Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 ------>MYB83                                                               ------>MYB46(1)              ------>NtERF2                                                --------->MYB52(1)                         --------->ANAC58                                               ------->GAMYB --------->AtMYB61      <-----------GT1                  --------->ICU4              --------->MYB46(3)                 --------->ANAC55(2)        --------->TOE2(3)                     <---------MYB52(2)         --------->YAB1    --------->ANAC58  <---------ARR11(3)                       <----------ID1   --------->MYB46(3)   <---------ANAC55(2) --->ANAC58   --------->At5g28300       --------->ANAC58  --------->ANAC58       --------->ANAC55(1) --->ANAC58  ----------->GT1            --------->ANAC58  --------->ANAC58       ----------->GT1   acaagttctacctcaaggtaaatatggagacaatagagagccaagacaacaaaccgaggcaaaccatccctgtattcataaacatgtaacaagacgccca  22464700                                                     <------MYB83                                                     <------MYB46(1)                                                  --------->ARR14(1)                                                  --------->CCA1(2)                                                 --------->ARR11(1)                                                 --------->ARR11(3)                     <-----------------AG        --------->ARR14(2)                     <-----------------AGL1      <---------ARR14(2)                    <---------YAB1             ------->GAMYB                       <---------ARR11(3)        <---------ANAC58         -            --------->MYB46(3)                 ----------->ARR10           <---------ANAC58         -          <-----------GT1                 <------ZmHOX2a(1)              --------->ARR11(3)        --         <-----------GT1                <---------TOE2(3)              --------->HSFC1(2)   ---------        <---------AHL20(2)        <---------TOE2(2) --------->MYB59    <---------HSFC1(2)  <---------MYB46(3)   agaccaaaattttaacagccaaaacccatttaggcataggtttaggatgaagatttggtatcgcatttggagaagggtcttgtctgattttgatgggtaa  22464800         <---------At4g35610      <---------At4g35610                                                               --------->ANAC58 -------->ANAC58                                                                        --------->ANAC46 -------->ANAC58                           ---------->DOF2                              --------->ANAC58 ------->TOE1(2)                    --------->ALFIN1                          ---------->DOF2  ------ -->GT1  --------->At4g35610    <------ZmHOX2a(1)        ---------->DOF2   --------->TOE1(3) --------   acaagcgaagcagatgaaacgggagagttttggaggaagtgggaacaaaggtccctcatcaaaggcaaatagaagaagcttaaagtttgcaagccatgaa  22464900                            --------->ANAC58                            --------->ANAC58                            --------->ANAC46                           --------->ZAT18                         --------->ZAT14                         <---------ZAT14                         --------->ZAT18                         <---------ZAT18              --------->ANAC58                     --------->DAG2                   --------->ANAC46 ---------->DOF2    ---------->DOF2                   --------->ANAC58 ---->DOF2        <------NtERF2               <------ZmHOX2a(1)                                     < ->AtLEC2       <---------ANAC46      <------ZmHOX2a(1)                               <------ZmHOX2a(1)   agaaaaagaactgaaatggcgcaaaagtgcacacaagagaggaacagaggaagaacaagaaacagaatgcagactggaagaatagagaggagacgaagaa  22465000                                  <---------YAB1          <-------TEIL                             --------->ZAT6              <------ZmHOX2a(2)                           --------->YAB1               <---------ARR11(3)                     <---------ANAC55(2)                --------->ARR11(3)                     ----------->GT1                    --------->AGP1                     --------->ANAC55(2)               <---------GLK1(1) <----------DOF2  <---------ARR14(2)           ---------->DOF2                     <----------DOF2 ---------DAG2    --------->ARR14(2) --------->CCA1(2) --------->GLK1(1)<---------TOE2(3)           <   cacctttggagagtttagacgatatgtaataacagtaagatagagagattaaagcagagatccatacctcgattaagtttctaaacttttcttccatttc  22465100                                           --------->ALFIN1                                         =========================bZIP_DOF                                         <---------ANAC46         <---------MYB52(1)              --------->O2       <---------ANAC58                  <---------TGA1a       <---------ANAC58                  <---------ANAC58       <---------ANAC46                  <---------bZIP60(2)    <-----------RAV1(1)       --------->At4g35610   ------>ZmHOX2a(2)          --------->ZAT2  <------ZmHOX2a(2)           <---------At4g35610 --------->ARR14(2)           <---------ZAT2 <---------ARR11(3)        <---------At4g35610                                                      < --------->AGP1            --------->At4g35610--------->PCF5                                        < --------->ARR11(3)     *TSS ----------->RAV1(1) ------>ZmHOX2a(1)                                  - <---------AGP1      <---------LBD16     <---------ANAC58     <-----------GT1                       - <---------ARR14(2) <---------ANAC46  ----------->HVH21    <---------ICU4                  ---------- ---------CCA1(2)   <-----------RAV1(1)  <---------O2  ---------->DOF2           ---------->DOF2   --   tcagatctgtcgtttgctaattctgtggaagcagcagagtttgacgtggtcctgtattaaagaattaccacaaaatatgactcaaaagtttaagacaata  22465200                                                        ==========================bZIP_DOF                                                        --------->TGA1a     <---------ANAC58                                   <---------TGA1a     <---------ANAC58               ---------->DOF2    ------->MYC3 ---------ZAT2            --------->AHL20(2)    --------->STY1(2) ---------At4g35610   <---------YAB1==============================bZIP_DOF -------->ZAT2 <----------DOF2  --------->At4g35610 <---------ALFIN1                                - -------->At4g35610   --------->AHL20(2)        <---------STY1(2)       --------->DAG2            === -->CBF  <----------DOF2 <---------YAB1   --------->ZAT18              ---------->DOF2            --- ------->GLK1(2)      <---------AHL20(2)--------->PCF2 <-------MYC3<------NtERF2  <---------GLK1(1) <   gaagctggcttctttttcttttatattattaaacagctaaaaggcccactagctacacatgtgagtggcagagaaaagttatagatttcttctattcttc  