Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       <---------ANAC58                                                                     <---------ANAC58                                                                 <---------MYB52(1)                                                           --------->At4g35610                                       ------->TEIL        --------->ZAT2                           <                                   <---------TOE2(3)       <---------ZAT2                          --                                  <---------DOF5.7(2)   --------->At4g35610                        >>                                --------->DOF5.7(2)   <------ZmHOX2a(1)                            >>                           <---------MYB52(1)       --------->LBD16  <---------ANAC46              --                        ==========================HOX2a_HOX2a   --------->LBD16                    --         <-----------GT1<-------TEIL   --------->GLK1(2)<---------At4g35610                       ---       <----------DOF2  ------>ZmHOX2a(2)          <---------HSFB2a(2)                          <----       <---------DAG2   =====================================HOX2a_HOX2a                        -----    ------>MYB46(1)    ===========================HOX2a_HOX2a <---------LBD16               <--------    ------>MYB83       <------ZmHOX2a(2)           <-----------RAV1(2)                      ---------  <---------MYB59     <---------GLK1(2)--------->ARR14(2)  <---------At4g35610              <-------- --------->ANAC58     --------->ARR14(2)           --------->HSFB2a(2)                 <---------ANAC46 --------->ANAC46     <---------ARR14(2)        <---------ARR14(2)  <------NtERF2     <------NtERF2-- --------->ANAC58     --------->AGP1   <---------ARR14(2) ----------->ARR10         <---------DEAR3(1) ---->MYB46(1)       <---------At4g35610   ------>ZmHOX2a(1)--------->ARR14(2)      <---------ANAC46< ---->MYB83          --------->At4g35610 ----------->RAV1(2)<---------ARR14(2)     --------->At4g35610 ----->AtMYB61<xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)<---------LBD16 ------>NtERF2  --------->MYB52(1)< ------MYB59<---------ALFIN1  <---------YAB1    --------->ARR14(2) <---------MYB46(3)<---------RAP2.3(1)   caaacccaactttaccacctctcagatccgttatgttaacgaatcctgaggttccaggagcagctccggtggcttgaaacagagtagcggcgagagcaga  22577300          <-----------RAV1(1)         ------>ZmHOX2a(2)        <------ZmHOX2a(2)       --------->ARR14(2)       <---------AGP1       --------->ARR11(3)       --------->GLK1(2)       ------->TEIL      <---------CCA1(2)    --------->ANAC55(1)    --------->ANAC58    <---------ANAC55(2)    --------->ANAC58    --------->ANAC55(2)   <---------LBD16 ----------->HVH21 <------NtERF2 <---------REM1(2) <---------MYB52(1) -----------HVH21 ------->RAP2.3(3) >>>>>>>AtERF-3 >>>>>>>AtERF-4 ------->DEAR3(1)                                   <---------ANAC46 ------->RAP2.3(2)                               --------->ALFIN1 ------>RAP2.3(1)                               <-------PIF5 -----ARR14(2)                                  ------->PIF5 ---->ARR14(2)                                 <---------ANAC58 -ZAT14<---------ARR14(2)                      <---------bZIP60(2) >At4g35610                                    <---------ANAC46 -At4g35610                                    <---------ANAC58                                <----- ------->RAP2.6(2)                       ---------->DOF2                                  <----------DOF2 -----------TGA1                      --------->TOE2(3)                                   =========== ---------RAP2.6(3)           --------->LBD16<------ZmHOX2a(1)                           <-----------   gccgtcacggatctggtggagttttttggttccgaagtaatctaaaaggacgtggagggagagaatgtttttgagagttgagagtgtatagcctttagag  22577400                  <---------MYB52(1)                  --------->DOF5.7(2)                <---------ANAC46               <------NtERF2              <---------ORA47(2)              ------>NtERF2              <---------ERF1              <---------RRTF1(1)              <---------RAP2.3(1)             <---------DREB2C(2)             <---------RAP2.3(3)             <---------RAP2.3(2)             <---------RAP2.6(2)             <---------ANAC46             <---------DEAR3(1)         <---------TOE2(3)             <---------RRTF1(2)         <---------YAB1        <---------O2                    <---------TOE1(3)                 --------->ALFIN1        =====================================MYC_MYB                    <---------ANAC46        ====================bZIP_DOF --------->ARR14(2)          ------>NtERF2        <---------TGA1a              <---------MYB52(1)         <---------DEAR3(1)        <---------bZIP60(2)  --------->LBD16          <--------P<---------At1g77200     ----------->HVH21     <---------LBD16           <---------MYB52(1) --------->ALFIN1   <---------ICU4<----------DOF2     <---------ARR14(2)      <---------ANAC58   <---------At4g35610     --------->ZAT18           <-------GAMYB<------NtERF2 ----TOE2(3) <---------RRTF1(3) ------------>MYB.PH3(1)      <---------ANAC58   <---------ZAT6 =================bZIP_DOF <---------ZAT18          --------->LBD16   <---------ANAC46<------ZmHOX2a(1) ----AGL15  --------->RAP2.6(3) --------->MYB52(1)<---------LBD16<---------DEAR3(2) --------->MYB59   gttaatgctgacatggcggcgttatctactgcgcaaacggttatggttcttctccggttgatttcgtcggcgaggtgtgtttgtgttaggaaatggctga  22577500                                      --------->ALFIN1                               <---------ANAC58                               <---------ANAC58                               <------NtERF2                               --------->ANAC55(2)                               <---------ANAC55(2)                               <---------TGA1a------->PIF5                             <---------ANAC58 <-------MYC3                           <---------DEAR4(2) <-------PIF5                 <---------ANAC58   <---------bZIP60(2)                 <---------ANAC58   <---------ANAC46               <------MYB83<---------ATERF1(1)------->MYC2               --------->MYB55(2)----------->TGA1               <---------MYB46(3)----------->HVH21               <------MYB46(1)------>NtERF2<---------ANAC58              <---------AtMYB61--------->TGA1a<-------MYC2            <---------ANAC58--------->ATERF1(1)--------->ALFIN1            <---------ANAC58<------NtERF2  <---------ANAC58           --------->MYB55(2)<---------ANAC58 ------->MYC3           <---------MYB46(3)<---------ANAC46<---------ANAC58         <------ZmHOX2a(1)   <---------YAB1        --------->ATHB12  <---------DEAR3(1) <---------ANAC58   <------ZmHOX2a(1)      <---------YAB1       --------->ICU4    <------ZmHOX2a(1)<---------ZAT18   <---------ANAC46           --------->ICU4   aggaagagaatgatgggtggtttgctaggaggcgcgtgacgttgtgcgcgtgggtttgagttgtgaggagaaggagaatgttgaagatgatgatgagaga  22577600                                          <------MYB83                                          <------MYB46(1)                                          ----------->GT1                                         <---------MYB46(3)                                         --------->MYB46(2)                            *TSS                                         <---------AtMYB61                     --------->DAG2                                     <------MYB83                             ---------->DOF2                            <---------ZAT14                              --------->ARR11(3)                            --------->ZAT14    <---------YAB1            <---------ARR11(3)               <-----------RAV1(1)   <------MYB46(1)              <---------ZAT14 --------->ALFIN1           ----------------->AGL1   --------->MYB59        --------->ALFIN1 <----------DOF2    >>>>>>   actcatcttcttggccattgttggagagagtgaagagtttggtttggtgatttttgagagagtgtgagtgaagaagagcttaaagtgaggggatgaagaa  22577700                                              >>>>>>>>>ARR2                                              >>>>>>>>>ARR1                    --------->ICU4     <--                                 <---------MYB46(3)                       <---------bZIP60(1)--------                            <----------DOF2   <------------CBF     <------------CBF          <-------                        <-------PIF5        <---------YAB1        <---------AHL20(2)        ---------                        ------->PIF5  <---------YAB1             <---------AHL20(2) <---------AHL20(2)                       <---------ANAC58   <-----------GT1     <---------AHL20(2)   <---------AHL20(2)     <---------ANAC46  <---------ANAC58  --------->ICU4       --------->AHL20(2)--------->AHL20(2)<--  --------->ALFIN1    ------->TEIL  ----------->GT1   <------------CBF    --------->bZIP60(1)<------- >>>TBF1        <---------AHL20(2)<-------GAMYB    >>>>>>>>>>>>>>>>>LFY<---------YAB1<------------CBF   gaaggtggtgtttagtttttaatggacgtggtttttggttgtaattacgattgtgccattgtatttatttattgtgatgacattatttattgtatttatt  22577800                                                                               <---------STY1(2)                                                                               --------->STY1(2)                                                                              ------>MYB83                                                                              ------>MYB46(1)      <---------TOE1(3)                                                     <---------MYB111(2) <-----------ARR10                                                         --------->ANAC46       <-- -------ANAC58                                                           <---------ALFIN1       ----- ->ATHB12                                                             --------->ARR14(2)        <---- --ICU4<---------At4g35610                                            <---------TCP20          ------ >ICU4<---------TOE2(3)                                               <---------ARR14(2)       <----- -------ANAC58                 ----------->HVH21    <----------DOF2   --------->PCF2           ------ --AHL20(2)      <----------DOF2      <-----------HVH21          <---------LBD16               <-----   gcgaatttaagcttatgggcttttgcaagttttgtgaccatgtcaaatgctcttctttccagccttccacgggttccacctagctactattttagaaatt  22577900       <---------MYB46(3) -------YAB1                                                                   <------ZmHOX2a(1) --->ATHB1                                                             <---------AHL20(2) -----ICU4         --------->HSFC1(1)                                 <---------AHL20(2) --->AHL20(2)      <---------HSFC1(1)                                 --------->AHL20(2) ----ATHB51        --------->HSFB2a(2)                          --------->ANAC58 --->ICU4          <---------HSFB2a(2)                          --------->ANAC58 ----AHL20(2)  <----------DOF2                                  --------->ANAC46                 ----   attaaacgattgttgaactttctagaaaaatggaagtttttatgaactaggtatctatatatgtagacgaaattaaatataggatgaaacaagtgagaca  22578000                                                        --------->ARR14(2)                                                  <---------ZAT18                                           <---------AHL20(2)                  ---------->DOF2         --------->ARR11(3)          ---------->DOF2 <---------YAB1  <---------AHL20(1)    -------->ATHB1  --------->GLK1(2)--------->DAG2         <---------ARR11(3)    --------->ATHB51 ----->AtLEC2 <----------ID1              --------->AHL20(1)   <---------YAB1                      <-   tgctaatctttctaaagagaaaaagtttatgattcagaaattgatatatttgtgcccatatttgtattattgtggtctagtttcgacattaagcatcaag  22578100                                                               <---------LBD16                                                        <---------ICU4                                                        --------->ATHB12               <---------ALFIN1             <----------DOF2  <---------ANAC58            <-----------GT1           <---------ANAC58  --------->ATHB51          <---------ICU4       --------->ATHB51 ------>NtERF2--------->ATHB12  <---------YAB1           <---------AHL20(2)       --------->ATHB12--------->DEAR3(1)  --------------->AGL15   --------->ARR14(2)      <---------YAB1   --------->ANAC46<---------WOX13(1)    <---------ANAC58  --------->YAB1      --------->ICU4  --------->RAP2.3(1) ----------------->AGL1   <---------ARR14(2)      <---------MYB52(1)--------->At4g35610<---------------AGL15   <-----------ARR10 -----ZmHOX2a(1)    --------->DEAR3(1)<---------ANAC58 --------->ICU4  <-----------GT1    <----------DOF2   aggaaaccattatttgaccacatcgccgctacaaatgtttgattgcctttactagacattattgcttcggattttaccctataatattgatactttggta  22578200  Previous    Next  AGI:  At5g55730.1    Description:  FLA1. Identical to Fasciclin-like arabinogalactan protein 1 precursor (FLA1) [Arabidopsis Thaliana] (GB:Q9FM65;GB:Q8L8T1); similar to FLA2 [Arabidopsis thaliana] (TAIR:AT4G12730.1); similar to fasciclin-like arabinogalactan protein 10 [Gossypium hirsutum] (GB:ABV27481.1); contains InterPro domain Beta-Ig-H3/fasciclin (InterPro:IPR000782) Range:  from: 22575374    to: 22577687    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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