Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              <------MYB46(1)                  <------MYB83<---------ANAC46                  <------MYB46(1)                  <---------ANAC46                 --------->MYB52(2)                 <---------MYB46(3)                 --------->MYB55(2)                 --------->MYB111(1)                              <------MYB46(1)                 --------->MYB46(2)                               <------MYB83            --------->CCA1(2)                 <---------AtMYB61                               <---------TOE2(3)       <---------ARR14(2)                <---------MYB55(1)                     --------->CCA1(2)                 --------->ARR14(2)               <---------MYB52(1)--------->ETT(2)   ----------->GT1                      <---------ARR11(3)             <---------MYB46(3) <------NtERF2     <------ZmHOX2a(1)                      --------->ARR11(1)         <---------AtMYB61  <------MYB83   --------->ATHB12      --------->MYB59         --------->ARR11(3) <---------MYB46(3)    <---------RAP2.6(2)--------->ICU4     <------ZmHOX2a(1)         ----------->ARR10 ---------AtMYB61--------->MYB111(2)   <------ZmHOX2a(1) ---------->DOF2          <----------ID1  ---   tggtggtagagatggtcgtttggtggaggctggtgtcgagaggaatgagtgaggaagataaaaggattaggttttttggaaaatgggccaagatatgggc  22598500                                                                               <---------ARR14(2)                                                                               --------->ARR14(2)                                                                              <---------GLK1(1)                                                                              --------->GLK1(1)                                                                              <----------TaMYB80                                                                             <---------ARR14(2)                                                                             ---------->TaMYB80                                                                           --------->LBD16               <---------AHL20(2)                                        <---------LBD16              <---------AHL20(2)                                         ------>ZmHOX2a(2)              --------->AHL20(2)                                        <------ZmHOX2a(2)          <---------ICU4                                               --------->ARR14(2)         <---------YAB1                                                <---------ARR14(2)         --------->ICU4                                              --------->LBD16       --------->YAB1                                              ----------------->AGL1      <---------YAB1                            --------->YAB1     <-----------------AGL1     <---------ARR11(3)             --------->AHL20(2)             <---------LBD16 --------->LBD16     --------->ARR11(3)             ---------->DOF2           <---------ICU4 --------->ARR14(2)     <    --------->CCA1(1)              <---------ATHB12          xxxxxxxxxxxxxxxx>smallRNA(i)         ---    --------->RVE1(1)        <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   --------->MYB52(1)<-----------HVH21 -------->GT1--------->YAB1 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) <-----------GT1 <---------LBD16 <---   tggaaaatatcataattttaatttttagtatggcccaataaaacccataaacataaaacattgaatattaccggatccggatatccggtcatatttttta  22598600                                                                                                <----                                                                                               <-----                                                                                               <-----                                                                                              -------                                                                                             --------                                                                                           --------->LBD16                                                                                          --------->HSFB2a(2)                                                                                          <---------HSFB2a(2)                                                                                         ------------                                                                                         ------------                                                                                         <-----------                                                                                         <xxxxxxxxxxx                                         --------->ANAC46           <----------DOF2      ------------                        --------->AHL20(2)                         <----------DOF2       <-----------                        --------->AHL20(1)        <-----------HVH21--------->ARR14(2)   <xxxxxxxxxxxx                        <---------AHL20(2)  --------->ARR14(2)    <---------MYB52(1)   xxxxxxxxxxxxxx                  --------->CCA1(2)      <---------HSFB2a(2) --------->ARR14(2)        --------->ARR14(2)                 --------->ARR14(2)      --------->HSFB2a(2) <---------ARR14(2)        <---------ARR14(2)                <------NtERF2         <---------ARR14(2)    <----------TaMYB80       --------->LBD16               <---------MYB46(3)     --------->ARR14(2)    --------->GLK1(1)       --------->LBD16          --------->ATERF1(1)        <---------CCA1(2)      <---------GLK1(1)      <---------LBD16          <---------LBD16<---------ICU4  <xxxxxxxxxxxxxxxxsmallRNA(i)             xxxxxxxxxxxxxxxx>smallRNA(i)          ------>ZmHOX2a(2)         --------->LBD16        <---------ARR14(2)     ------>ZmHOX2a(2) <         <------ZmHOX2a(2)        xxxxxxxxxxxxxxxx>smallRNA(s)   --------->LBD16 <------ZmHOX2a(2)  -        --------->ARR14(2)        ===================================================================        <---------ARR14(2)        ----------------->AG     --------->ARR14(2)   --------->ARR14(2) --      --------->LBD16   <---------AHL20(1)--------->LBD16  ---------->TaMYB80------>ZmHOX2a(2)-------    <---------LBD16  --------->AHL20(2) <---------LBD16 --------->ANAC58    <------ZmHOX2a(2)--------  <-----------GT1<---------ARR14(2)--------->ANAC55(2) <---------LBD16 <---------LBD16xxxxxxxxxxxxxxx ---------YAB1<---------ANAC46    <-----------------AGL1--------->ANAC55(1)<---------ARR14(2)<------- ------>YAB1 <---------LBD16      ----------------->AGL1--------->ANAC58   --------->ARR14(2)<------- ------YAB1 --------->LBD16 <-----------GT1 <---------ARR14(2) <---------LBD16  <---------ARR14(2) <-   tgattatccggatccggcggatataaaatattactatccgtatccggaaccgtttcacacggatatccggtttttcggatcggatcccggttccagatac  22598700         --------->ARR14(2)      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     --------->LBD16     <---------LBD16    --------->ANAC46   <---------LBD16 -----ANAC55(2) --TEIL--------->LBD16 ----LBD16 -->ARR14(1) ->ARR14(2) ----->AGL1 ----->AGL2     <---------ARR14(2) ------AGL1     <---------ARR11(3) xxxxxxxxxsmallRNA(fl3) ----->AGL3   --------->LBD16 ------AG<---------ARR14(2) xxxxxxxxxxxsmallRNA(se3) xxxxxxxx>smallRNA(fl3)   --------->HSFB2a(2) ---------GLK1(1)         <---------HSFB2a(2) -------->GLK1(1)--------->GLK1(1) ======MADS_MADS--------->ARR14(2) ------->ARR14(2)<---------RVE1(1)         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)--------->AHL20(2) -->CCA1(2)  --------->LBD16             ----------->TBP               <---------GLK1(1) ->ARR11(1) <---------LBD16      <------------CBF                      --------->GLK1(1) xxxxxxx>smallRNA(se3)   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)         <---------ARR11(3)  --------->ARR14(2) --ARR14(2)------>ZmHOX2a(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)     --------->ARR11(3)  <---------ARR14(2) --GLK1(2)<------ZmHOX2a(2)--------->LBD16--------->ARR14(2)<------ZmHOX2a(1)   <---------AHL20(1) --------ARR14(2)<---------GLK1(1)     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     <---------AHL20(2)---   ggatacccgcggatcccggatatttgttccagggctattggctatatatgcaagagggagaaggagaagaaagatatcacaaaaaatttccaaatcccca  22598800                               ---------->DOF2                         <---------ARR14(2)           --------------->AGL15                  --------->ALFIN1                    <---------------AGL15                 <---------LBD16                     <-----------------AGL3                 --------->LBD16                     <-----------------AGL2                <---------ANAC55(1)                  ----------------->AGL3                 <--------                <---------ANAC46                     ----------------->AGL2            --------->ANAC58                <---------ANAC58         <------------CBF                              --------->ANAC58            <---------GLK1(1)<---------YAB1          <-----------------AG      --------->MYB52(1) --- ------>ATHB51  <---------ANAC58      <------ZmHOX2a(1)                    --------->ZAT6------->GAMYB   ttatcgaaaccatgagttccgtgggagtattttgaaaggaggaaattgatggaaaaccatttttggtatacacattaacacaaacagacaacccaaactc  22598900                                                                         --------->ANAC58                                                                         <---------ANAC55(2)     ----                                                                         --------->ANAC55(2)    <----                             <------NtERF2                               --------->ANAC55(1)  -------                     --------->GLK1(2)                                   --------->ANAC58   ---------                    --------->ARR14(2)                            ------>ZmHOX2a(1) <---------YAB1                    <---------ARR14(2)                     <---------AtLEC2 ------->TEIL    <-------- -ALFIN1--------->ATHB12<-----------RAV1(1)              <-----------GT1 --------->ANAC46  --------->ANAC46 --->ZmHOX2a(1)     <---------GLK1(2)                <----------DOF2  <---------ZAT18--------->YAB1   ctccagtgaatcactggccatggattctggtggccataaactccctcttcaacctcttttttcatgtcctagttcacgtatcaattttcataagcgcaat  22599000                                                                                                   --                                                                                                -----                                                                                                <----                                                                                                -----                                                                                                <----                                                                                               <-----                                                                                          --------->HSFB2a(1)                                                                                         ------->TEIL                                                                                         --------->ARR14(2)   --------->YAB1                                        --------->ANAC58                <---------ARR14(2) ----->YAB1                                              ----------->RAV1(1)             --------->GLK1(2) -----ATHB12                                             --------->ANAC58                <---------ARR11(1) -->WOX13(1)                                           --------->LBD16                   <-----------ARR10 >ZAT18                                         <---------ALFIN1          --------->ICU4<---------ARR14(1) -ZAT18                     <-----------GT1  --------->ANAC46---------->DOF2            <---------CCA1(2)   cacattgatggtcatgagactcaagagttttatccattcaattgttcccctcacttccccagcaaaagaaccagtactgatcaagaaggcgaatctttcc  22599100                                                                                         <---------ANAC46                                                                                         <---------ANAC58                                                                              --------->ARR14(2)                                                                              --------->ARR14(3)                                                                              <---------ARR14(3)                                                                              <---------ARR11(3)    -                                                                              --------->ARR11(3)   --                                                                        <-----------RAV1(2)       ---                                                                        --------->HSFB2a(2)  <-------                                                                 ----------->RAV1(2)     <---------ANAC58                                --------->ZAT14                 -------->P    <---------GLK1(2)  <---                               ------>ZmHOX2a(1)              --------->MYB46(3)       --------->ZAT14 <---------WOX13(1)      --------->HSFC1(2)                <---------ZAT14    <---------ARR14(2) <--- ------->ATHB12          <---------HSFC1(2)            <---------ALFIN1------>ZmHOX2a(2)--------->ALFIN1 ---------->AGL15        <---------HSFB2a(1)         ========================RAV      --------->ALFIN1 -----ANAC58             --------->At4g35610         ----------->RAV1(1)<---------HSFB2a(2) <-------TEIL ---->TOE2(3)            <---------At4g35610         ===============================RAV<---------ZAT14 -----ANAC58    <---------CCA1(2)      ------>ZmHOX2a(1) --------->ANAC46--------->LBD16<---------AtMYB61 ------------AGL1        --------->HSFB2a(1)<----------DOF2--------->ZAT14  ----------->ARR10<-------   ttgattgggacaacccttatatctgtaagcttcctgtagtccttctcttttggtgcaacactgaacaacctgatccagaagattttcggtgtggtgcatg  22599200    --------->SPL7   <------NtERF2  <---------SPL7 <---------ANAC58 <---------ANAC58 -------->ATERF1(1)               --------------->AGL15                                             < ---->NtERF2                 <---------AtLEC2                        ----------->ARR10          ----- ------>LBD16                <---------ANAC58                     <---------ANAC58    <------ZmHOX2a(2) --ANAC58                    <---------ANAC58                     <---------ANAC46    =============== ------ANAC58   <---------ZAT18   <---------ANAC46                <---------ANAC58   --------->ARR11(3) ------ANAC58   --------->ZAT14  ----------------->AGL1   ---------->DOF2            <---------ARR11(3) --ANAC58------->GAMYB     <---------YAB1              <---------HSFB2a(2)        <---------HSFB2a(2)   cgggcgtccaacgctcagtgcaacctattatgcatgccttatatgtgaaaaaatgttccacaaagaatgcgtagagtctccattcgagatcatacatcct  22599300                                                                  --------->ATHB51                 --                                                                  <---------ICU4                   --         <-----------GT1                                         --------->ICU4                    --     <----------DOF2                                             <---------MYB52(1)                --    <---------DAG2                                               <---------YAB1        <-----------GT1 ---------ALFIN1             --------->ARR14(2)               <---------YAB1          <---------YAB1 ->ZmHOX2a(1)                <---------ARR14(2)             <-----------GT1------->GAMYB   <---------ZAT14 ==HOX2a_HOX2a          -------->P                    <---------MYB46(3)  --------->ANAC46 --------->ZAT14   tcccacccttttcactctcttcgacttaccagttctccacagagtcaaaactgcatttgttgtcaccattatttcaacgacattttttatcactgttcta  22599400  Previous    Next  AGI:  At5g55790.1    Description:  unknown protein Range:  from: 22597896    to: 22598561    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g55800.1    Description:  DC1 domain-containing protein. similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G55780.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G10370.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G26550.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain Protein kinase C, phorbol ester/diacylglycerol binding; (InterPro:IPR002219); contains InterPro domain C1-like (InterPro:IPR011424); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain DC1 (InterPro:IPR004146); contains I Range:  from: 22598920    to: 22600656    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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