Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  --------->ALFIN1                                                                              --------->ANAC55(2)                                                                              <---------ANAC58                                                                              <---------ANAC46                                                                              <---------ANAC58                                  --------->ZAT6                              <---------ANAC55(1)                        <---------YAB1                                       <---------TOE2(3)             <---------YAB1<-------TEIL                                      <---------TOE1(3)-------  <-----------GT1     --------->YAB1             <-----------GT1            <---------DOF5.7(2) <----   agtttttccaaacttatgtttctattatgttcattaaaactactaaacattttaccaagtttttttttttttttttgttaacgtgttgtcttacataaaa  22654400                                                                                                  <--                                                                                             <-------                                                                                             --------                                                                                           --------->ICU4                                             --------->YAB1                                <---------YAB1       --------->AHL20(2)                   <---------ATHB12                             --------->YAB1       <---------AHL20(2)                 --------->WOX13(1)                          --------->YAB1 --------->TOE2(3)              <---------AHL20(2)               <-----------HVH21 --------->YAB1---- -->AHL20(2)                   --------->AHL20(2)            --------->GLK1(2)   <---------WOX13(1) -----ICU4              ------->TEIL--------->YAB1     <---------WOX13(1)     <---------YAB1---------   atttcttaaaaaattgtttacatatgagccttataaaatgatatcaatcatatgtagattgatattctgtcaccaagttgatgaatgatagtaatgatat  22654500 -------AHL20(2)--------->REM1(2)                                                      --------->HSFB2a(2) --ARR11(3)<---------ANAC46             ----------->GT1                                <---------HSFB2a(2) ->ARR11(3)<---------YAB1 ----------->GT1                         --------->YAB1 <---------AHL20(2) ----->AHL20(2) <-------GAMYB   --------->DAG2           ----------->GT1         --------->AHL20(2) < >YAB1     <---------ANAC55(1) ---------->DOF2         ----------->GT1--------->DAG2   <---------TOE2(3)   taaatacacgattatgtgtgttgacatgagataaaaagtgtatagaaaaatgtagaaatgagaaaaaatcaaaaggttagcatttatttatggaagtcga  22654600                                                --------->ALFIN1                                               <-------MYC3                                               ------->MYC3                --------->ATHB12                                              ===============================bZIP_DOF                                              <---------O2                 <---------ICU4                                              --------->O2                 <--------HAHB4                                              <---------TGA1a             --------->ICU4                                              --------->TGA1a             <---------YAB1                                            ------>MYB46(1)             --------->YAB1                                            ------>MYB83               <------ZmHOX2a(2)                                            --------->MYB52(1)        --------->ARR11(3)            <                                           --------->MYB55(1)         <---------ARR11(3)        <----    <----------DOF2                       <---------MYB46(2)      ---------->DOF2               <---- -----------GT1         ----------->GT1   <---------MYB59<-----------RAV1(1)--------->TOE2(3)<-------   tttcacctttgattttgttttccaaattgttaattgttggaataccaaacgtgtcgaaactgtggtacaaaagatcatcattagtcccataacacacact  22654700                <---------AHL20(2)                --------->AHL20(2)             ------->TEIL           <---------ZAT14       <-----------GT1      <---------YAB1                           --------->AHL20(1)    <---------ICU4  <---------AHL20(2)         <---------AHL20(2)    <---------AHL20(2)                         --------->AHL20(2)   --------->AHL20(2)                         --------->AHL20(2)   <---------AHL20(2)                         <---------AHL20(2) ---------AHL20(2)  --------->AHL20(2)    <---------YAB1                 ------>ZmHOX2a(1)         -- -----DAG2 --------->ZAT14   --------->At4g35610                         ============================ ------DOF2<---------ZAT18   <---------At4g35610   <-----------GT1 <<<<<<<<<TBF1                   == --ALFIN1--------------->AtSPL8       ----------->GT1    *TSS   <<<<<<<<<TBF1         <----------DOF2   ttttatttattactgtacttaattaataaacagcagaatatagtataattttattactctctcttcttcttcttcctcttctcaaaaactttcagtttcg  22654800                                                         --------->ANAC46                                                     <---------HSFB2a(2)                                                     --------->HSFB2a(2)                                                  <---------ARR11(3)                                                  --------->ARR11(3)                         <-------                                                 <---------CCA1(1)                         ------>ZmHOX2a(1)                                                 --------->CCA1(1)                      ------>MYB83                                                 <---------GLK1(1)                      ------>MYB46(1)                                                 --------->GLK1(1)                    --------->AtMYB61                                                 --------->RVE1(1)                   --------->ZAT2        ---------->DOF2                          <---------RVE1(1)                  ------>MYB83     ------>ZmHOX2a(1)  <-----------HVH21       <---------ARR11(3)         --------->HSFB2a(2) ---->ZmHOX2a(2)        --------->LBD16         --------->ARR11(3)         <---------HSFB2a(2)  <---- =====HOX2a_HOX2a  <----------DOF2       <---------At4g35610       <---------TOE2(3)------>MYB46(1) ===========HOX2a_HOX2a<---------ANAC46  --------->At4g35610   <----------DOF2     <---------ALFIN1   atctctcctaaaaagtttgaactttccgtcgaatcaaatgggaagcggaagatatctagacgaccctttaacatttactagaaacccaccttcctcgtcg  22654900                                                                                                  ---                                                                                                  <--                                                                                                  ---           --------->ARR14(2)                                                                     ---           --------->GLK1(2)                                  <---------PCF2                      <--           ------->TEIL                               <---------HSFB2a(2)           --------->ATHB12           <---------ARR11(1)                    <---------HSFC1(2)             <---------AtMYB61 <--           <-----------ARR10<---------ARR14(2)   <---------HSFB2a(1)      <---------DEAR3(1)      <--           <---------ARR14(2)--------->GLK1(2)   --------->At4g35610 <---------TOE1(1)    ===========    --------->MYB46(3)      <---------GLK1(2)    <---------At4g35610 <---------TOE2(1)   <---------ANAC58    <---------ATHB12      <---------TOE1(2)      <---------ZAT2 --------->At4g35610 <---------MYB46(3)    <---------MYB55(2)<---------HSFB2a(2)        --------->HSFC1(2)  <---------ANAC46 <---------WOX13(1)  --------->WOX13(1)  --------->HSFB2a(2)      <--------P  --------->ALFIN1 <------NtERF2<---------ANAC58 ----HVH21<---------ARR14(1)--------->ARR14(2)<---------MYB52(1)<---------At4g35610<---------YAB1 <-- -----ATERF1(1)   <----------DOF2  ------>ZmHOX2a(2)  --------->HSFB2a(2)<------ZmHOX2a(1)<----------DOF2   tctccaatcaccgaatctagctttctcgcagaatcgatctctcgctctggtagcttcgagagtgggagcttacgaggaggcgatggtgattgctttagcg  22655000                                                                                                 ---- ------>TGA1a                                                                                  ------ -------O2                                                                                     <----- ------>O2                                                                            <---------ANAC58 ------>DEAR3(1)                           --------->ANAC46                           <---------ANAC58 -------TGA1a                         --------->AGP1                             <---------MYB52(1) -------bZIP60(1)                 --------->ZAT14                            ------>MYB83      <----- -------ANAC46                    <---------ZAT14                            ------>MYB46(1)  <------ZmHOX2a(1) =======bZIP_DOF                <---------ZAT14   <---------ANAC58         --------->AtMYB61  ======= -------bZIP60(2)               --------->ZAT14   <---------ANAC58      <-----------GT1   <---------ANAC46   acgtcgatttcgcacttgataaactcgctgggactgtacagttctacgagaggcatgtcttcttgtgctacaaaaaaccatccgtttggcctgcgaggat  22655100    --------->At4g35610 --------->HSFC1(2) --------->HSFB2a(1)       <---------HSFC1(2) <---------HSFB2a(1)       --------->HSFC1(2) <---------HSFC1(2)        --------->HSFB2a(1) -->ZmHOX2a(2)    <-----------HVH21               <---------ANAC46 --->ARR14(2)    <---------MYB46(3)      <---------MYB52(1) ------ARR10    ------>ZmHOX2a(2)       <-------GAMYB ----ARR14(2)   ============================HOX2a_HOX2a               ---------->DOF2 ======================HOX2a_HOX2a   ------>ZmHOX2a(1)<------ZmHOX2a(1)    ----------->GT1  <--------   cgaagcttctgagtttgatcggttaccgaggcttctctcctccgttatatcggcgaggaagagtagtatgaagaaagaggtgattttgttttgagggaca  22655200                 <-----------GT1             <---------GLK1(2)           --------->LBD16                                    <---------AtMYB61          --------->HSFC1(1)                           <---------ZAT14          <---------HSFB2a(2)                          --------->ZAT14    <---------TOE2(3)                            <-----------ARR10   ---------->DOF2<---------At5g28300            <---------ARR14(2)  <---------AHL20(2)<-----------RAV1(1)          --------->GLK1(2) --ID1    --------->HSFB2a(2)                   <---------GLK1(2)              <---------YAB1   aaatttaaagttccagaatttactgtggtattaagtagccttaggtctgagaatctctgtagttttggtctccatgggtttgtgattctaacttagggga  22655300  Previous    Next  AGI:  At5g55900.1    Description:  sucrase-related. similar to sucrase-related [Arabidopsis thaliana] (TAIR:AT4G26620.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45151.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335); contains InterPro domain Sucraseferredoxin-like (InterPro:IPR009737) Range:  from: 22654757    to: 22656987    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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