Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         --------->LBD16                                      --------->ANAC58                                           ----                                      --------->ANAC58                                         ------                                      --------->ANAC46                                         ------                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                    -------                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                    -------                                     --------->MYB46(3)                                       -------                            --------->TOE1(3)                                                 -------                            --------->TOE2(3)                                                --------                           ----------->GT1      --------->YAB1                               <-------                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                          <---------MYB52(1)                     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                          ----------->GT1                  ----------->GT1 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)          ------------>MYB.PH3(1)               --------->ANAC46<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   atacaactagaaattatacgtagaaaaaatcgttaaacacccgctaaaaatcatactataaaacacaatagtatacatagaaaaaccgttaaacacccgc  22555400    ----------->GT1 ----------->AGL15              --------->AHL20(2)                --------->YAB1 --->LBD16                 --------->LBD16                     --------->YAB1 >NtERF2                  --------->ANAC46               <---------AHL20(2) -->ANAC58                --------->ANAC58           <---------AHL20(2) -->ANAC58                --------->ANAC58           --------->AHL20(2)                     <-------- -->ANAC46               <---------LBD16            --------->AHL20(2)           ----------->GT1    - >GAMYB          <---------MYB52(1)                 --------->AHL20(1)        --------->ANAC46      < ->MYB46(3)    ----------->GT1  <---------AHL20(2)  <---------AHL20(2)   <---------YAB1------------>MYB.PH3(1) --MYB55(2) ------------>MYB.PH3(1)                 <---------AHL20(1)  --------->AHL20(2)-----------   caagtttagtaaaaaaaccgttaaacacccgcaaaaaattagtaagtatacaaatttattttatatgatcacaatattatacgtagaaaaaaccgttaaa  22555500   >>>>>>>>>E2Fc                                                                           <---------AHL20(2)   >>>>>>>>>E2Fd                                                                <---------MYB59  ------>NtERF2                                                                --------->ANAC46  --------->LBD16                                                          --------->CCA1(2) --------->ANAC58                                                          <------ZmHOX2a(2)        - --------->ANAC46                                                         <---------ARR11(3)      <-- --------->ANAC58                         <---------AHL20(2)              <---------ARR14(2)    ----- ------->GAMYB                           <---------AHL20(2)               --------->ARR11(3)    ----- -MYB52(1)                               --------->AHL20(2)               --------->ARR14(2)   <----- -------->MYB46(3)                     --------->TOE2(3)                  --------->AGP1   --------->AHL20(2) ---------MYB55(2)            --------->YAB1                        --------->YAB1      --------->TOE2(3) >GT1        --------->ZAT6  <------ZmHOX2a(2)                --------->YAB1------>ZmHOX2a(2)  ------   cacccgccaaatctaatactactaaatatcgatcataacttcattaaatgaaaaaaaaactcaaacataatattaagatctacataacttcattaaaatg  22555600           <---------AHL20(2)           --------->AHL20(2)      ------>ZmHOX2a(2)     <------ZmHOX2a(2)     --------->CCA1(2)    --------->AGP1                         ------>ZmHOX2a(2)    <-----------ARR10                     <------ZmHOX2a(2)    <---------ARR11(3)                   --------->ARR14(2)    --------->ARR11(3)                   <---------ARR11(3)                   <---------RVE1(1)    <---------AGP1                       <---------AGP1                      --------->AHL20(1) --------->DOF2                          --------->AGP1                      <---------AHL20(1) -------YAB1    <-----------GT1          --------->ARR11(3)                  --------->ARR11(3) ---->ATHB12 <---------YAB1              <---------ARR14(2)              ---------->DOF2 --->HAHB4 --------->ATHB51             <---------CCA1(2)            ---------->DOF2               <- ----YAB1  <---------ICU4              ----------->ARR10         ------->TEIL<---------ARR11(3)    -- --->ICU4 --------->ICU4          --------->AHL20(2)         <---------KAN4(2)<---------CCA1(1) <----   attaaagatctaattatttttcattttttggggcaaatatttagatcttctaatctaatagggaatgaactcaaagaaagatatttgtgtttgaagataa  22555700                                                                                    <---------TGA1a                                                                                    <---------bZIP60(2)                  <---------ANAC58                                                  --------->TGA1a                  <-------GAMYB                                                     <---------O2          <---------MYB52(1)                                                        <---------ANAC46         --------->LBD16                                                ----------->HVH21        --------->HSFB2a(2)             --------------------->WRI1      <---------ZAT14        <---------HSFB2a(2)   <-----------TGA1                          --------->ZAT14       <------       <---------LBD16   --------->ETT(2) --------->O2                 <-----------HVH21------------>CBF      ------->TEIL<---------ANAC58   <---------ARR14(2)            ------->TEIL     --------->O2    <---------ZAT14      <---------ETT(2) --------->ANAC46  <---------GLK1(1)    ----------->HVH21    --------->ZAT14   <---------ANAC46<------ZmHOX2a(2)  --------->ANAC58        <---------TOE1(1) --------ZAT14   <------MYB46(1)     --------->ARR14(2)  --------->ANAC58     <-----------HVH21 ------->ZAT14   <------MYB83 <-----------HVH21          --------->ANAC55(1)  <---------ARR14(2) -----ANAC55(2) --------->MYB59    --------->DEAR3(1)    --------->ANAC46     --------->ARR14(2)   gtaaactgtaccggaagttgggttgtgtctaccgtcaccgatccacgagagtatcgaacacgaaatctgaaccgttcacaggtccgacgtggcaataaac  22555800                                         <---------GLK1(1)                                       *TSS            <---------GLK1(1)                                    ---------->DOF2  <------MYB46(1)                             ======================HOX2a_HOX2a           --------->LBD16   =====================HOX2a_HOX2a       <---------ARR14(2)    ------>ZmHOX2a(1)       <------MYB83       --------->ARR14(2)   --------->TOE2(3)       <---------AtMYB61   <---------AHL20(2)       --------->TOE1(3)     <-------GAMYB  <-----------GT1   --------->AHL20(2)    --------->ARR14(2) ------>ZmHOX2a(2)<---------DAG2                 --------- -----GT1<---------LBD16 <---------ARR14(2)<------ZmHOX2a(2) <----------DOF2           --------->AHL20(2)   tgtatttaaaatccggttttgagtctgaatccttaatagaaagagatcggagcgttggtatcccttttttcttctctgattcgaacagaataaataagaa  22555900                                                                                    --------->ZAT14                                                                                    <---------ZAT18                                                                                    --------->ZAT18                       <----------DOF2                                              <---------ZAT14                --------->ZAT18                                                <----------DOF2              --------->At4g35610                                      <---------ANAC58            --------->DAG2                                          <----------DOF2<-----------GT1--- >YAB1     ---------->DOF2                          --------->GLK1(2)  <---------ANAC58      <-------   ccccaaaaaaaaaaaaagctcactgctttgaagcctttggatagcgaaggtgagattccaaagtcttctcctttcgagtctctttgtacactctgagctt  22556000                                                                                    <---------ANAC58                                                                                <---------ANAC58  <--                                                                                <---------ANAC58 <---                       <---------YAB1          <-------MYC2               <---------MYB46(3)     <---                     --------->YAB1            ------->MYC2              <---------WOX13(1)      <---   <----------DOF2 ------->TEIL                ------->MYC3             >>>>>>>>>ARR2   <---------HSFB2a(2) ------->ID1  <-------GAMYB     <---------ANAC46 ----------->GT1       --------->ATHB12 --------->HSFB2a(2) --ZAT2      <---------MYB46(3)<-------TEIL    <-------MYC3           <---------YAB1<---------ANAC58   gttctctttgtttagcggttgaatcttcatagcttcgtttatattcgcatgtggttttttttttttttggttttgattgttgtcttgcttcttgaagtcg  22556100   <---------TOE2(3)   <---------TOE1(3)                                      --------->MYB59 --------DOF2                                   --------->MYB52(2) ------ANAC46                     ----------->GT1         <---------TOE1(3) ------ANAC58                 --------->ATHB12<---------MYB52(1)                   <---------GLK1(1) ------ANAC58              <----------DOF2  <---------ZAT6<---------TOE2(3)     <---------YAB1 ------   cgtttagggtttgtgtttttttgtgttctctttgatttgtgaatttgtgttagtttagtttaggtttagagagagactaattttgatttctgtatgagct  22556200                 <---------AtMYB61            <---------MYB46(3)          <-------GAMYB    ------>ZmHOX2a(2)         <-----------RAV1(1)                                                  <-----------GT1       ===========================HOX2a_HOX2a                              <---------MYB46(3)       ------>ZmHOX2a(1) <---------AGP1                           <------ZmHOX2a(1)   <---------GLK1(1)<---------ANAC46             ---------->DOF2<---------TOE2(3) --->ARR11(3)  <XXXXXXXXXXXXXXXXXXXXXMIR850<-----------GT1<---------YAB1  <---------TOE2(3) ---------   cttggattcctctgttgttgtggtttggatctaaatctatgttttataccacaaagtattcagattgaggaaaattttggttacccttcgtttttgattt  22556300  Previous    Next  AGI:  At5g55660.1    Description:  GTP binding / RNA binding. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G26630.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G26630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45121.1); contains InterPro domain DEK C terminal (InterPro:IPR014876) Range:  from: 22555839    to: 22560700    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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