Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     <---------AHL20(2)                                                                  --------->AHL20(1)                                                                  <---------AHL20(1)                                                                  --------->AHL20(2)                                                                  <---------AHL20(2)                                                                 --------->AHL20(2)          ----------->HVH21                                  <---------RAP2.6(3) ---------DOF2                                       --------->MYB46(3)            <------MYB46(1) --->ZmHOX2a(2)                         --------->DAG2      --------->RAP2.6(2)    <------MYB83 -----ARR11(3)                      <---------YAB1 ----------->RAV1(1)        --------->ATHB12 ---->ARR11(3)            ------->TEIL ---------->DOF2 ---------->DOF2       <---------YAB1   tctttcagttctatgacatattgacatgtatcaatgttatgaaaagtgtcttccaacaaaagccgaaattaatttgattttgatttggtttctggttctc  22422800                                                                                    <------MYB83                                                                                    <------MYB46(1)                                                                                    ----------->GT1                                                                                   --------->MYB59                                                                                   <---------AtMYB61                                                                               <---------MYB46(3)                     <---------DAG2                                            <------MYB46(1)                     <----------DOF2                                           <------MYB83             --------->AHL20(2)                                             <-------GAMYB             <---------AHL20(2)                                            <---------MYB46(3)         --------->AHL20(2)                  <----------DOF2              <---------TOE2(3)         <---------AHL20(2)    ----------->GT1     <-----------GT1        <---------YAB1      <---------ICU4<---------ANAC58  <---------AHL20(2)       <----------DOF2<---------AtMYB61   --------->YAB1   <---------ANAC58  --------->AHL20(2)    --------->GLK1(2)<--------P             <   taaaatcaaaattatataatttgcttttctatgtggaaatttaaattcttttgttacaaaataatcttttgttattttggttggtttggttaattttgtt  22422900                             <---------SPL7                            <------MYB46(1)                  <------MYB83                  <------MYB46(1)               <---------ANAC58             <---------YAB1 <------MYB83           --------->YAB1  --------->MYB59           -------->HAHB4  --------->MYB46(2)           <---------ICU4  --------->MYB52(2)                  <---------ANAC55(2)          --------->ICU4   <---------------AtSPL3              <---------ANAC46        --------->YAB1     <---------------AtSPL8              --------->ANAC55(2)       --------->AHL20(2)  --------->MYB111(1) <---------ZAT6  <---------ANAC58       <---------AHL20(2)<---------MYB52(1)    ----------->GT1 <---------ANAC58     <----------DOF2   <---------YAB1 >>>>>>>ZML2              <---------ANAC55(1) ----------DOF2<---------ANAC58<-------TEIL >>>>>>>ZML2      <-----------GT1  <---------GLK1(2)   ttctttgctttaattatgcttggttatgttaggtacggttctagttctagtgtaaaaacattgttacgtttcagtttcaaaattctcgttctggtttcta  22423000                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                -----                                                                                             <------NtERF2                                                                                             ------>NtERF2                                                                                            ---------                --------->O2                                                                ---------                <---------O2                                                    <---------ANAC46<----           <---------ETT(1)                                                   <---------ANAC46 ------           --------->DREB2C(2)                                                <---------ANAC58 <-----           ------->GAMYB <---------WRKY18(1)     <------ZmHOX2a(1)            <---------ANAC58-------          --------->MYB46(3)         --------->DAG2                      <------------CBF   ---------          --------->DEAR3(2)       ---------->DOF2                     <------NtERF2     --------->ARR14(2)        <-----------GT1 ----------->HVH21    --------->TOE1(2)        ------>NtERF2      <---------ARR14(2)    <----------DOF2    ------>ZmHOX2a(1)  ---------->DOF2       --------->MYB52(1)    <---------AtLEC2   tatcaacttttaaccgacaagtgtccttgactcgttgtaaaggtgaaagtaggagctagagatggcaaacggtggcattgtcgtgtgtgcatgtccgcca  22423100                                                                                         <---------O2                                                                                         --------->bZIP60(1)                                                                                         --------->O2 ----->ANAC58                                                                            <---------bZIP60(2) ----->ANAC46                                                                         <---------ATHB12 ----->ANAC58                   ------>ZmHOX2a(1)                                     ----------->HVH21 ->NtERF2                      --------------->AGL15                                  ----------->TGA1 >ANAC46                       <---------MYB59                             <---------ZAT2<---------ANAC46 >ANAC58                      ----------------->AGL1                       --------->At4g35610 -----LBD16                   ----------------->AG                         --------->ZAT2<---------bZIP60(1) --->DEAR3(1)      ------>ZmHOX2a(2)                                       <---------At4g35610 ----ALFIN1        ====================HOX2a_HOX2a                         <---------ZAT14 ---->HVH21      <---------ARR11(3)         <-----------GT1         --------->At4g35610 ----------->STF1 >ANAC58         --------->ARR11(3)  ----------->GT1*TSS            <---------At4g35610<---------TGA2(2)   cggagcatcaaaatgtttcgatcttctcttcttcctaatttgttaatttctattctcactgttgagagagagcagacagcagagagcaatgacgtcgatg  22423200                                      --------->ANAC58        --------->ALFIN1                             --------->ABI4(2)              <---------ANAC46                             ------>NtERF2                --------->ABI4(1)                             <---------MYB46(3)           ------>NtERF2   <---------bZIP60(2)                            --------->ALFIN1             --------->ANAC46 <---------ANAC58                            <---------DEAR3(1)           --------->DEAR3(1)     ----------->HVH21              --------->ANAC46        --------->ANAC58  --------->MYB46(3)<---------ANAC58              --------->ANAC58--------->ATERF1(1)      <---------At5g28300<---------ANAC46              --------->ANAC55(2)    --------->SPL7   <-----------GT1  ----------->HVH21          ---              --------->ANAC58<------NtERF2      <---------ANAC58 <---------ANAC58          ------>ZmHOX2a(1)            --------->CCA1(2)<---------ATERF1(1) <---------ANAC58 --------->MYB52(2)       --------->TOE2(3)  <------ZmHOX2a(1)      <---------DEAR3(1)   ----------->HVH21   <---------ANAC58   <---------ALFIN1   gagaggatggagagagacgcaatggagacggtggctccatacgctcgggtgacttatcaccgccgtgttcgtggtgacttggatgacacacttcctaaac  22423300                                                   ----------->HVH21                                                 <---------ANAC46                                                 <---------ANAC58                                                 <---------ANAC55(2)                                                 <---------ANAC55(1)                                                 --------->ANAC55(2)                                                 <---------ANAC58                                             -------->HAHB4                                            --------->ICU4                                            <---------ATHB12                                           <---------TOE2(3)     <---------ANAC55(2)                                          --------->YAB1         --------->ANAC55(2)               --                                        <---------AHL20(2)  --------->ANAC46                       <-                                     <---------AHL20(1)     --------->ANAC58                       <-                                     --------->AHL20(1)     <---------ANAC55(2)         <---------GLK1(2)                                     --------->ARR11(3)     --------->ANAC55(2)         --------->ARR14(2)                                     <---------ARR11(3)     --------->ANAC55(1)       ----------->ARR10           ------>ZmHOX2a(1)         --------->AHL20(2)     --------->ANAC58          <---------TOE2(3)          --------->TOE2(3)          <---------AHL20(2)    <---------TOE2(2)     --------->AHL20(2)-- ------------>AtSPL8                --------->AHL20(2)     <---------TOE1(2)    <---------YAB1 ------   cttgtacttcttcctaaacttctcttatacatattcaaatatattaatgatgcgtgactcatacgttacataacaattcttgattatttagatttgccga  22423400             ----------->HVH21           --------->ZAT2           ----------->RAV1(2)           <---------At4g35610 --------->ANAC58           --------->At4g35610 --------->ANAC58       --------->ANAC58        --------->ANAC46       --------->ANAC46    --------->ANAC46       --------->ANAC58  --------->ANAC58                  <----------DOF2     ---------->DOF2     --------->ANAC58            <---------ICU4 ------->ZAT18    --------->ANAC58                   --------->MYB52(1)    ----------->RAV1(1) --------ZAT18    --------->ANAC58         <------ZmHOX2a(2)             --------->At4g35610 --------ZAT14  <---------bZIP60(2)       <---------ARR11(3)     <---------ZAT18     <----------DOF2 ------->ZAT14 <<<<<<<GRF7--------->MYB46(3)        --------->ICU4       <---------At4g35610 >NtERF2  ------->TEIL <---------ALFIN1   --------->ARR11(3)    <---------ZAT6   ---------->ID1   gagcactacaagcacctgacatggaacacccacaaggaacaccagatcatagacataatggccttagtgttcttcagcaacatgtcgctttcttcgattt  22423500            --------->ATHB12         --------->bZIP60(1)         <---------bZIP60(1)    <--------ATHB1    <---------ICU4           --------->HSFB2a(1)    --------->YAB1---------->ID1    --------->ATHB51         <---------HSFB2a(1)                              --------->MYB52(1)    <------------ATHB5     <-----------GT1                                ------->TEIL   <---------ATHB51   <----------DOF2                                     <-------TEIL   --------->ICU4<-----------GT1                                      --------->MYB59   ggacaataatggcatcatttatccctttgaaaccttctctggtaaactcttcaatctcttcatatgtatagttatgtacataccggtttatacatttact  22423600                                                                              --------->ARR11(3)                                                <---------ARR14(2)            <-----------ARR10                                                --------->ARR14(2)           <---------CCA1(2)                                                <---------MYB52(1)      <------NtERF2                                               <---------MYB52(1)      <-----------HVH21<---------ANAC46                        ------->TEIL          --------->LBD16         <---------TGA1a  <---------At4g35610                     --------->ANAC46        <---------ANAC46         --------->TGA1a  --------->At4g35610                     --------->ANAC58       <---------LBD16           <---------O2     --------->ZAT2           <---------AHL20(2)             --------->ARR14(2)          --------->O2     <---------ZAT2   <---------ANAC46  --------->ANAC58     <---------ARR14(2)    <-----------GT1      <---------RAP2.6(2)   agtttgtgtatatttacataaacacgaatttgaattccaccagggttccggttactcggtttcaatttactcgcgtcgcttatcttggctgctggtatca  22423700  Previous    Next  AGI:  At5g55230.1    Description:  ATMAP65-1 (MICROTUBULE-ASSOCIATED PROTEINS 65-1); microtubule binding. similar to microtubule associated protein (MAP65/ASE1) family protein [Arabidopsis thaliana] (TAIR:AT4G26760.1); similar to 65kD microtubule associated protein [Daucus carota] (GB:CAD58680.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73840.1); similar to microtubule-associated protein MAP65-1a [Nicotiana tabacum] (GB:CAC17794.1); contains InterPro domain MAP65/ASE1 (InterPro:IPR007145) Range:  from: 22419254    to: 22422718    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g55240.1    Description:  caleosin-related family protein / embryo-specific protein, putative. similar to ATS1 (ARABIDOPSIS THALIANA SEED GENE 1), calcium ion binding [Arabidopsis thaliana] (TAIR:AT4G26740.1); similar to caleosin [Brassica napus] (GB:AAY40837.1); contains InterPro domain Caleosin related (InterPro:IPR007736) Range:  from: 22423152    to: 22424577    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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