                              <---------ANAC55(2)                         <----------DOF2                              ----------------->AGL1                      <---------DAG2                              --------->At4g35610                    --------->GLK1(1)                              ----------->RAV1(2)                    <---------GLK1(1)                              <---------ANAC46                      <---------ARR14(2)                           --------->DOF5.7(2)                      --------->ARR14(2)                           <---------MYB52(1)                   --------->ANAC55(2)          <------ZmHOX2a(1)                     <---------AHL20(2)    --------->ARR11(3)   <---------ANAC55(2)  --------->MYB52(1)                    <---------ATHB12       <---------GLK1(2) <------ZmHOX2a(2)      ---------->DOF2                    --------->AHL20(2)   ----------->ARR10  <---------ARR11(3)   --------->ANAC58               --------->ANAC58--------------->AGL15        --------->ARR11(3)   --------->ANAC58               --------->ANAC58--------->TOE1(3)        ---------->DOF2  <---------DAG2    ----------   gagagagagagagagagacccaataaatcgttacctgaaagtgaagatttttgagcgataaagatcacgagatacccttttcgaagcaaagggaaggaga  22659400                                                                                                    -                                                                                                  <--                                                                                              <------                <------ZmHOX2a(1)                                                         <---------ANAC58          ------------------------>ANAC81                                 <---------REM1(1)   <------        ---------->DOF2                                            ---------->DOF2    <---------At4g35610 -------------->ANAC81 ---------->DOF2                   <---------ZAT14  ----------->GT1 <---------ANAC58   agtagaagaaaaaaggaaggagagggaaagagagagaacagtcactgttcatgtaaggctgtagagagagaaagagatgtaagaacacatctgcttgctt  22659500                                                                                *TSS -------->AtLEC2                                                               ---------->DOF2 -------AtLEC2                                                              --------->AtLEC2 ---ANAC58                                --------->ALFIN1         <---------ANAC46 ---ANAC58                         <------ZmHOX2a(1)              --------->MYB59           <------ZmHOX2a(1)   ccatggaaatggggatagatagagagagggagagagaggagagagtgttgttaagagagagagagaattgggtctaccatgaaaagagggaagaggagag  22659600                                                               <---------AHL20(2)                                                               ------------>CBF                                                           --------->ATHB51                                                           --------->AHL20(2)                                                           <---------AHL20(2)                                                           <---------ICU4                                                           -------->ATHB1            --------->DAG2        <---------AHL20(2)       <--------HAHB4           ---------->DOF2    <---------AHL20(2)          <---------ATHB51            ---------------        --------->AHL20(2)   <---------AHL20(2)       ------------>CBF------->TEIL    ===============  <-----------HVH21    <---------DAG2  <---------AHL20(2) --------->ICU4 <---------AHL20(2) ----------->GT1       <----------DOF2<---------AHL20(2)  <---------ATHB12            <--------------   agagggtcaaataaaaagttgaatacttttttttattttttttattttgagggaatttcaattatttcaatgtatttttttttgttttctccaaaatgga  22659700                                       <---------AHL20(2)                                       <---------AHL20(1)                                       <---------ICU4                <---------YAB1                                       <--------ATHB1                <---------AHL20(2)                                       --------->AHL20(2)       ------>MYB83                                       --------->YAB1         <---------MYB59                                      --------->ICU4          ------->GAMYB                                    --------->YAB1           --------->MYB46(3)                                ----------->GT1             --------->ANAC58                              --------->ZAT2                --------->ANAC58                              --------->At4g35610<----------DOF2------>MYB46(1) >AGL15                       <---------ZAT2     --------------->AGL15 ================================================================MADS_MADS ---AGL1                      <---------At4g35610<---------------AGL15       <-------TEIL        ----   agacatatgtttacatcaagaatgctctcgcgagctgttaataattttaggctttttagggcaaccaaatttttattgatacatgttattgtatatttcc  22659800                                                                                              -------                                                                                           <---------ICU4                                                                                           -------->ATHB1                                                                                          --------->AHL20(2)                              --------->ATHB51                                            <---------AHL20(2)                              <--------ATHB1           <---------AHL20(2)              --------->AHL20(2)                              -------->HAHB4          <---------AHL20(1)              <---------AHL20(2)                              <---------ICU4          --------->AHL20(1)              --------->AHL20(2)        <---------DAG2       --------->AHL20(2)      <---------AHL20(2)       <---------YAB1 <-------        <----------DOF2      <---------ATHB51    --------->AHL20(2)       <---------DAG2  <---------ATHB51     <-----------GT1         <---------AHL20(2)--------->AHL20(2) --------->AHL20(2)<----------DOF2 -->ZmHOX2a(1)   <---------YAB1              --------->ICU4<-----------GT1<----------DOF2 --------->ICU4   tacatgtttactttatattttgattttctaaataattgtctatagaaatttttatatatatttaccaaaaaaattcctttttgattctttaaattattaa  22659900                  <---------YAB1                                         <---------ANAC58                 <---------AHL20(2)                                      --------->ANAC55(2)                 --------->AHL20(2)                                 <----------DOF2                --------->YAB1                                 ------->MYC3               <---------YAB1                                  <-------MYC3            --------->AHL20(1)             -------->ATHB1                                   <---------At4g35610      <---------AHL20(2)             <---------ICU4                                   --------->At4g35610      --------->AHL20(2)            --------->ICU4                                <-----------HVH21    --------->YAB1            <---------ATHB51                          --------->GLK1(2)  <---------ANAC58            --------->AHL20(2)                        ------->TEIL <---------ANAC46   --------->AHL20(2)        <---------AHL20(2)                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)        --------->AHL20(2)                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) -->AHL20(2)<---------AHL20(2)                        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) --YAB1--------->AHL20(2)       <---------CCA1(2)  <---------YAB1------->TEIL <---------YAB1 <-------   acacatcaatttaaattattaaaattcaacattcttatctttcatctattctcatgaatctgtcatgtgccttttacttgatgataaaaaaaattgatgt  22660000                                                                                                  <xx                                                                                             <xxxxxxx                                                                                      <xxxxxxxxxxxxxx                                                                                 <xxxxxxxxxxxxxxxxxxx                                                                               xxxxxxxxxxxxxxxxxxxxxx                               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                           --------->ANAC55(2)                        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                         <-----------GT1          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  <---------YAB1 --------->TOE2(3)<---------TOE2(3)--------->At4g35610     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ----- --TOE2(3)     <---------AHL20(2)  <---------At4g35610   <-----------GT1    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   ttacctctatgcataaatttatggattttacatatttagcttaagttttcacacgagtttttcagtttagcaattctaagtaagaactattgtgaatgca  22660100  Previous    Next  AGI:  At5g55910.1    Description:  protein kinase, putative. similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G47750.1); similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT4G26610.1); similar to hypothetical protein OsI_029565 [Oryza sativa (indica cultivar-group)] (GB:EAZ08333.1); similar to hypothetical protein OsJ_028605 [Oryza sativa (japonica cultivar-group)] (GB:EAZ45122.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45154.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (In Range:  from: 22657070    to: 22659580    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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