Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      --------->YAB1                                                   <---------YAB1                                                 --------->YAB1          <---------ICU4                                                 <---------ICU4          --------->ATHB12                                                --------->ICU4           --------->ATHB51                                              ------>MYB83               -------->ATHB1                                        <---------MYB52(1)              --------->AHL20(2)                                       --------->At5g28300              <---------ATHB51        <---------ANAC58              --------->ANAC46    <-------GAMYB <---------AHL20(2)        <---------ANAC58            <---------At5g28300  <-----------RAV1(1) <---------MYB46(3)       ---------->DOF2     ------>MYB46(1)           --------->ICU4<---------DAG2 --------P              <---------AHL20(2)  <---------MYB59          <---------AHL20(2)         ----- ------GAMYB           <---------AHL20(2)   --------->TOE2(3)        --------->AHL20(2)    <--------- --------MYB52(1)      --------->AHL20(2)--------->ARR14(2) <---------REM1(1)         <----------DOF2 -----LBD16        --------->ICU4  <-----------GT1<-----------GT1<---------ZAT6    <-----------GT1   cggttgctgtgcgtgccagtactaatttaaaagaaattcaccgtaacctaattatcattctgttgtagttttaaattattgttttttacttttcttttgt  22482500                         <---------ANAC46                         <---------ANAC58               --------->YAB1                 <----------DOF2                        --------->TOE2(3)                       -----             ---------->ID1                            <---------ZAT6                         -------         <---------AHL20(2)         --------------->AtSPL8                                    ------- ----->ID1  <-----------GT1  <---------ZAT6            ----------->GT1                  <---------AHL20(2) -DOF2------->TEIL       <---------ANAC58       <---------ANAC46                  ------>ZmHOX2a(1)   cttaaatgtatttttttcgcttttgtttcttgtgttatttagtactagtattgtgtaatgttaatttgcattatactattactcctctaaataatcttct  22482600          --------->AHL20(1)          <---------AHL20(2)          --------->AHL20(2)          <---------AHL20(1)         <---------AHL20(2)    ---------->DOF2         --------->AHL20(2)<---------YAB1                   <----------DOF2   --------->ANAC58     <---------YAB1               <---------ICU4                              ----   --------->ANAC58    --------->TOE2(3)            --------->ICU4                               <--- ------>HVH21  --------->AHL20(2)                   <---------YAB1                --------->ANAC46 ---->RAV1(2)  <---------AHL20(2)                 --------->YAB1           --------->ICU4       ----- -->At4g35610 --------->AHL20(2)          ----------->RAV1(1)         ----------->GT1      <---------ATHB12   gacacaaacaattaaatttaaaaaacattataacaaagtcaaaacaacatagtcataatggtcttttaaacaatgtaatatttcaaacaacaaatcaatt  22482700                                             <---------DEAR3(2)                                             <---------RAP2.6(3)                                        ----------->HVH21                                       ------->MYC2                                       ------->PIF5              ----------->GT1                    -                                       <-------MYC3            <---------LBD16                   ----                                       ------->MYC3            <---------At4g35610               <---                                       <-------MYC2            --------->At4g35610              <----                                       <-------PIF5        <---------ARR14(2)                   <----           <-----------------AGL1     <---------ANAC58   <---------ANAC58                       -----     --------->ANAC58                 <---------ANAC58   <------MYB46(1)                        <----     --------->ANAC58                 --------->ALFIN1   <------MYB83                           ----- --------->YAB1                 ---------->DOF2          <---------ANAC58                       ----- ----->AHL20(2)             --------->MYB52(1)<---------MYB52(1) --------->LBD16             <------- ------AHL20(2)         --------->MYB52(1) <---------ANAC46--------->ARR14(2)           ---------->DOF2 ---->AHL20(2)         ----------->HVH21--------->ALFIN1--------->MYB59               <---------YAB1<   taaacataagcctttccaaatgggcctgacgaactgaagcgcgtggccggtatgtagttgggttctgcggaaaaaatgagaactacatatgaaagctttc  22482800         <---------GLK1(1)         --------->GLK1(1)    <---------LBD16    --------->LBD16  <---------LBD16 -------->ARR14(2) ----------->AGL15 ------------AGL15 -------------AGL3 -------------AGL1 ------------>AGL3 -------------AGL2                                        --------->ATHB12     <---------YAB1     <-- ------------>AGL1                      ---------->DOF2 --------->GLK1(2)    --------->YAB1       <-- ------------>AG         --------->ATHB12            ------------>CBF       --------->ICU4     ------ ---DOF2<---------ARR14(2)<------------CBF   ----------->GT1                <---------YAB1   -------- ---------ARR14(2)      <-------TEIL------------------------>ANAC81      <---------YAB1    ----------   catttctggggatttcgcatctcgagttcattgagggaaatggaaagaagaaaaaaacaatctttggaaagttttctaattataagagagaagagcaatt  22482900                                                                       <----------DOF2                                                                  ---------->DOF2                                                             <---------ARR11(1)                                                             --------->GLK1(2)                                                             ------->TEIL                     ----------->GT1   <---------ICU4        --------->ARR14(2)                   *TSS         --------->AHL20(1)           <---------ARR14(2)              --------              <---------TOE1(2) <---------AHL20(1)          <---------GLK1(2)          <---------YAB1 -------TOE2(3)    ----------->GT1 --------->AHL20(2)       <---------ARR14(1)        --------->ARR11(3) -------TOE1(3) <------ZmHOX2a(1)  <---------AHL20(2)       <---------CCA1(2)    --------->ARR11(3) --->ICU4     <---------TOE2(2)--------->AHL20(2)         --------->RAP2.6(2)    <---------ARR11(3) ->WOX13(1) --------->TOE1(2)--------->AHL20(2)         --------->At4g35610--------->HSFB2a(2)      < -->CBF     <---------SPL7 --------->AHL20(2)           <---------At4g35610<---------HSFB2a(2)   ----   agggtttttttggacgtaggaacgagaaaaaaaatatataaatatggctctgttcttcagccgaatctcaaagctttctgtaagatactatctttgttcc  22483000                                                    --------->AtLEC2                                                 <-------TEIL                                              <------MYB46(1)                                   <----                                              <------MYB83               <------ZmHOX2a(1)      -----      --------------->AtSPL8                 --------->MYB59           <---------TOE1(2)       <----- -->ID1     <----------DOF2               --------->ATHB12          --------->ANAC58           ------ -----------HVH21                     <---------TOE2(1)             --------->ANAC58         -------- -->ZmHOX2a(1)  <----------DOF2       <---------TOE1(1)    ----------->HVH21         <---------CCA1(2)   tatgtcatacagtactttctttgattcttggttactaagtccgatgtttggttcatggaaattgacagggacgcaggaacaatgctcgtttcttctcatc  22483100      <---------SPL7       --------->ZAT6                                                       -----     --------->DEAR3(1)----------->HVH21                                                        -----   ------>NtERF2       --------->WRKY38(1)                                                     <----- <---------ANAC58    --------->At4g35610               <------ZmHOX2a(1)                       ------ <---------ANAC58    <---------At4g35610           --------->LBD16                          <-------- -----ICU4        <------MYB46(1)                 <---------HSFB2a(2)                       --------- ---->ATHB12      <------MYB83                --------->GLK1(1)                <---------ARR11(3) ----YAB1      <---------ANAC58         <---------ANAC58         <---------ATHB12       --------->DEAR3(2) --->ICU4      <---------ANAC58         <---------ANAC46     <---------MYB59 --------->ANAC58  ------ ->YAB1       --------->ATHB12          <---------ANAC58--------->ALFIN1     --------->ANAC58 <------   attgcctccgtccccatgcttggtgctgaccactaagaagttgcgagggtctccagaggagggcctaatcgtgcatcacaagttattcgaaccggctacg  22483200        --------->ZAT18        --------->ZAT14        <---------ZAT14        <---------SPL7                              <---------ALFIN1               <---------DAG2      <---------------AtSPL3                     <---------ARR14(2)          <---------ANAC58      <---------------AtSPL8                     --------->ARR14(2)          <---------ANAC58    --------->DAG2                              --------->GLK1(1)           --------->MYB55(2)   ---------->DOF2                       <-------TEIL<---------At4g35610    <------MYB83 ---->LBD16                             <----------DOF2   <---------HSFB2a(2)<------MYB46(1) ------>GT1                          --------->ARR11(3)   --------->HSFB2a(2)<------MYB83 ----ANAC55(2)            <---------HSFC1(2)    <---------GLK1(1)           <---------MYB46(3) --->ANAC58       --------->YAB1     <---------ARR11(3)<----------DOF2      --------->MYB59 -ARR14(2) --------->ANAC46      ---------->DOF2--------->At4g35610         <------MYB46(1) >ARR14(2) --------->ANAC58 --------->ARR14(2)  <---------ZAT2            <--------P --->ANAC58--------->ANAC58 <---------ARR14(2)  --------->ZAT2 <---------HSFC1(2)  <----------DOF2 ---LBD16 --------->SPL7  --------->HSFC1(2)    <---------At4g35610    --------->DAG2           -----   gaaaaaaaagtgtacggcaatgagaagaagtatcccaaagagcttcatggagctccgcttctgggagcatcgaaaggttgggtcgcttttttcaaggaga  22483300                              --------->ANAC58                              --------->ANAC58                       ------>ZmHOX2a(2)                      <------ZmHOX2a(2)                     <---------AGP1                     --------->ARR14(2)                     --------->GLK1(2)                     ------->TEIL                    <---------CCA1(2)                  <---------ANAC55(2)                  --------->ANAC55(2)                  --------->ANAC46                  --------->ANAC55(1)                  --------->ANAC58                                                                  -                  --------->ANAC58                                                                  -                 <---------LBD16                                                                    -                --------->MYB52(1)                                                           <-------               ----------->HVH21                                       --------->ANAC58     ---------             --------->At4g35610                            --------->YAB1                 --------->ANAC58             <---------At4g35610                            <---------ICU4                 --------->ANAC58        <---------ZAT18--------------->AtSPL3              <---------YAB1                  --------->ANAC46       <---------ZAT6<---------ARR14(2)     --------->At4g35610        --------->ANAC58    --------->ANAC55(1) ----->DOF2 ------->TEIL      --------->ANAC46           <---------CCA1(2)                <---------LBD16   aagacattagtgtgcatctcacggatctgtacaagccttgtgtctcatctccaagagtcatatcattaccatcactcaagctcgactataaacccgcaac  22483400  Previous    Next  AGI:  At5g55430.1    Description:  contains InterPro domain WD40 repeat-like (InterPro:IPR011046) Range:  from: 22481815    to: 22482444    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g55440.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G67040.1); contains InterPro domain Protein of unknown function DUF295 (InterPro:IPR005174) Range:  from: 22482919    to: 22484435    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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