Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             --------->ZAT2          --------->ANAC58          --------->ANAC58          --------->ANAC46      <-----------GT1  ------>MYB83  ------>MYB46(1)           --------->ICU4 ---------MYB59         --------->TOE2(3) -ZmHOX2a(2)           ----------->GT1                                                       -------- -->ARR11(3)         <---------ARR11(3)                                                      <------- ---ARR14(2)        --------->RVE1(1)                                                   <---------At4g35610 -->ARR14(2)   ----------->GT1                                     --------->ZAT18      --------->At4g35610 ---ARR11(3)  ----------->GT1<---------AHL20(2)          ------->TEIL                  ----------->RAV1(1)   gaccaaatttacaagcagggaaatatcgtaaatatttgtcaagaccacttactagtatgcatccttgagaccactatatttctcttgtccagcagtatcc  22369900                        <--------P                       --------->At5g28300                       <-------GAMYB                      <---------MYB46(3)                     <------NtERF2                    --------->LBD16                    <---------LBD16                    ------>NtERF2              ====================================HOX2a_HOX2a              ------>ZmHOX2a(2)                   --------->ARR14(2)             =====================================HOX2a_HOX2a             <------ZmHOX2a(2)                    <-----------GT1            <---------ARR11(3)                    --------->ARR11(3)            --------->ARR11(3)                    <---------ARR14(2)            <---------ARR14(2)                   --------->CCA1(1)            <---------AGP1                 <------ZmHOX2a(1)            <-----------ARR10              ----------->GT1            --------->ARR14(2)         ---------->DOF2       --------->MYB52(1) --------->MYB52(2)     --------->RVE1(1) ->ARR14(2) ------->TEIL<---------MYB52(1)----------->GT1         --------->At4g35610 --ARR14(2)<---------ARR14(1)     --------->GLK1(1)    --------->ANAC46---------->DOF2          -----   cagcattcgaaacggatcttgccgcggttagtgaagaaatctaaaggataaatatccacaccaagagtagctacaaagtccaagtttttgaaaatcaaca  22370000                 ----------->HVH21         ---------->DOF2                   <---------TOE2(3)      ------>ZmHOX2a(1)                   >>>>>>>>>WRKY18      --------->AtLEC2                <---------AtLEC2  <---------ARR11(3)               ---------->ID1--------->WOX13(1)  <---------ARR14(2)              <-------GAMYB<------ZmHOX2a(2)      <-------TEIL                <--  --------->ARR14(2)             <-----------RAV1(1)               <---------ANAC58               ---  --------->ARR11(3)             <---------MYB46(3)                <---------ANAC58        --------->LBD16 ---->TOE2(3)--------->ARR11(3)  --------->MYB52(2)      <---------AHL20(2)    <---------YAB1 <------   tcaaaatcctgcaaagaccatgacataggcattgtttgttgcattgacgatcaatctatataaacacttacgttcagtattatgctcaaattccccagtc  22370100                                                                                          ---------->DOF2                                                                                       <------MYB46(1)                                                                                       <------MYB83                                                               <------MYB83            <---------ANAC55(2)                                                               ----------->GT1        --------->MYB59                                                               <------MYB46(1)        --------->MYB46(2)                                                              --------->MYB46(2)      --------->MYB111(1)                                                              --------->MYB111(2)   <---------MYB52(1)                                                              --------->MYB59      <-------GAMYB                --------->ALFIN1                              <---------MYB46(3)  <------MYB46(1)             --------->DAG2               ------>MYB46(1) <---------TOE2(3)       <------MYB83 -------At4g35610                         ------>MYB83    <---------TOE1(3)       <---------MYB46(3) ------>At4g35610<---------MYB46(3)      ----------->RAV1(1)  --------->MYB111(1) --------->MYB55(2) -----HVH21---------->DOF2      ------>NtERF2  --------->YAB1<--------P       <-----------RAV1(1)   agatgtctcttgagaaaggtggtttttccagtgcctccatcaccaacaatgagaagtttgaaggttggtaaatcgacgttttgttggttaggtaaagcct  22370200                 --------->MYB52(1)                         --------->MYB52(1)              --------->ANAC46                             ---------->DOF2                    -------          --------->CCA1(2)                             --------->ANAC58                <------ZmHOX2a(1)         --------->ARR11(3)      ---------->DOF2        --------->ANAC46          <----------DOF2         <---------ARR11(3)    --------->ANAC58     ------------------------>ANAC81   <---------TOE2(3)         --------->ARR14(2)    --------->ANAC58---------->DOF2              <---------At5g28300     - <---------MYB52(2)   ------->TEIL    ---------->DOF2   --------->ANAC58   <-----------GT1    -------   gaaacgaacaagatatactcaacgaatttagccaagaaagaaaagactacaaagaaacaagcaaagggaagagcattttaccatcttttaggaagcacga  22370300                                                                        <-----------ARR10                                                                        <---------ARR11(3)                                                                   ----------->TBP                                                         <---------ARR11(3)                                                         --------->ARR11(3)                                                        <---------CCA1(2)        ----------->GT1                               --------->CCA1(2) --------->ARR11(3)    ---------->DOF2                                  --------->ARR11(3)--------->RVE1(1) -->ANAC58    <---------ARR11(3)                     <---------ARR11(3)--------->CCA1(1) --------->DOF2                            --------->ALFIN1        --------->AHL20(2)  ----------->GT1 -->ANAC58    --------->ARR11(3)           <---------REM1(1)       <---------AHL20(2) <---------TOE2(3)   gagaaagaaagagtaaaatctaagatgaatagatgtgttatggaggtgtaagggagatatatcttacatataaatatctccctatttttaggtgaaattt  22370400                                      --------->AHL20(2)                                  <---------AHL20(2)                                 --------->AHL20(1)                                 <---------AHL20(2)                                --------->ICU4                                 <---------AHL20(1)                                <---------YAB1                             <---------AHL20(2)                                  --------->YAB1                             --------->AHL20(1)                                  <---------ICU4                             <---------AHL20(1)                                 <---------YAB1                             --------->AHL20(2)                                --------->AHL20(1)                          --------->YAB1         ---------->DOF2               <---------AHL20(1)                        --------->AHL20(2)    --------->AHL20(2)               --------->AHL20(2) <--                        <---------YAB1--------->YAB1                           <---------AHL20(2) <--                        <---------AHL20(2)   <---------YAB1                   --------->YAB1      <--                       --------->TOE2(3)    --------->TOE2(3)                <---------YAB1     -----                       --------->YAB1 <---------AHL20(2)                    --------->TOE2(3)  ------                     <---------AHL20(2)   <---------YAB1--------->ARR11(3) <---------ICU4      <-----                    --------->YAB1--------->AHL20(2)    <---------ARR11(3) --------->YAB1  ----------    <-----------GT1<---------YAB1--------->AHL20(2)   ----------->GT1<---------ANAC46     --------->YAB1   tgttttaaactatttctgtttataatattaataaatttaattatatcattaaaaagaagataattttggtgtcttaaacattataatgactataacaatt  22370500                                                                            <---------AHL20(1)                              <---------MYB52(1)                           <---------AHL20(2)                             ------>NtERF2                               --------->AHL20(2)                            --------->RRTF1(3)                         --------->AHL20(2)                            --------->DEAR3(1)                         <-----------TBP                            --------->RAP2.6(2)                        <---------AHL20(2)                            --------->RRTF1(2)                       --------->AHL20(2)                      <-----------GT1                                <-----------TBP                    <---------YAB1                                   <---------AHL20(2)                  <---------AHL20(2)                               --------->AHL20(2)                 --------->AHL20(2)                                <-----------TBP       <---------ARR11(3)   --------->RAP2.3(2)                  <-----------TBP      --------->GLK1(1)   ------>NtERF2                          <---------AHL20(2)      <---------GLK1(1)   --------->LBD16                        --------->AHL20(2)     <---------ARR11(3) --------->MYB46(3)                     <-----------TBP     --------->ARR11(3) <---------LBD16                        <---------AHL20(2) -------YAB1 <---------ARR11(3)                                --------->AHL20(2)--------->YAB1 -------ANAC55(2)--------->ICU4                        --------->AHL20(2)<---------AHL20(2) -------ANAC46<---------AHL20(2)         --------->ANAC58    ----------->TBP--------->AHL20(1) ---->YAB1   <---------AHL20(1)          --------->ANAC46  --------->AHL20(2)  <-----------TBP --->ICU4    --------->AHL20(1)<----------DOF2        --------->AHL20(2) <-----------TBP   <--------- ----ATHB51 ----------->TBP--------->RAP2.3(1)      <----------DOF2<---------AHL20(2)  --------->TOE2(3) -->CBF--------->ARR11(3)--------->ANAC46--------->ANAC58  <---------AHL20(2)<---------AHL20(2)   atgtatagatatctatatatttattatccgccgctatttttagacgaaattttgctttaaattatatatatatatatatatatttataacataaacaaat  22370600                                                       --------->ANAC58                                                       --------->ANAC58                                                 <---------YAB1                                ------                                                 --------->ICU4                               -------                                               <---------ICU4                                 <------                                               --------->YAB1                          --------->ARR14(2)                                              <---------ATHB51                         <---------ARR14(2)                 <------ZmHOX2a(1)            <---------AHL20(2)                    --------->YAB1        --------->TOE2(3)                  --------->AHL20(2)        --------->ICU4 --------->TOE2(3) --------AG--------->YAB1                 --------->AHL20(2)    ----------->GT1  <-----------GT1   ttggctataacattaataaggagatagtcatggtgttttaaacaataaataatgactaagcaaataatgtgatttttaaaatttaaccatattcgattat  22370700                                                                                                -----                                                                                                <----                                                                                               <-----                                                                                               <-----          --------->YAB1                                                                       ------        <---------TOE2(3)                                                                      ------      <---------AHL20(2)                                                                   <---------AHL20(2)     --------->AHL20(2)          --------------->AGL15                                   --------->YAB1     <---------AHL20(2)          <----------DOF2 <-----------RAV1(1)                  --------->ARR11(3)     --------->AHL20(1)          ==================================================================== --->KAN4(2)                     <---------------AGL15   --------->ICU4               <---------ARR11(3) -->KAN4(1)              <-----------ARR10   <---------ATHB12                     ---------->DOF2   - ---KAN4(1)              --------->GLK1(2) --------->GLK1(1)             ----------->HVH21 <---------YAB1   tcgaaaatttaatgatatatgttcaagtatctatgcttttttcagaaatcaatgttgcaagtattagattagagagtgacacatgaaagatttataattt  22370800  Previous    Next  AGI:  At5g55080.1    Description:  ATRAN4 (RAS-RELATED NUCLEAR PROTEIN 4); GTP binding. similar to RAN3, GTP binding [Arabidopsis thaliana] (TAIR:AT5G55190.1); similar to GTP-binding nuclear protein Ran/TC4 (GB:P38548); similar to unnamed protein product [Vitis vinifera] (GB:CAO46039.1); similar to RAN [Nicotiana sylvestris] (GB:AAT40986.1); contains InterPro domain Guanine nucleotide binding protein (G-protein), alpha subunit; (InterPro:IPR001019); contains InterPro domain Ran GTPase; (InterPro:IPR002041); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras (InterPro:IPR013753); contains InterPro domain Small GTP-binding protein; (InterPro: Range:  from: 22368802    to: 22370284    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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