Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            ---------->DOF2                    ----------->HVH21           ----------->GT1                 xxxxxxxxxxxxxxxx>smallRNA(i)        <---------ANAC58                       <---------TOE2(3)             --------->LBD16  <------        <---------ANAC58 <---------HSFB2a(2)  ---------->DOF2               <---------HSFB2a(2) ----ICU4         --------->At4g35610    <---------ATHB12          --------->YAB1    <----------ID1 ---ATHB12   --------->ANAC46          --------->WOX13(1)   ---------->DOF2 --------->HSFB2a(2)     -   ttctgcgatggcttcacatcatatgacctagaaacaacatccaatcactaaagttaaaaaccaaaagaatgaaaactcccagagagaagaacaaaagacc  22471200                                                        <---------SPL7                                                        ----------->HVH21                           -                                                       --------->TOE1(1)                          <--                                                      --------->HSFB2a(2)                         ---                                                      <---------HSFB2a(2)                         ===              <---------ATHB12             --------->LBD16--------->SPL7    ------>ZmHOX2a(1)     ---          <---------ATHB12   ----------->GT1          <---------LBD16    ------>ZmHOX2a(1)        <--   <----------ID1 --------->TOE2(3)       <---------HSFB2a(2)       --------->ARR14(2)            --- ---ARR11(3)--------->WOX13(1)  <---------AHL20(2)<----------DOF2   --------->GLK1(1)        -------- --------->DOF2  --------->At4g35610      --------->HSFB2a(2)       <---------ARR14(2)       --------   tgaaaagcacaaatcaatcacctcaaacttctagttaatttctcccagagagctttctcggacgcttggggattcctcctaagaaactgaatggaatgca  22471300                                           <---------ARR14(2)                                           --------->ARR14(2) ---------->HVH21                        <---------DEAR3(2) -------TGA1a                           <---------TOE1(2) ------>TGA1a                    <----------DOF2              --------->AHL20(1) ===========================================bZIP_DOF          --------->AHL20(2) ------>bZIP60(2)               <---------ANAC58              <---------ARR11(3) -------O2                      <---------ANAC58    --------->TOE2(3)  ------>ZmHOX2a(1) ------>O2                   <---------CCA1(2)      --------->YAB1  <---------YAB1        <---------- ->ANAC58          <---------ICU4<---------DAG2------>ZmHOX2a(1)   <-----------GT1   <---------GLK1(1) ->ANAC58         <---------ATHB12     ------>ZmHOX2a(1)     <---------CCA1(2)       --------->GLK1(1)   acgtgaccaaaacagttctaatcaattccccatagcttttcctcggttcctcaagcttaatccatatattatccttcgtaagaacagaaatctcaggctg  22471400                                                                      --------->ANAC58                                                                      --------->ANAC58                                                                      --------->ANAC46                                                                ------>ZmHOX2a(2)                        --------->TOE2(3)                      =============HOX2a_HOX2a                        --------->TOE1(3)                     --------->AGP1                     --------->ANAC46                         <-----------ARR10                     --------->ANAC58                         --------->ARR14(2)                     --------->ANAC58                         <---------ARR14(2)               --------->GLK1(1)                              <---------ARR11(3)              ------->TEIL                                    --------->ARR11(3)              <---------ARR14(2)                              --------->ARR14(3)              --------->ARR14(2)                              <---------ARR14(3)              <---------ARR11(1)                             <---------CCA1(2)     --------->TOE2(3)             <---------ARR14(1)                        <---------MYB52(1) ----------->GT1--------->AtMYB61             <---------CCA1(2)                        <---------RAP2.6(3) --------->ANAC58           ------>ZmHOX2a(2)                          <-------GAMYB  ------>ZmHOX2a(1)  --------->MYB46(3)          <------ZmHOX2a(2)                       ------------>MYB.PH3(1) --------->ANAC58         --------->ARR11(3)                      --------->DAG2<------ZmHOX2a(2)   <---------MYB59 -RAV1(2)<---------ARR11(3)                    ---------->DOF2<---------GLK1(2)    --------->TOE1(3)   gaagttcgaaagatcgtatctccaagccttaacaagcttatgcagaggcaaaaggccgttatcagatcttcctcgcaagtaaaaacctaaaccactacca  22471500                                                                                      <---------YAB1                                                                                    <---------ZAT2                                                                                    <---------At4g35610                                                                                    --------->At4g35610                                                                            --------->ATHB12                                         --------->ANAC46                   --------->ATHB51             --------->ANAC58            --------->ANAC58                   -------->HAHB4             --------->ANAC58            --------->ANAC58                   <---------ICU4             --------->ANAC46          --------->MYB52(1)                   <--------ATHB1    <------ZmHOX2a(1)           <---------ALFIN1        --------->ANAC58       --------->YAB1   <---------ATHB51 <--------         ------>ZmHOX2a(1)         --------->ANAC58      <---------YAB1    --------->ICU4   <--------        --------->ANAC46        <-----------------------TaNAC69(2)         <---------YAB1<---------WOX13(1)  <----------DOF2             <----------ARF1        <----------DOF2     --------->YAB1--------->ATHB12   tcaactttctcctccacgctccattgaattgggagacgagcaaacgaaacaggctctttatcatcatcttcgaaataataattggaagctgattgaggaa  22471600                               --------->ANAC58                              ------->TEIL                             --------->MYB52(1)                           <---------MYB52(2)                           --------->MYB46(3)                         <---------DOF5.7(2)                        <---------WRKY12                        <---------WRKY38(1)                        <---------WRKY45                       --------->DOF5.7(2)                      <-----------HVH21                                                         -----                      --------->TOE2(3)                    --------->TOE1(3)                    ----- --------->ZAT14  <---------ICU4   --------->WOX13(1)     --------->ZAT6                 --------->MYB52(1) -------AtSPL8   <---------YAB1--------->ANAC58      --------->TOE1(3)                <------ZmHOX2a(2) -TOE2(3)  ------>ZmHOX2a(1)------->GAMYB            --------->TOE2(3)                ===============   cagagaagtcttcctcttcatcatcgtcaacgaacgtcattcaatcccaaaattcccttaaccctagagacgtttcaaaacacaaacgatcaaacgggac  22471700                                                             <------ZmHOX2a(1)         ------>ZmHOX2a(1)                           <---------ANAC58  <----------DOF2 ---------->DOF2                    <---------ANAC58          <------------CBF ---->ANAC58  --------->TOE2(3)                      <---------ANAC46    ------->TEIL         <------ ---->ANAC58  --------->TOE1(3)                <---------TOE2(3)       --------->YAB1   <---------ATHB12 ===============HOX2a_HOX2a                    <---------TOE1(3)  ------------>CBF  ------------>CBF   acaactttctcctaaaccctaaaagaaatagaaattcaaaactcgaattagggtttcgttttaggagacacaatgaacatgaattggacaatgaagaaga  22471800                                   <-------TEIL                                <------MYB46(1)                    <------------CBF                               --------------->AtSPL8          --------->ANAC58                             <------------CBF                  --------->ANAC58               ---------->DOF2 <---------------AtSPL8  ----------->GT1    ----------->RAV1(2)     --------->ATHB12         <------------CBF                      --------->ATHB12    <---------ANAC46  ------>ZmHOX2a(1)      <------------CBF  --------->ANAC46           --------->ICU4 ----ID1      <---------AHL20(2)<------MYB83--------->DAG2   --------->MYB52(1)         <------------CBF   cgaatagcctggacatttaaagtccttcaaagattggtacatccaaaaattgagaaattgagaaaacggaattgaagaagtaagcgaatgaattgattac  22471900                                                                                  --------->YAB1                         --------->TOE2(2)                             <---------ANAC55(2)                         --------->TOE1(2)                             --------->ANAC58                ----------->GT1                                        --------->ANAC55(2)               ----------->GT1      <-----------GT1                    --------->ANAC58        ------               <---------ZAT6      --------->YAB1                      --------->ANAC46   -----------             ----------->GT1 --------->YAB1      <-------GAMYB      ----------->TGA1---------->DOF2   gaagtagaagaagagaagtgataaaaacctatgagaattatcgtctctgtgtgttgatggagattatactatgacgcaattgaatcaaaagagagtaaga  22472000                                                                          <---------MYB52(2)                                                                          --------->MYB46(3)                                                                         --------->ANAC46                                                                         --------->ANAC58                                                                   --------->ALFIN1                                                                  <-------PIF4                                                                  ------->MYC4                                                                  ------->PIF5                                                                  <-------PIF5                                                                  ------->MYC3                                                                  <-------MYC3                                                                  ------->PIF4                                                                  ------->MYC2     <----------CDC5                                                                  <-------MYC2    <---------At4g35610                                                                  <-------MYC4    --------->At4g35610                                                                 --------->O2 --------->DEAR3(1)                                                                 ======================MYC_MYB                                                                 =============================MYC_MYB                                                                 <---------O2 --------->ANAC58                                                                 <---------TGA1a  ------>NtERF2                                    <---------AHL20(1)           --------->TGA1a --------->DEAR3(1)                                   <---------ICU4               ------------>OsbHLH66                                  <---------YAB1               <------------OsbHLH66                                  --------->ICU4               <---------ALFIN1------->GAMYB   <------ZmHOX2a(1)        <------NtERF2 <-----------GT1     <---------ZAT18 --------->ANAC46  ----------->GT1    --------->GLK1(2) <---------AHL20(2)    --------->ANAC58 --------->ANAC58 <---------TOE2(3)  <---------GLK1(2)<---------YAB1          --------->ANAC58>>>>>>>>>MYB2 --->ICU4     ----------->GT1 <-----------TGA1              ----------------------->TaNAC69(2) >GT1     ---------->DOF2 <---------DEAR3(1)       --------->AHL20(2)    --------->ANAC58           -   attgaggaaaaaaaaagagtaagaatcgtcgtcgtcattatttttttccaagtttatatactcgcgcacgtgtgcaagcaacgccgctgagattgtgttt  22472100  Previous    Next  AGI:  At5g55390.1    Description:  EDM2; transcription factor. similar to ELP1 (EDM2-LIKE PROTEIN1), protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G48090.1); similar to hypothetical protein OsI_027838 [Oryza sativa (indica cultivar-group)] (GB:EAZ06606.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61366.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38872.1); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011) Range:  from: 22465192    to: 22471640    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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