Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               --------->ANAC55(2)                             --------->ANAC46         --------->YAB1      --------->ANAC58 <---------ATHB51    ------>ZmHOX2a(1)        ---------- ------>MYB83                --------->ANAC58 <---------AHL20(2)<---------ZAT18          --------->MYB52(1) ------>MYB46(1)             <---------ANAC55(2)        --------->AHL20(2)            --------->YAB1 ->TOE2(3)       --------->ICU4         ----------->GT1 <---------AHL20(2)     <---------ARR11(3)   accaaatcaaatcagagtaattatctaaaatacgaaatagaagagtaaattattcgatttaaatagtcctcttgataactaaatcttatcgtaacgaaaa  22427800                                         --------->YAB1                                        <---------ATHB12                                       <---------ARR14(2)                                       --------->ARR14(2)                                      --------->WOX13(1)                                ------>ZmHOX2a(2)                               <------ZmHOX2a(2)                              <---------AGP1                              --------->AGP1  <---------At4g35610                              <---------ARR14(2)                                         --------->CCA1(2)                              --------->ARR11(3)                                        <---------ARR11(3)                              <---------ARR11(3)                                        --------->ARR11(3)                              --------->ARR14(2)                                --------->ZAT6                              <---------ARR14(3)                             <-----------GT1---------                              <-----------ARR10 --------->ZAT14             --------->AHL20(2) ->GT1                        --------->ARR14(3)<---------ZAT14             <---------AHL20(2)   tacacttacgaagaaatgaaattttaaaaacagatcttgccaatcttgagcacagtcccttcacttaaaattcccaaatttatcactcgagatatagaaa  22427900                                                                                               <-----                                                                                               <-----                                                                                          --------->At4g35610                                                                                          <---------At4g35610                                                                                          <---------ZAT2                                                                                          --------->ZAT2                                        ----------->GT1                                 <------NtERF2                                   --------->AHL20(2)                                 <---------ANAC58                                   <---------AHL20(2)            ----------->RAV1(2)  <---------REM1(1)               <----------DOF2   --------->ANAC55(2)    <---------------AtSPL8        <---------ANAC46    --------->YAB1 <---------AHL20(2)  --------->YAB1   <---------------AtSPL3        <---------ANAC58 -->GT1--------->YAB1       <----------DOF2     --------->AHL20(2)              --------->ATHB12   --   atagaataataagaaggctttttaatggaacttttaagtaattagaaaaaaaaaataagatgtacagacctgagcttgagagttattggcgtagctgtct  22428000                                                                                                    =          <---------DAG2                                                                            -        ------>NtERF2                                                                              <-       <---------ALFIN1                                                                            --  <----------DOF2                                                                                 <--  ------>ZmHOX2a(1)                             ---------->DOF2                                   --- ----ANAC58                                     <-------TEIL                                      <-- ----ANAC58<----------DOF2           <-------TEIL                                      <----------DOF2 -------->ID1                       <----------DOF2                              <----------DOF2  ---   tgtcctttgccacctttcatgctgagaagtctctcgagcttcatgttacatacagcaacgttgtctcccttagaacccattctctttctctttctctatg  22428100      ------>ZmHOX2a(1) ============HOX2a_HOX2a                                                <-----------TBP ----->ZmHOX2a(2)                                              --------->ANAC58 --------GLK1(1)                                               --------->ANAC46                ------ ------->GLK1(1)           --------->REM1(1)               <------ZmHOX2a(1)           <------ZmHOX2a(1) -------ARR11(3)           <---------ALFIN1             <---------HSFB2a(2)           <----------ID1 ---->TEIL         <----------DOF2                 --------->ANAC58     --------->AHL20(2)---------->DOF2 -------AGP1 <----------DOF2                  <----------ID1   --------->ANAC58  ---------->DOF2 ------>ARR11(3)<-----------GT1   <----------DOF2  --------->ANAC58   *TSS     <------ZmHOX2a(1)   gatctctccttctctctttaactttctctacaccttctttttgtgaatgagacaagctcgaggagacgacacatatatataggaaaagaggacaaagaga  22428200                                                            <-------TEIL                                            <---------AHL20(2)                                           --------->AHL20(2)                                           <---------AHL20(2)                                          <---------YAB1 <---------ANAC55(2)     <---------YAB1                    <---------YAB1    <---------ANAC58              --------->AtLEC2   --------->YAB1                      <---------AHL20(2)<---------ANAC58          <---------YAB1  ----------->GT1                      --------->AHL20(2)<---------ANAC46    <---------YAB1       ---  --------->ICU4                    --------->AHL20(1)  --------------->AtSPL8  <---------YAB1    --- --->CCA1(2)    ------->TEIL  ----------->GT1        <------------CBF        --------->ICU4     -----   tgaaatgataaatgtatgaatttagttgaatggggaaacatattattaaatgtgccattgcgtacatattttgtatatactgattattcatgcaaaaaca  22428300            --------->MYB52(2)        <---------YAB1                         ------->TEIL     --------->ICU4                          <---------ZAT14   <--------HAHB4                            --------->ZAT18   --------->YAB1                            <---------ZAT18                                 <-------   <---------ICU4                     <---------AHL20(2)                                     -------- ------>ANAC58                       --------->AHL20(2)                                      <------- ------>ANAC58                       <---------AHL20(2)  --------->ANAC55(2)        ---------->ID1 ---->MYB52(1)                       --------->YAB1  <-----------HVH21    <-------TEIL       --------   acgcatcattatgtttgtttcccaaaaaacaaaatacaattatatggtgtacttgtgtcacatgttatagtatatatacatggtttgtcattttgtgcac  22428400                                                                                                    <                                                                                                 <---                                                                                                 ---- <------MYB46(1)                                                                <---------AHL20(2)  - <------MYB83         ------->GAMYB ----------->GT1                           --------->AHL20(2)----- --ZAT18              <---------ALFIN1                                 <---------MYB46(3)  --------->ANAC46 ->ZAT18             --------->MYB46(3)                            <-----------RAV1(1)    --------->ZAT18 --ZAT14           --------->WOX13(1)            <---------ZAT14--------->ARR11(3)    --------------- ->ZAT14  <---------AHL20(2) <---------ANAC46    ---------->DOF2<---------ARR11(3)    <--------------   tgtaggttgtttttattttgtcaaccacattttgtgtagggctaattggagtaaagagttgaacaatatatggtggtcatatatatatgatgtacacaat  22428500                               <---------ARR14(2)                <---------ANAC55(2)    --------->AHL20(1)         <---------ARR11(3)    <---------ARR11(3)   <-----------GT1                                                   --------->TOE2(3) ---------ICU4  --------->ANAC46                                        <---------YAB1   --------->ARR11(3) ------ICU4     --------->ANAC58                                      ----------->GT1    <---------ARR14(2) ----->YAB1     --------->ANAC55(2)                               <---------TOE1(3)      <---------ARR11(3) -------->YAB1  --------->ANAC55(1)           <---------AHL20(2)  <---------TOE2(3)     --------->RVE1(1) ---->ICU4      --------->ANAC58          <---------RVE1(1) <---------YAB1              --------->CCA1(1) >AtSPL8 <---------------AtSPL8--------->ARR11(3)       --------->ANAC55(2)        --------->YAB1 -AtSPL8 --------------->AtSPL8--------->ARR14(2)       <---------ANAC55(2)  <---------AHL20(2)   aatcaatatatgatgtacacgtataattttcaatatctgatgtgatattttttttgtcaagtatttttgaggttgtgatttaaaatgagaatatcttaaa  22428600                                    --------->AHL20(2)                                    <---------AHL20(2)                                 --------->AHL20(2)                                 <--------ATHB1                                 <---------AHL20(2)                                 <---------AHL20(1)                      --------->AHL20(2)                          ----------->GT1                                <---------AHL20(2)                         --------->ICU4                                  <---------AHL20(1)                <---------YAB1   <---------ICU4                         --------->AHL20(2)            --------->ANAC55(2)  --------->YAB1                       --------->TOE2(3)          <---            <---------ANAC55(2) --------->ICU4                      <-------TEIL      --------->YAB1         <---------MYB52(1)   --------->YAB1 --------->YAB1     <---------ICU4       <---------YAB1 <   atgacatttctgttaagtattatcgcaattgttaataattttttatatcaaaatagcatttgtacataagtacattaaatttgatatatcataatgtgtt  22428700  Previous    Next  AGI:  At5g55250.1    Description:  IAMT1 (IAA CARBOXYLMETHYLTRANSFERASE 1); S-adenosylmethionine-dependent methyltransferase. similar to GAMT2, S-adenosylmethionine-dependent methyltransferase/ gibberellin carboxyl-O-methyltransferase [Arabidopsis thaliana] (TAIR:AT5G56300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38891.1); contains InterPro domain SAM dependent carboxyl methyltransferase (InterPro:IPR005299) Range:  from: 22424699    to: 22428170    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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