Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             --------->AHL20(2)                                                                    ----           <---------AHL20(2)                                                                  ------     ----------->GT1                                                                           ------  <------MYB83                                                                                -------  <------MYB46(1)                                                                          --------->ANAC58 <---------AtMYB61                                                                  <------MYB46(1) --------->MYB111(1) --------->ANAC58 --------->AHL20(2)                            <------MYB83<---- --------->MYB59     --------->ANAC58 <---------AHL20(2)              <------MYB83<--------P--------- --------P--------->ICU4        --------->YAB1    --------->AHL20(2)  <------MYB46(1)      --------->ANAC58   gagtaggtcgtaataaatgaagaacgcataactataaaaaataaatacacaaatatatgtaaaacaattgtttggtttctctaggttggagacaaccaat  22491100      <---------AHL20(1)      --------->AHL20(1)      <---------AHL20(2)     --------->YAB1     <---------AHL20(2)     --------->AHL20(2) <---------AHL20(2) --------->AHL20(2)                                                                      <-----------GT1 ----->YAB1                                                                           <---------ICU4 >MYB46(1)        --------->AHL20(2)                                                 --------->ICU4 >MYB83          <---------AHL20(2)                                       <---------AHL20(2) -->WOX13(1)    <---------AHL20(2)                                        --------->AHL20(2) -----ATHB12    --------->AHL20(2)                 --------->AHL20(2)     --------->AHL20(1) >MYB46(3)  <---------YAB1       <---------AHL20(2)<---------AHL20(2)    --------->AHL20(2)--------->ZAT6   caaaaaattatattctaatttaaaataaaacttatttagttatcccatgaaaattaaactcttgtattctcaaaaaaaaattgagtcaaaattacactcc  22491200                      --------->CCA1(2)                     <---------ARR14(2)                 ---------->DOF2                 --------->YAB1                <---------ATHB12                                            <---------AHL20(2)                --------->ICU4                                             --------->AHL20(2)    <-----------GT1  --------->ARR14(2)                                    <---------AHL20(2)   <---- --------->AHL20(1)  <---------ARR11(3)                                    --------->AHL20(1)   ----- <---------ARR11(3)  --------->ARR11(1)                   <---------YAB1   <---------AHL20(1)   <---- <---------AHL20(1)  --------->ARR11(3)            <---------AHL20(2) --------->AHL20(2)<---------TOE2(3)   caatattttctgtctgcaataaagatatggagacacattgaaaaacattttagtttatttatgaaaaaccaaaaaaataaaattttagttgatgttttct  22491300                                                                       --------->YAB1                                                                      <------ZmHOX2a(2)                                                                    ------->GAMYB      ----------->GT1                                               --------->YAB1  --------->ARR14(2)     ----------->GT1                    <----------DOF2      --------->YAB1----------->TBP--------->MYB46(3) ---------->DOF2                     <---------ARR11(3)   --------->YAB1   <---------AHL20(2)      -- ------DOF2                          --------->ARR11(3) --------->AHL20(2) --------->AHL20(2)     --- ---------->AGL15           --------->DAG2          <----------DOF2--------->MYB46(3)     <---------MYB52(2) -----------AGL15          ---------->DOF2      <-----------GT1  --------->MYB52(1) <---------ARR14(2)   ttttaaagtggaaaaatgtgtcaaaaacaaaaagtcgaagttcttttgttttcccttttaaaataatcaacgatcatataaattcgaatcccacaaacca  22491400                                                                              <------NtERF2                                                                              ----------->HVH21                                                                             --------->LBD16                                                                           <---------LBD16                                                                           <------NtERF2                                                                           --------->ATERF1(1)                                                                          <---------ATERF1(1)                                                                          --------->ABI4(1)                                                                         --------->ATERF1(2)                                                                         <---------ATERF1(2)                                                                         --------->DEAR3(1)                                                                         --------->RAP2.3(2)                                                                         --------->RAP2.3(3)                                                                         <---------DEAR3(1)                                                                        --------->ERF1 <---------TOE2(3)                                                                        --------->DEAR4(2)                                                                        --------->RRTF1(1)                                                                        --------->ATERF1(1)                                                                        <------NtERF2 <-----------RAV1(2)                                                                        --------->RAP2.6(1)                                                                        --------->RAP2.3(1)                                                                        --------->ORA47(2)                                                                       <---------RAP2.3(1)                                                                       <---------ATERF1(1)        <--                                                                       <---------ORA47(2)   <-------GAMYB                                                                      <---------DEAR3(1)   --------->MYB111(2)                                                              <------MYB83------>NtERF2<---------TOE2(2) ------->DAG2                                           *TSS  <------MYB46(1)------>NtERF2 <---------MYB46(3) ------->DOF2                                      <---------AtMYB61 --------->ATERF1(1)  <--------P   aaaagctctctctctctctctctctctctctctctctgagtaaatctcagtttttggtcgaagttggtgaagtcgccgccgggacaactcaggttgttac  22491500                                                      --------------->AGL15                                                      <---------------AGL15                                        --------->ANAC58                              ------->TEIL           <-----------------AGL2               --------->ANAC46               <---------ARR11(3)       --------->ANAC58    <-----------GT1            --------->ZAT14        --------->TOE1(2)    <---------ANAC58        <-----------------AGL3    <---------At4g35610        --------->TOE2(2)    <---------ANAC58        ----------------->AGL3 ------>ZmHOX2a(2)     <-- -------At4g35610            <---------AtLEC2 ---------->DOF2 <---------At4g35610 --------->At4g35610   agatgataaacatgcgagataatccaacaatgcatgtcttacaagcttcaaagtttctatttttagctcttattttgatccagttgctgtctactcaact  22491600                   <-------TEIL                                                                    --           ------>ZmHOX2a(2)                                                                      <--          --------->CCA1(2)                                                                  <-------          <------ZmHOX2a(2)                                                                --------->WOX13(1)         <---------ARR11(3)                                                              <---------MYB52(1)         --------->ARR11(3)                                                            <---------ZAT6         --------->AGP1                                                            --------->ZAT14---         <---------AGP1                  --------->MYB52(2)       ------>ZmHOX2a(1)<---------ZAT14---     ---------->DOF2                   <--------P <---------CCA1(2)   <---------AHL20(2)--------->At5g28300 --------DOF2 ---------->DOF2        <---------MYB46(3)  ------>ZmHOX2a(1)       --------->ANAC46<---   ctttgctcaaagatctaaaagtccatggcaaacactcactggttagtgtcttctatctccttcttctcctatttattcaatacccttcactgttaatcaa  22491700          --------->DAG2 ------->WOX13(1) -------AHL20(2)                                                                              <------ --ATHB12---------->DOF2                                  <---------LBD16       ---------->DOF2     < ------->DOF2        <----------DOF2            ----------->GT1              --------->AtLEC2 ------- ------>AHL20(2)<---------ANAC58                <----------ID1            <-------TEIL        ------- ------ATHB12   <---------ANAC58            ---------->DOF2          <---------------------WRI1 <----   taaatcagtagaaaagttgcttccttttgaatcgtttcatagaaatcaaagagaaaaatttgggggttttctgagtttcatccaaagaaaaatcgaagct  22491800                                                                                <-------GAMYB                                                                               --------->MYB111(1)                                                                               --------->MYB111(2)                                                                               <---------MYB46(3)                                                                               --------->MYB52(2)                                                                   <------MYB83--------->MYB55(2)                                                                   <------MYB46(1)                                                                 <---------ANAC46                                                               <---------MYB46(3)                                                              --------->ALFIN1 --------->ALFIN1                                                             ------->PIF5     <--------P ---HSFC1(2)           <-----------GT1              <---------YAB1<---------MYB46(3)    --------->ARR14(2) ---------YAB1  --------->ARR14(2)                 <-----------HVH21         <---------ANAC58 -->HSFB2a(1)   <---------GLK1(2)      --------->GLK1(1)     <-------PIF5<---------LBD16<---------ARR14(2) -->HSFC1(2)    <---------ARR14(2)     <---------GLK1(1)  <---------ANAC58   <-------GAMYB<-------TEIL ------DOF2 <---------At4g35610      <------ZmHOX2a(1)    <---------ANAC58   <---------ANAC58   ttcttataggtttcatcggattttgtttccatttttgtaggagatgctccccttgtcattgctcgtggtgggttttctgggttgttgccagattcaagtc  22491900                                                               ------->GAMYB                                                              <---------MYB52(2)                                                              --------->MYB46(3)                                                              <---------MYB46(2)                                                <---------ANAC58 <---------TOE2(3)                                                <---------ANAC58--------->MYB52(1)                                      <---------At4g35610     <---------MYB111(1)                                  ------>ZmHOX2a(1)       xxxxxxxxxxxxxxxxxx>smallRNA(se3)                                  <-----------RAV1(1)  <---------bZIP60(2)                       <---                                 <---------ANAC46 <---------ANAC46  ---------->DOF2     <---------ANAC58   <---------ANAC58             ----------->RAV1(2)    <---------ANAC46   <-------TEIL  <---------ANAC58   <---------ANAC58         <---------ZAT6   <----------DOF2  <---------MYB55(2)    <----------DOF2   tcgatgcttacagttttgtatcgcagactagtgttcctggtgctgttctttggtgtgatgtgcaactaacgaaagatgcaattggactttgcttccctga  22492000  Previous    Next  AGI:  At5g55480.1    Description:  glycerophosphoryl diester phosphodiesterase family protein. Identical to Probable glycerophosphoryl diester phosphodiesterase 1 precursor (GPDL1) [Arabidopsis Thaliana] (GB:Q9FJ62;GB:Q5XEZ7); similar to glycerophosphoryl diester phosphodiesterase family protein [Arabidopsis thaliana] (TAIR:AT1G66970.1); similar to protein kinase family protein / glycerophosphoryl diester phosphodiesterase family protein [Arabidopsis thaliana] (TAIR:AT1G66980.1); similar to MRH5/SHV3 (morphogenesis of root hair 5), glycerophosphodiester phosphodiesterase/ kinase [Arabidopsis thaliana] (TAIR:AT4G26690.1); similar to putative glycerophosphoryl diester phosphodi Range:  from: 22491456    to: 22495358    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version