Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            --------->ARR11(3)                                                    ----------->HVH21                                                   <------NtERF2                                 ----                                                  --------->LBD16                             -------                                            ---------->DOF2                                ----------                                         --------->YAB1   <---------ARR14(2)              <----------ID1     --------->ANAC58                   <---------ATHB12  --------->ARR14(2)           --------->ANAC58     --------->ANAC58                   <---------ATHB51  <---------ARR11(3)           --------->ANAC58 ->DOF2                       --------->AHL20(2)<---------LBD16 <---------ANAC46   <-----------GT1   caatctcaagctccaagaatatatgtagagaattaaaaaccaataataaagccggagacagatattgtttgtattcatacatttgtaacaagacaacaaa  22461600                   --------->ANAC58                   --------->ANAC58                  --------->DAG2                                             --------->ANAC58                 ---------->DOF2                                    ----------->HVH21      --------->TOE2(3)              <---------AHL20(2)           <---------ANAC58      <----------DOF2      <---------LBD16 <---------YAB1         <---------ANAC58 ----->YAB1   <----------ID1         <---------YAB1 <---------TOE1(3)        --------->ANAC58 --->DOF2     <---------ANAC46    <---------AHL20(2)<---------TOE2(3)--------->ATHB12            <--- ->RAV1(1)   <---------------------WRI1 --------->ICU4         <---------TOE2(3)               ------   gatgacaactttaatggcgaaaagccatatggggattttataattttgaatattagggttttgttgaggcttgatggggaagcaagtgatgcatatgaat  22461700                                                                                           --------->ANAC58                            <------ZmHOX2a(1)                                              --------->ANAC58                            ================HOX2a_HOX2a                                    --------->AtLEC2                      ---------->DOF2                                           <------ZmHOX2a(1)                 --------->ALFIN1         <------ZmHOX2a(1)                    ----------->GT1 ------             <------ZmHOX2a(1)       ====================HOX2a_HOX2a --------->ANAC58  <-------------          --------->HSFB2a(2)        ------>ZmHOX2a(2)               --------->ANAC58 --------->ANAC58 ------LBD16 ===============================HOX2a_HOX2a            <---------ANAC58   --------->ANAC58 ->TEIL   <---------HSFB2a(2)--------->ARR11(3)   <------ZmHOX2a(1)<---------ANAC58 ---------->DOF2   cgggagagagttcgaggaagtggggaaagaggaccttgatcgaaggagaagaggatgagtttgaaatttgcgagccatgagaggaaaaaagccatgcaac  22461800                                                  <-------TEIL                                            --------->ZAT14                                    XXXXXXXXXXXXXXXXXXXX>MIR164A/B                                    XXXXXXXXXXXXXXXXXXXX>MIR164C          --------->TOE2(2)        --------->ANAC58 <---------ZAT14                   --------->ANAC58 --------->ZAT14          ----------->GT1   <---------ZAT14                                   ------>ZmHOX2a(1) -->P     --------->TOE1(2)<------ZmHOX2a(1)<---------ZAT18                          <----------DOF2 --------WRI1 <------ZmHOX2a(1)    --------->ANAC46   <------ZmHOX2a(1)            --------->ZAT2   cagagaagtgaacataggagaaaaacagaggaaaaacaagaaacagagcacatacaggaagaacagagagtaatcgaaaaacaccagctttgattcctgt  22461900                                                                                               <-----                                                                                         <----------DOF2                                                                                     ------>ZmHOX2a(2)                           <---------ICU4                                           <------ZmHOX2a(2)                           --------->ATHB12                                        <---------ARR11(3)                          --------->ICU4                                           --------->ARR11(3)                  --------->CCA1(2)                                                <---------AGP1                 --------->ARR11(3)                                                --------->AGP1                 <---------ARR11(3)                                                <---------ARR14(3)                 <---------ARR14(2)                                <<<<<<<<<TBF1   --------->ARR14(2)                 --------->ARR14(2)                            --------->ARR11(3)  --------->ARR14(3)                 --------->ARR11(1) --------->GLK1(1)  <---------ARR11(3)          <---------ARR14(2)               ----------->ARR10    <---------GLK1(1)  --------->ARR11(3) <---------CCA1(2)  --------          --------->ZAT6  <---------YAB1 ---------->DOF2       <---------ARR11(3) <---------CCA1(2)--   tgataagtagtaacagtaagatatggagattattgctgaaatccaaagcttgatgaagttcttgagttcttcttccatctctctagatcttctttttctt  22462000              <---------MYB52(1)             --------->TOE2(3)         <---------MYB52(1)       ------->GAMYB       --------->TOE1(3)                  --------->YAB1                                     <-------       --------->TOE2(3)                  -------->HAHB4                         --------->GLK1(2)     <---------At5g28300                 <---------YAB1                          --------->ARR14(1)    --------->MYB52(1)                 --------->YAB1     --------->YAB1        <---------GLK1(2)   --------->MYB46(3)                 <---------AHL20(2)  <---------ICU4        --------->ARR11(1) -----DOF2  ----------->GT1       --------->AHL20(2)  --------->YAB1            --------->ARR14(2) -->ID1--------->ANAC46        ------->TEIL    <------ZmHOX2a(1)                <---------ARR14(2) ---------->CBF     <---------YAB1<---------AHL20(2)------->TEIL   ---------->DOF2<-------TEIL   tttcaataaccgtaacgttattttgatgggatgaatttaaataataataggatgaatcaaaaatgacatgaaagctattacagattcggacaaataaacc  22462100                           ------>ZmHOX2a(1)                          --------->TOE2(3)                          --------->TOE1(3)                       <---------ARR11(3)                       <---------ARR14(2)           ----------->HVH21                       --------->ARR11(3)          ------->MYC3                       --------->ARR14(2)          <-------MYC3                      --------->GLK1(1)            <-----------HVH21                      <---------GLK1(1)          ------->TEIL                      <----------TaMYB80      --------->ANAC58                     --------->ARR11(3)       --------->ANAC58                        --------->YAB1                     <---------ARR11(3)      --------->SPL7                ------->TEIL                     ---------->TaMYB80     ------>NtERF2               --------->ANAC58                     --------->ARR14(2)    ----------->HVH21            --------->ANAC46                     <---------ARR14(2)    <---------SPL7               --------->ANAC58   <---------                    <------ZmHOX2a(1)    --------->At4g35610        --------->AtLEC2 ----------->GT1                  --------->LBD16        <---------At4g35610 <----------DOF2     ------------>CBF  <-----------GT1<---------LBD16      <---------ANAC58    --------->ARR11(3) --------->TOE2(3)    <-- ----GT1         <-----------RAV1(2)  <---------ANAC58    <---------ARR11(3) --------->TOE1(3)    ---   tgttttgcctctcaactctccaggatatcctcaaaccgatgcgagcggacgcatgtgacaggtctttatcatgcacgaacctcaacaatgaaaaaaccat  22462200                                                                         <------ZmHOX2a(1)                                                                       <---------TOE1(3)                                                                       <---------TOE2(3)               --------->ZAT18                                     --------->YAB1         ------>ZmHOX2a(2)                  ---------->DOF2       <---------ATHB12       <---------AGP1                   --------->At4g35610       <---------YAB1       --------->ARR14(2)    --------->ANAC58   --------->ALFIN1  --------->ICU4 <---------TOE2(3)           --------->ANAC58--------->DAG2   ------------>CBF----------->GT1 --GT1 <---------ARR14(2)  <-----------GT1<----------DOF2 --------->YAB1 --------->YAB1 -------AHL20(2) ----------------->AGL1 <---------At4g35610  --------->YAB1 ---------->DOF2 ------>AHL20(2)----------------------->TaNAC69(2)   <---------------------WRI1                     <   tttaatgtagatcggagtgtccaaatttgtaacgcatttgggagcttaaagtgttgtcgataataacaatgataaggataaagaaaaaaaactcttcttc  22462300                                                        ------->GAMYB                                                       <---------MYB55(2)                                     <-----------GT1   <---------MYB111(2)                              ------->TEIL             --------->MYB46(3)                            ------->MYC2               <---------MYB52(2)              --------->AHL20(2) <----------DOF2      ------>MYB46(1)              <---------AHL20(2)<---------ANAC46      ------>MYB83           --------->TOE2(3)------->MYC3             ----------->RAV1(1)                    ---------     <---------ANAC58       <-------MYC2            ------->GAMYB                  ------->TEIL     <---------ANAC58       <-------MYC3           --------->MYB46(3) <-----------GT1  <---------ICU4 ---------ATHB51      --------->ANAC46     --------->TOE2(3)          --------->ZAT6--------->ANAC46   aaattatgcgttacattaaaatacagacaacgtgccttttaacaacgtcaataaccaacaaacattcacttatcactctcttatgcacatcatttcttaa  22462400                        <----------DOF2                      <---------At4g35610                      --------->At4g35610                      <---------ZAT2                      --------->ZAT2                                         <------NtERF2                  ------>MYB46(1)                                          <---------ANAC46                  ------>MYB83                                             <---------ANAC58                  -------->P                                               <---------ANAC58                --------->AtMYB61                                       --------->ALFIN1                <---------MYB111(1)                                   --------->O2                ------->GAMYB                                         <---------bZIP60(2)      ------                --------->MYB46(3)                                    <---------O2         --------->ARR14(2)               <---------MYB55(2)                                     --------->TGA1a   --------->DEAR3(1)               <---------MYB52(2)                                     <---------ANAC46------>NtERF2               --------->MYB46(3)                                  ----------->HVH21<---------ABI4(2)              --------->ANAC46                                    --------->SPL7  --------->ANAC58              --------->ANAC58                                 --------->DEAR3(1) --------->ANAC58              --------->ANAC58                             ----------->HVH21<---------SPL7 <---------ARR14(2)      --------->At5g28300      --------->ANAC58           --------->LBD16 <------NtERF2<------NtERF2     ----------->GT1------->GAMYB                   --------->ANAC58  <---------TGA1a--------->DEAR3(1)   <---------ANAC46--------->MYB46(3)      --------->At5g28300--------->DEAR3(2)<------ZmHOX2a(1) >TOE2(3)   --------->MYB46(3) --------->ANAC58     --------->ANAC58<---------ALFIN1--------->MYB46(3)   catttgagggtaaaacaaccaaccagctgtaacgagcaaaaacaccgtaattgcaagacccgagaccgcccgacgtggcgtaggaagccaccgcatcctc  22462500  Previous    Next  AGI:  At5g55360.1    Description:  long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein. similar to membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-related [Arabidopsis thaliana] (TAIR:AT5G55350.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61367.1); contains InterPro domain Wax synthase (InterPro:IPR017088) Range:  from: 22460950    to: 22461978    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g55370.1    Description:  long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein. similar to membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-related [Arabidopsis thaliana] (TAIR:AT5G55380.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61367.1); contains InterPro domain Wax synthase (InterPro:IPR017088) Range:  from: 22462311    to: 22463342    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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