Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       ------>ZmHOX2a(2)                                                                    --------->GLK1(1)                                                                    <------ZmHOX2a(2)      <---------ARR11(3)                              <-----------RAV1(1) ------>P                                             --------->ALFIN1    --------->ANAC46 ---->At4g35610                                      ------->MYC3  <---------ARR11(3) -----At4g35610                                --------->ANAC46    --------->ARR11(3)              <- --->ANAC58                             --------->GLK1(2)         <---------GLK1(1)             ----- --->ANAC58            ----------->GT1 <---------GLK1(2)     ---------->DOF2          <---------MYB52(1) -->DOF2--------->ATHB12           ---------->DOF2   <-------MYC3 --------->GLK1(1)<-------TEIL<-----   ctacccaaaatcatcggtgtataggttgtaaaaatgcaaaagaatctacaatccatgtgttgccaaagagatctctactcaagggtccgtttgagtagaa  22436000                                         <----------DOF2             <----------ID1      <---------ANAC46           <-----------GT1                     ----------->GT1 ---------DOF2                  <-----------GT1                    ---------->DOF2 ---->GLK1(2)     <----------DOF2---------->ID1            <---------DAG2        ---------->DOF2 ----GLK1(2) ---------->DOF2  <XXXXXXXXXXXXXXXXXXXXXMIR855 <----------DOF2     <---------YAB1   tctttgtgtcttaaaaaaagcttttttttttttttttccttctcttttgtttgtaatgctacttttacaaaaagaaaaattgtgaaagaagagcctccat  22436100                                                 <----------DOF2                                              <---------YAB1                                           <------ZmHOX2a(2)                                     ---------->DOF2                  --------->ATHB12--------->ANAC58                 <---------YAB1   --------->ANAC58         <-----------GT1<---------WOX13(1)<---------ARR11(3)  <---------AHL20(2)  --------->ATHB12    --------->ARR11(3)                   <---------WRKY12    <-  --------->AHL20(2)<---------WOX13(1)   <------ZmHOX2a(1)<------NtERF2      <---------ARR11(3)    <-   ggaattttttaaaaccctactgattgattgatacacaagaaaaggatcatgcttttagtcggagtaaacaaaattgcaaggtcatcgttttggaatttga  22436200                                  <---------ATHB12                              --------->MYB46(3)                             --------->ANAC58                             --------->ANAC58                             --------->ANAC46                            --------->RAP2.3(3)                          --------->ZAT18                                                <---------ANAC46                          <---------ZAT18                                            <------------CBF                         --------->ANAC58                                            >>>>>>>>>ARR2  <                         <---------ANAC58               <---------WRKY18(1)      --------->YAB1     -   ----------------->AGL1<---------ANAC58               <-----------GT1         <---------ATHB12   --   ----------------->AG  --------->ANAC58        ---------->DOF2   <---------TOE2(3) >>>>>>>>>ARR1 <- --------ANAC58         <---------ZAT18      <---------TOE1(3)   <---------AHL20(2)<---------YAB1---- --------ANAC58         --------->ZAT18      <---------TOE2(3)  --------->AHL20(2) <---------TOE2(3)-   gtcttgccaatttggagaaaacttggtgcgcacccaattaagaggttaagggaaagtttgaccatatttaatgtagattccaattaagattgtgtatgac  22436300    --------->ATHB12  <---------WOX13(1)                                                               *TSS <------------CBF                                        <---------At5g28300     <---------ICU4 ---------ICU4                                           <---------LBD16        <---------YAB1 -------->ATHB12                          ------>ZmHOX2a(1)                   --------->YAB1 ------->ICU4                        <----------DOF2    <-----------GT1      <---------YAB1 --------YAB1                        ------>ZmHOX2a(1)  --------->MYB52(1)  --------->ARR11(3) ----->YAB1   --------->ALFIN1  --------->ANAC58    <---------AHL20(2)      <---------ARR11(3) <----- -------->ATHB51                --------->ANAC58   --------->AHL20(2)----------->GT1           <-----   cataattgatttagaggtgggaaacttgttgggcaagtcctttcctctctgtattaattcacggttttagatggagaatatcatcatttcttcatttagg  22436400                                                                                                    -                                                                                                <----                                                                                                -----                                                                                                <----                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               ------                                                            ------>MYB83                      <------                  <---------DAG2                            ------>MYB46(1)              --------->TOE2(2)                  <----------DOF2                         ------->GAMYB                  <---------LBD16     --------->TOE2(3)                                    --------->AtMYB61              --------->TOE1(2)     <----------DOF2 ---------->ID1                      --------->MYB46(3)  <-----------HVH21<------ ----TOE1(3)     <---------ANAC58               <---------At4g35610         <----------DOF2  <-------GAMYB ----TOE2(3)     <---------ANAC58      <---------ICU4   -------->P---------->DOF2       ----------->RAV1(2)   gttttttctttaatctcttgcttttcgcttaagaacattactcatgtctctgcttctcaaccagcccttgaagctctgctttcagagcaaacctgggttg  22436500      ------>ZmHOX2a(1)    ------>ZmHOX2a(2)    ==============HOX2a_HOX2a   <------ZmHOX2a(2)   ===============HOX2a_HOX2a   ==================HOX2a_HOX2a  <---------ARR11(3)  --------->ARR11(3)  <---------ARR14(3)  <---------GLK1(2)  --------->ARR14(3)  <---------ARR14(2)  --------->ARR14(2) ---------->ARR10 --MYB83 ------>GT1 --MYB46(1)                                                                        <---------HSFB2a(2) ----MYB46(3)                                                                  <---------ANAC58 --->MYB59 ------>ZmHOX2a(1)                                                   <---------ANAC58 --->MYB111(2)                                                              --------->ARR14(2) --->MYB46(2)                                                               <---------ARR14(2) ----AtMYB61              <---------ANAC58                              <---------At4g35610 --->MYB111(1)            <---------ANAC58                      <---------YAB1------>ZmHOX2a(2) ---MYB55(1)  ------>ZmHOX2a(1)                                <-----------HVH21   --------->HSFB2a(2) --P=================HOX2a_HOX2a                    <---------ALFIN1----------->HVH21            <---   gtaagatcctctcctcctctctctaatggcttctcaacttccaaattgcaaacccctccttgtactgtcattgacgctgatccttgtggaaggggtctcg  22436600                                                                          --------->KAN4(2)                                                                         <---------GLK1(1)                                                                         <----------TaMYB80                                                                         <---------KAN4(1)                                                                        --------->ARR11(3)                                                                        <---------ARR14(2)                                                                        --------->ARR14(2)                                                                   <------MYB83                         --------->GLK1(2)                         <---------ANAC46                         ------->TEIL                              <------MYB46(1)                      <---------YAB1                              --------->MYB111(1)                    <---------ICU4                                <---------AtMYB61                   --------->ICU4                              <---------ARR14(2)                   <---------YAB1             ---------->DOF2  --------->ARR14(2)      --------->ICU4                 --------->YAB1         <---------ANAC46<------NtERF2   <---------ARR11(3)    <------ ---NtERF2      <---------YAB1   <---------ZAT14      --------->ALFIN1<---------MYB46(3)--------->ATHB12   gcaaactcttcatttactatcataatgaatctgaatacactggtttggaaaagaaggtggctatggatttggtggatattccaatggcaacgattgggtc  22436700                  <----------DOF2             <---------At4g35610                       ------>ZmHOX2a(2)            --------->MYB111(1)         <---------ANAC46                  <---------ARR14(2)        <---------MYB46(3)              <---------ANAC58         <--------P                         -      <---------ANAC58                  <---------ANAC55(2)     <-------GAMYB           --------->ANAC58      <---------ANAC58                  <---------ANAC58     <---------LBD16 --------->ANAC46      <-      <---------ANAC46          --------->At5g28300  <---------ARR11(3)   --------->ARR14(2)    ----- -----HVH21<--------P          ----------->GT1       --------->ARR11(3)<---------ANAC46 --------->ANAC58   atcccatggctgggtagctactttgaaggaagacggtatattgcgtctccaagatgatctaaacccggttgcatcgtatacagaaccaaaacgcattccc  22436800                                                                                           <---------RAP2.6(2)                                                                                         <-----------RAV1(1)                                                                           <------ZmHOX2a(1)    <----             --------->ZAT6                                            ------>ZmHOX2a(1) <---------bZIP60(2)          <---------CCA1(2)                                          =============================RAV        --------->ANAC46                                             ================================RAV --------->ARF1                            <---------YAB1            <---------LBD16  <-----------RAV1(1) ----------HVH21     --------->ATHB12   --------->DOF5.7(2)          ----------->RAV1(2) <---------ANAC46 ------>RAV1(2)  ------>NtERF2       <---------ATHB12       ------>ZmHOX2a(1)    <------ZmHOX2a(1)   ctgtctcccctcgtaactctgcctcattgccaaactcaaatcgttaccaatgtgtcattgtcctcatcttctcctgaggatgaggaatgtgttgtggctg  22436900  Previous    Next  AGI:  At5g55260.1    Description:  PPX2 (protein phosphatase x-2); protein serine/threonine phosphatase. Identical to Serine/threonine-protein phosphatase PP-X isozyme 2 (PPX2) [Arabidopsis Thaliana] (GB:P48528;GB:O22626;GB:Q29Q40); similar to PPX1 (protein phosphatase x-1), protein serine/threonine phosphatase [Arabidopsis thaliana] (TAIR:AT4G26720.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ58266.1); similar to Os09g0284200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062774.1); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843); contains InterPro domain Serine/threonine-specific protein phosphatase and bis(5-nucleo Range:  from: 22433825    to: 22436090    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g55270.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G55890.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G55880.1); contains InterPro domain Protein of unknown function DUF295 (InterPro:IPR005174) Range:  from: 22436383    to: 22437636    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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