Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                    -                         --------->ANAC58                                --------->ANAC58         <--                         --------->ANAC58                                --------->ANAC46        <---            <---------ATHB12                                             --------->ANAC58       <----      --------->REM1(1)  --------->ANAC46                        ------>ZmHOX2a(1)              <---- -------->DOF2      --------->ZAT14                             --------->TOE1(3)               <---- --->HSFB2a(2)      <---------ZAT14     ------>ZmHOX2a(1)       --------->TOE2(3)              ------ ----HSFB2a(2)      <---------REM1(2)  --------->TOE2(3)    --------->WOX13(1)            ------>ZmHOX2a(1)   taaaagctacaccaatgaagtctacacaggccattgttgttccttaagactcaatgtttgatcaatccttaacccaagtaatctagtttttcctctagtc  22504800      --------->TOE2(3)     --------->ZAT6    <---------TOE2(3)    <---------YAB1   <---------DOF5.7(2) --------->DOF5.7(2) -------->TOE2(3) -------->TOE1(3) -------TOE1(3) ------DOF5.7(2) -----WRKY38(1)                                                             --------->TOE2(3) -----WRKY12                                                            <---------WRKY38(1) -----WRKY45                                             <-------TEIL  --------->WRKY18(1)         -- --->WRKY18(1)                                ---------->DOF2    --------->ATHB12          <---------   aacgttaacattagcctaaacacaaacttcagagtttaatagaaacttcaaagctaagtttcatcaacgattagtcaacctcgaattcaattactttgta  22504900                                                                                           --------->TOE1(2)                                                                                         ------------                                                                                    <----------------                                                                                   ------>NtERF2                                                                --------->ANAC58   --------->LBD16                                                                --------->ANAC58  <---------DEAR3(1)                                                               --------->ZAT18 <---------ARR14(2)                                                             ------->TEIL     --------->GLK1(1) -----                                                            ---------->DOF2   --------->At4g35610     --------->MYB52(1)      <-----------GT1              <---------ATHB12    <---------GLK1(1) ----- ------->AHL20(2) --------->AHL20(2)      ----------------->AGL3--------->ANAC46 <---------LBD16----- -DOF2        <------ZmHOX2a(1) --------->AtMYB61         <---------YAB1    <---------GLK1(2)<-------TEIL   atcaaataaacgaagaggaattaaaaaaaaaaaacctcaccatagccaaatacagagcccatgaatgcgccactagcagcatctccggcgaaacgtacaa  22505000           --------->At4g35610                                            <------MYB46(1)           <---------ZAT2                                        ----------->HVH21        <------NtERF2                                           <-----------TGA1       <---------MYB46(3)                                       <-----------HVH21       ------>NtERF2                                           <---------ANAC58      <---------ANAC46                                   --------->ATHB12 <------MYB83     <---------LBD16                                  <---------CCA1(2)  --------->MYB59 --------->MYB52(1)                                 --------->YAB1------------>AtMYB77 --->AtSPL3--------->ZAT2                         <-----------HVH21      <---------AtMYB61 -----WRI1 <---------At4g35610                   --------->WOX13(1)    <---------MYB52(1) ---->ANAC46                                --------->ICU4     <---------ANAC58                     - ---->ANAC58                <----------DOF2 <---------YAB1--------->TOE2(3)                         < ---->ANAC58         <---------YAB1       --------->YAB1<---------YAB1<-------GAMYB --------->YAB1 <-   gacaaacggcgggagcagggattaccaatgctttagaagaagagtcatgatcagtcatatcattagcgtcacggttaggttttgaatcggaatcgagact  22505100                                   <------NtERF2                                  <------NtERF2                                  <---------RAP2.6(3)                                  ------>NtERF2                                 --------->RAP2.3(2)                                 --------->RAP2.6(2)                                 --------->RAP2.3(3)                                 --------->ATERF1(2)                                 --------->DEAR3(1)                                 --------->DREB2C(2)                                 <---------ATERF1(2)                                 --------->ANAC58              <---------ANAC58   --------->RRTF1(2)              <---------ANAC46   --------->RRTF1(3)                                    ------>MYB83              <---------ANAC58   --------->ANAC58                                    <---------MYB59      --------->TOE2(3)         --------->SPL7                                       <---------MYB111(1) --------->DEAR3(2)             --------->RAP2.3(1)                        <---------ANAC58   <------ -------->ARR14(2)             <---------ATERF1(1)  <----------DOF2        <---------ANAC58   ------- ---------ARR14(2)             ------>NtERF2   --------->ARR11(3)       <----------DOF2------>MYB46(1) --------CCA1(2)        <---------GLK1(1)      <---------ARR11(3)    <---------ALFIN1<---------MYB46(2)   cgtatcgacgttaatagcgtttgaagaattctcggccgccatagcttaagacctctttgaagcttgaagacacactttcgttttctacctaatcttcaaa  