Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          --------->ZAT14                                                                        <---------ZAT14                                                                       ----------->RAV1(1)                                                                      --------->ANAC46                            --------->ARR14(2)                        --------->bZIP60(2)                            <---------ARR14(2)                      --------->RAP2.6(2)     ------>ZmHOX2a(2)     <---------RAP2.6(3)               ----------->HVH21            --------->LBD16 -ARR14(2)        <---------ANAC58    <---------At4g35610--------->ARR11(3)             <---------LBD16 >GLK1(2)         <---------ANAC58    --------->At4g35610<---------ARR11(3)            ------>ZmHOX2a(1) >ARR14(2)        <---------ANAC46 ---------->DOF2--------->PCF5    ----------->RAV1(1)<---------LBD16   acattgatccactcagagttacgttgagccggtctgcaaaagctgatttgaggtcccaagaacttgacagccacaacacagttttcatcctcgggagaag  22637000                                                                                                  ---                                                                                                <----                                                                                                -----                                                                                     --------->ARR14(2)                                                                                     <---------ARR14(2)                                                                                    <---------CCA1(2)                                                                       <---------ANAC58        <-----                                              <---------ZAT6           <---------ANAC46        ------                  ----------->HVH21           ----------->GT1          <---------ANAC58  --------->At4g35610                  ----------->TGA1           <------NtERF2  <------NtERF2    <---------TOE1(3) <-----  <------ZmHOX2a(1)                   <---------ATHB12   <------ZmHOX2a(1)   <---------TOE2(3) ------   atgaggacattgacacattggtgacgatttgagtttggcaatgaggcagagttacaagaggaggcaagggaatgcgtttagggtttgtatccgatgcagc  22637100                                                                  ----------->HVH21                                                                  --------->ANAC58                                                                  --------->ANAC58                                                          --------->MYB46(3)                                                         ------>MYB46(1)                                                         ------>MYB83                                                         -------->P                                                        ------>MYB46(1)                                                      <---------MYB59       =====================================HOX2a_HOX2a ------>MYB83                              ---       <------ZmHOX2a(2)                              <---------MYB55(2)                          ---      <---------ARR11(3)                              <---------MYB111(1)                       <----      --------->ARR11(3)                             --------->ANAC58            --------->ATHB12 --- ------>LBD16                                        --------->ANAC46        --------->DOF5.7(2)<---- -----LBD16                                ---------->DOF2<---------ATHB12  <-------GAMYB       ----- ---->ATERF1(1)                      ------>ZmHOX2a(1)--------->MYB46(3)   <---------MYB46(3)   ----- ----ZAT2                        <---------SPL7      --------->ANAC58      ------>ZmHOX2a(2)    <---- >NtERF2                     <---------ANAC58       -------->P   --------->SPL7 <---------YAB1  <---- ----At4g35610               <---------ANAC58     <---------MYB111(1)     <------ZmHOX2a(2)    ------ --->ZAT2       XXXXXXXXXXXXXXXXXXXXX>MIR447A/B  --------->At4g35610     --------->ARR14(2) ---------   cgggtttagatcatcttggagacgaagtattccgtcgtcctgactcaaagtagctacccaaccatgggacgacccgatcgttaccattggattatccacc  22637200                                                                                  <-------MYC3                                                                                  ------->MYC3                                                                               <---------ALFIN1                                                                            --------->ANAC46                                                                           ------>ZmHOX2a(1)                                                                         ------>ZmHOX2a(2)                                                                       --------->AGP1 ----->P  --------->HSFB2a(1)       --------->At4g35610                <---------ARR11(3) --->MYB83<---------HSFB2a(1)     --------->ZAT14                      --------->ARR14(3) -----MYB111(1)                   --------->ZAT18                      --------->ARR11(3) --->MYB46(1)                     <---------ZAT14                      <---------GLK1(2) -----MYB111(2)              <---------ZAT14                           <---------ARR14(3) ---->MYB46(3)        --------->ANAC58                                 --------->ARR14(2) ---->AtMYB61         --------->ANAC58                                <---------GLK1(1) -----MYB55(2)        --------->ANAC46    <---------MYB52(1)          --------->GLK1(1) -----ALFIN1   <----------DOF2 <---------ANAC46        ----------->TGA1<---------ARR14(2) --->MYB46(3)  <---------------AGL15<---------At4g35610----------->HVH21<------ZmHOX2a(2) >MYB46(3)<---------HSFC1(2) --------->ZAT14 <---------YAB1         --------->LBD16               ---   aactccagaggcaccttcttttccaagtaagtgaagtgaactgcgttagcattgtaaatgacgagttttccgagatcctctccacatggaacagcgtcga  22637300                                                                            <---------GLK1(1)                                                                           <---------GLK1(2)                                                                   --------->HSFB2a(2)                                                                   <---------HSFB2a(2)                                                              ==========================HOX2a_HOX2a                                                              ------>ZmHOX2a(2)                                                             <------ZmHOX2a(2)                                                             ===========================HOX2a_HOX2a                                                            <---------ARR14(2)                                                            <---------ARR11(3)                               <---------YAB1               --------->ARR11(3)                     ------>NtERF2                          --------->ARR14(2)           --------->YAB1                     <---------RAP2.6(3)                    --------->GLK1(2)       --------->LBD16                     --------->LBD16                        <-----------ARR10      --------->ANAC46                    --------->RAP2.6(2)                     --------->ARR14(3)     <---------HSFB2a(2)                    --------->ANAC46                        <---------ARR14(3)     --------->HSFB2a(2)                   ---------->ID1                          <------ZmHOX2a(1)--------->GLK1(1)                   <---------LBD16   XXXXXXXXXXXXXXXXXXXX>MIR824 -------->P<---------ARR14(2)   -----           --------->LBD16--------->YAB1              ==============HOX2a_HOX2a   <---------LBD16       --------->ANAC46  --------->ICU4               ===============HOX2a_HOX2a ------>ZmHOX2a(1) ------>YAB1<------NtERF2<---------ATHB12             <------ZmHOX2a(1)    --------->ARR14(2)   <----   tgatggtacaaggcggagtttgccgcaatgaagatgataaaccattagagagaagaggagaggatcttaccagaacagatttcctccggaagcatagtag  22637400          ==========================MYC_MYB          <--------P         ===========================MYC_MYB         <-------GAMYB                                                                              <        <------MYB46(1)   <---------ANAC55(2)                                                      <-        <------MYB83      --------->ANAC55(2)                                             <----------        <---------MYB46(3)--------->TGA1a          --------->DAG2                        ------>MYB83       <---------AtMYB61  =========================bZIP_DOF                            --------->TOE2(3) --------->HSFB2a(2)      <---------O2            ---------->DOF2           ----------->GT1<---------WOX13(1) ---->HSFC1(2)            --------->O2  <---------DAG2              ----------->GT1    <---------MYB59 -----HSFC1(2)   --------->At4g35610    <----------DOF2      <------NtERF2---------->DOF2------>MYB46(1)   cttcgagggctggttgagaagcagagacatgtgactaaaatgctttttcagagaaagcgaggctgcaagagagtaagaaagaaaaaaaacctaattggtg  22637500                                                             --------->CCA1(2)                                                             --------->ARR14(1)                                                             <------ZmHOX2a(2)                                                            --------->ARR14(2)                                                            <---------ARR14(2)                                                            <---------ARR11(3)                                                            --------->ARR11(3)                                                            --------->ARR11(1)                                                        ---------->DOF2                                               <---------GLK1(1)                                               --------->GLK1(1)        --------->TOE2(3)                                              --------->ARR14(2)        --------->TOE1(3)           <                                             <------ZmHOX2a(1)------>ZmHOX2a(2)                     <                                <---------YAB1<---------ARR14(2)    <---------AHL20(2)             --            --------->At5g28300--------->AHL20(2) --------->At4g35610   --------->YAB1            <--           ----------->GT1  --------->TOE2(3)=======================HOX2a_HOX2a                   <--   <---------TOE2(3)--------->TOE2(3)        ========================HOX2a_HOX2a                  --- ---------WOX13(1)  <---------MYB59     <------ZmHOX2a(1) ----------->ARR10                    <----- -----------CBF    <---------ANAC55(2)  =============================HOX2a_HOX2a     <---------ANAC58 --CBF    --------->ZAT6  <-------TEIL  ============================HOX2a_HOX2a      <---------ANAC58   agattgatgttcacagtaaatacctaaatacattaatatagaggaaaggatttgctcacaaagatccgatataatcttaattcgatttcgttttaatcac  22637600      --------->ANAC46    --------->AHL20(2) ---------WRKY12          <---------AHL20(2) ---------WRKY38(1)      --------->AHL20(2) ------->WRKY18(1)  <---------ANAC55(2)                         >>>>>>>>>CBP60g ---------HVH21 --------->YAB1                    --------->TOE2(3)          <------------CBF ------ZAP1  --------->YAB1                     <---------ARR11(3) <------MYB83 ------>At5g28300   --------->ANAC55(2)         --------->ARR11(3) <------MYB46(1)           <------- ----At5g28300  -------->HAHB4         ----------->RAV1(1)      >>>>>>>>>SARD1         <-----------GT1   ggtcaaaccctccactaataatacatatttaatttttaaaacaacacataaatcttagtatatgaaatttggtttttcaaattggtgattcacatttttt  22637700                                                                  --------->ATHB12                                                              --------->ATHB12                                                             --------->ICU4                                                             <---------YAB1                                --------->AHL20(2)          <---------TOE2(3)         <---------TOE2(3)                                <---------AHL20(2)        --------->ICU4      --------->DAG2                          ------------>CBF             <---------YAB1        ---------->DOF2                        --------->ANAC46             ----------->GT1    <---------ANAC58 --AHL20(2)  --------->AHL20(2)--------->AHL20(2)    --------->YAB1     <---------ANAC58       ------   tctctcactgtttgataaaatagtatgcgccaatttaaatacgaactattttctatggtgataatgtttgatttgcttaaaaagtattttggttattgag  22637800                                                           ------->TEIL                  <---------WOX13(1)             <-----------GT1          --------->ARR11(3)               <---------MYB46(3)             ----------->GT1 ----->GT1<---------ARR11(3)        ------->TEIL<---------YAB1          <---------GLK1(1)   <--------   taaatctcattagatattagattgaaaacaatctcatgaatttgtttgttataactagacgagcctgactatggatttgtgaaattataggtttctttgt  22637900  Previous    Next  AGI:  At5g55880.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G55890.1); contains InterPro domain Protein of unknown function DUF295 (InterPro:IPR005174) Range:  from: 22636330    to: 22637430    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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