22465300                                                                                                  <--                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                           --------->ANAC58                                                                                           --------->DEAR3(1)                                                                                           --------->ANAC58                                                                                           --------->ANAC46           <---------ZAT6                  <-----------RAV1(1)                             --------->DREB2C(2)      <---------ANAC58          --------->YAB1                            ------>ZmHOX2a(2)------->GAMYB      <---------ANAC46         <---------ATHB12                         <-----------ARR10 <---------MYB55(2)      <---------ANAC58       --------->WOX13(1)                     <---------At4g35610   <----------   <----------DOF2         <------ZmHOX2a(2)                    <---------ICU4            --------->MYB46(3) -------->REM1(1)         --------->ARR11(3)                    --------->ATHB12         ------>MYB46(1) =================================HOX2a_HOX2a                  <---------YAB1            ------>MYB83 --->ZmHOX2a(1)           <---------ARR11(3)              --------->YAB1--------->ARR11(3)--------->DEAR3(2) ---------ALFIN1      ---------->DOF2     <---------TOE2(3)    --------->ICU4            -------->P   ctacactttcgtagagtgagacacaaaagatcaatcaaactactaatgttgcaactacaaggataatgagtgctgatctagtcattaatccaaccgccag  22465400                                                                                    --------->At4g35610                                                                                 <------NtERF2                                                                                ------>NtERF2                                                                               --------->ALFIN1                                                                               ----------->HVH21                                                                              --------->ATERF1(1)                                                                              <------NtERF2                                                                              <-------GAMYB                                                                             <---------MYB46(3)                                                                             <---------ATERF1(1)                                                                             <---------RAP2.3(1)                                                                            <---------DEAR4(1)                                                                            <---------ANAC58                                                                            <---------DEAR3(1)                                                                            <---------RAP2.6(2)                                                                            <---------DREB2C(2)                                                                            <---------ANAC46                                                                            <---------ANAC58                                                                           <------NtERF2                                                                           --------->ATERF1(1)                                                                           <---------ABI4(1)                                                                          <---------ERF1   ----------------->AGL3                                                <---------DEAR3(1) ----ZmHOX2a(2)               <-----------RAV1(2)                        --------->ALFIN1 ----->ARR14(2)          <---------ANAC58                               --------->ATERF1(1) --------ARR10           <---------ANAC58                              <---------MYB46(3) ----->AGP1    <---------MYB46(3)                                     <---------DEAR3(1)           <- ------ARR14(2)--------->MYB111(1)                                    --------->ALFIN1         ------ --AtMYB77    <--------P<-------TEIL   <---------ALFIN1               <---------AtMYB61 ---------->DOF2   atcgactcatataagggtagttcgggttcgggccaggggcaaaaccccttggactcatttcgaagtcactaggtggtggcggtggcagtggaaagtcatg  22465500                                              ---------->DOF2                                          --------->ALFIN1                                        <---------TGA1a                                        =================bZIP_DOF                                        <---------bZIP60(2)                                        <---------ZAT2                                        --------->ZAT2                      <------MYB46(1)   <---------ANAC46             --------->ATHB12                      <------MYB83      <---------O2                <---------AHL20(2)      ---------                   <---------MYB52(1)  <---------AtMYB61       <---------MYB52(1)       <-------TEIL                  <------NtERF2    <---------At4g35610        ----------->GT1          <---------ANAC46 -----ZmHOX2a(1)--------->ZAT18    --------->At4g35610     ------>ZmHOX2a(1) ------>ZmHOX2a(2) --->ICU4 --------->GLK1(2)      <---------RAP2.6(2)       =========================HOX2a_HOX2a   aggatttaagagattatgtccgctaggttgcaatggaggctgaggtgggaaagagctcatcctctggtaattcatttgatcgaaatgaggcgcataacgt  22465600  Previous    Next  AGI:  At5g55380.1    Description:  membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-related. similar to long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein [Arabidopsis thaliana] (TAIR:AT5G55370.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61367.1); contains InterPro domain Wax synthase (InterPro:IPR017088); contains InterPro domain Membrane bound O-acyl transferase, MBOAT (InterPro:IPR004299) Range:  from: 22463850    to: 22465124    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g55390.1    Description:  EDM2; transcription factor. similar to ELP1 (EDM2-LIKE PROTEIN1), protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G48090.1); similar to hypothetical protein OsI_027838 [Oryza sativa (indica cultivar-group)] (GB:EAZ06606.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61366.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38872.1); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011) Range:  from: 22465192    to: 22471640    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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