22505200                                                                     ----------->RAV1(2)                                                                     --------->O2                                                                     <---------O2                                               <---------ICU4        <---------TGA1a                       ----------->RAV1(2)    <---------YAB1       <---------ALFIN1                     <-----------GT1        --------->YAB1        <------NtERF2                <---------DAG2              <---------ICU4     ------>NtERF2                 <-------                <----------DOF2            <-------TEIL------------>CBF       <---------ARR14(2) ---------AGL15<---------ANAC58          *TSS --------->ICU4--------->RAP2.6(3)            --------->ARR11(3) -------->AGL15<---------ANAC58    --------->ZAT6      <------NtERF2 --------->TGA1a  <---------YAB1   aattagaaacagagtttgcttttttacctgtagccaaacactatattcattatgggcctcaattcggcctcacttgggcctatatgttatgaagaaattg  22505300                          <---------AHL20(1)                          <---------AHL20(2)                          --------->AHL20(2)                       --------->YAB1                     --------->AHL20(2)                     <---------AHL20(2)                 <---------RVE1(1)                --------->ARR11(3)                <---------ARR11(3)             ----------------->AG                <---------GLK1(2)              ----------------->AGL1         <-----------TBP  --------->AHL20(1)   <-----------------AGL1         --------->AHL20(2)               <---------ANAC58 --------->ANAC58       <-----------TBP<---------AHL20(2)  <---------ANAC58 --------->ANAC58 -----CBF<---------AHL20(2)   ----------->GT1 <-----------------AGL1   cagaaacttatatatatagattttttaataaaatgtaagaacaggcctgcccaagatgggcaagaaattgcagaaattgcccaagaagtttttttgttct  22505400                                                                                <---------ANAC58                                                                                <---------ANAC58                                                                         ------>ZmHOX2a(2)                                                                        <------ZmHOX2a(2)                                                                        --------->GLK1(1)                                                                        <---------GLK1(1)                                                                       --------->ARR14(2)                                                                       <---------ARR14(2)                ----------->GT1                                        --------->ARR11(3)           <---------AHL20(2)                                          <---------ARR11(3)           --------->AHL20(2)                                          --------->AGP1        --------->YAB1                                                 <---------AGP1 ------>ZmHOX2a(2)        ----------->GT1           <---------ZAT6                       <-----------ARR10       --------->ICU4             --------->ICU4                       --------->ARR14(3)           <       ----------->GT1    ------->TEIL  --------->WRKY18(1)           <---------CCA1(2)            <-   tgaaatgaaatgataaatttgtaacatgaatcagtagtgatggtcatggtcttgatatatggctccaaactcagatctccatgcttgatcgtctgtatag  22505500                                   <---------YAB1                                 --------->YAB1                                <---------YAB1             <---------ALFIN1   --------->ICU4          --------->ANAC46    <---------At4g35610       <---------ZAT18       <---------YAB1       --------->ZAT18<---------ANAC46     <---------At4g35610 <---------ZAT14                             <---------YAB1                --     --------->At4g35610 --------->ZAT14                         --------->KAN4(2)                --- ---------YAB1     <---------ARR14(2)            XXXXXXXXXXXXXXXXXXXX>MIR838                  <------ ----------HVH21   --------->ARR14(2)  <-------TEIL   ------>ZmHOX2a(1)                       -------   ttgtcatagctcacaacaccggttctgtgttctgatgatgatacatgctcttcttcctcttcttgctcattctccttgaaccatgcctctaatgcagacc  22505600                                  <---------ZAT18                                  <---------At4g35610         <----------DOF2     --------------------->WRI1        <---------ANAC58    --------->ATHB12        <---------ANAC58  <----------DOF2                     <-----------GT1 --------->GT1           <---------ANAC58                  <----------DOF2 ------>LBD16            <---------ANAC58           <---------ANAC58 ---ARR14(2)       --------->ARR11(3)               <---------ANAC58 -->ARR14(2)       <---------ARR11(3)        <---------MYB52(1)   ctggtaatttgctttctgctagatattgcttcattgtgctcatttctgttttgtgcttactctttaacttctccatttgctgtttcaacttgtcattctc  22505700  Previous    Next  AGI:  At5g55510.1    Description:  P-P-bond-hydrolysis-driven protein transmembrane transporter. similar to mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein [Arabidopsis thaliana] (TAIR:AT4G26670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38859.1); contains InterPro domain Mitochondrial import inner membrane translocase, subunit Tim17/22; (InterPro:IPR003397) Range:  from: 22503652    to: 22505241    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g55520.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G26660.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38858.1); contains InterPro domain Kinesin-related (InterPro:IPR010544) Range:  from: 22505300    to: 22508492    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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