Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          ----------->GT1                                        --------->ANAC58  ---------->DOF2                                              --------->ANAC58 --------->AtMYB61                                             --------->ANAC46 ---------------->AG                                           --------->AtLEC2 ---->MYB83                                              --------->AHL20(2) ---->MYB46(1)                      ----------->GT1      <---------AHL20(2) ------>P                     <----------DOF2         --------->YAB1 <----------DOF2               -- --->ZmHOX2a(1)           <----------DOF2            <---------YAB1  <---------DAG2               ---   ctaccaaagcaggttataaaacatactactttctttactcgttaaaccaaaaactataataaaacatgcaactttacccaaatgttgaatttccactgaa  22358800                                           --------->ANAC58                                           --------->ANAC58                                 <---------AHL20(2)                                                <-   --------------->AtSPL8        --------->AHL20(2)                    --------->ARR11(3)          -- ------->DAG2                --------->AHL20(2)                  --------->HSFB2a(2)               <- ------->DOF2                <---------AHL20(2)     --------->MYB46(3) <---------ARR11(3)         <--   aaaagtttggaccatttcaacatttacaaaattatataaattgacaagaacacaacaactaaaacttgtagaatatctatggaatactatgtaagtttct  22358900                                                                  <---------AHL20(2)                                                                  --------->AHL20(2)                                                                --------->AHL20(2)                                                              <---------AHL20(2)              --------->AHL20(2)                              --------->AHL20(2)         <----------DOF2                                    <---------AHL20(2)         <---------DAG2                                     --------->AHL20(2)        <---------AHL20(2)   ------>ZmHOX2a(1)                                     ------->TEIL              <---------ARR11(3) --------ARR14(2)                                     <---------ANAC46           ----------->ARR10  < ------->ARR14(2)                                     <---------ANAC55(2)      --------->CCA1(2)    < --------ARR11(3)        <---------MYB46(3)  --------->MYB52(1) <---------AHL20(2) --------->ARR11(3) -------CCA1(2)<---------AHL20(2)--------->YAB1       <---------YAB1      ---------->DOF2 --------->YAB1   atatcctccaactttataaaattcgatttgttgaatcatagaagaaaaaacgaattatgtatatatatatatatacaaaagataagattttatcaaaaaa  22359000                        --------->ANAC46                        --------->HSFB2a(2)                       <---------LBD16                     <---------ARR14(2)                     --------->ARR14(2)               <------------MYB.PH3(2)               <---------MYB111(2)               <---------MYB46(2)               <---------MYB52(2)               <---------MYB111(1)              --------->At4g35610              <---------At4g35610    <---------ATHB12                 ---------->DOF2         --------->ANAC58        <---------YAB1         <---------AHL20(2)       ----------->GT1         --------->ANAC58--------->LBD16  <---------ARR11(3)       --------->TOE2(3)     <---------ICU4 ---------ANAC58 --------->MYB52(1)--------->WOX13(1)   --------->AHL20(2)     <------------CBF     - ---------ANAC58------->GAMYB <---------AHL20(2)       --------->AHL20(2)     <---------KAN4(1)     -   tggcttaacccaaggcaactaactatccggaatttatcaatcaatttcttctccatattaaattccataccataaaacgaatattgcaaaaacattactc  22359100                                            <---------AHL20(2)                                         --------->AHL20(1)                                         --------->AHL20(2)                                     <xxxx                                         <---------AHL20(2)                                  <xxxxxxx              <---------------AtSPL8    <---------ATHB12                                    <<<<<<<<<TBF1          <---------YAB1        <------ZmHOX2a(1)                                         <xxxxxxxxxx       <---------AHL20(2)   --------->TOE1(2)         ------------>CBF                 <-------------       <---------YAB1       --------->TOE2(2)<---------AHL20(2)                 <---------WOX13(1)      <---------AHL20(2)<---------AHL20(2)  --------->AHL20(2)                  <----------DOF2<<<<<<    <---------YAB1     <---------ATHB12 <---------ATHB51 <------------CBF     --------->At4g35610 <<< -------->YAB1--------------->AtSPL8    <---------AHL20(2)                    *TSS <---------ARR11(3) -------->TOE2(3)    --------->YAB1     --------->AHL20(2)              <-------TEIL ------>ZmHOX2a(2)   tatcttatttttattagtagtactaataaatctaggaaacaaataatttaaaatttgacaattgtcttcgtaaattcgtctgcttgatctcttcttcttc  22359200                                                                                                -----                                                                                                -----                                                           --------->WRKY38(1)               <-------                                                           --------->WRKY12                  --------       <<<<<<<<<TBF1                                    <---------MYB46(3)                 <-------TEIL    <<<<<<<<<TBF1                                  <---------ANAC58                        --------->ZAT18 <<<<<<<<<TBF1                                     <---------ANAC46                        <---------ZAT18 xxxxxxxxxxxxxxxxxxxsmallRNA(se3)                  <---------bZIP60(2)                    --------->ALFIN1 xxxxxxxxxxxxxxxxsmallRNA(se3)                     <---------ANAC55(1)                  <---------At4g35610 xxxxxxxxxxxxxsmallRNA(se3)                        <---------ANAC58                   <-----------RAV1(2) -----------ANAC81 ------>ZmHOX2a(1)      <----------DOF2<-------GAMYB               <-------TEIL <<<TBF1  <<<<<<<<<TBF1             ------>ZmHOX2a(1)   <---------ANAC46           <---------SPL7 <<<<<<TBF1  <<<<<<<<<TBF1         --------->TOE2(3) --------->ALFIN1          <---------WRKY38(1)   ttcttcttcttcttcttcttcctcgtcttctcaatttcctcaagctttcaatgccgtgtcgttgacaaaagattaacttgggcaacgtacaggtgcgcac  22359300                      ------>ZmHOX2a(1)                  <-----------HVH21                  <---------RAP2.6(3)                  ------>NtERF2                  --------->ORA47(1)                 --------->RAP2.6(2)                 --------->RAP2.3(2)                 --------->DEAR3(1)                --------->ATERF1(1)                --------->ORA47(2)                --------->RAP2.3(1)                --------->DEAR4(2)                <------NtERF2               --------->ABI4(1)               <---------ATERF1(1)               ------>NtERF2              --------->RRTF1(3)              --------->DEAR3(1)              --------->RRTF1(2)              <---------DEAR3(1)              --------->RAP2.3(2)              --------->RAP2.3(3)             <------NtERF2             --------->RRTF1(1)             --------->ATERF1(1)             --------->RAP2.6(1)             --------->DEAR3(2)             --------->RAP2.3(1)             --------->DEAR4(2)             --------->ORA47(2)             <---------ABI4(2)             --------->ERF1            <---------DEAR4(2)            <---------ATERF1(1)            <---------RRTF1(1)            <---------RAP2.6(1)            ------>NtERF2            <---------RAP2.3(1)                                  --------->DAG2            <---------ERF1                                      ---------->DOF2           <---------RRTF1(3)                                <------NtERF2           <---------RAP2.3(2)                            ------>NtERF2           <---------DEAR3(1)                             <------NtERF2           --------->DEAR3(1)                             <---------LBD16          --------->ATERF1(1)                             --------->LBD16          <---------ABI4(2)                               <---------At4g35610          <------NtERF2                                 --------->ATERF1(1)          --------->RAP2.3(1)                          <---------At4g35610         <---------ORA47(2)                            ------>NtERF2         <---------RRTF1(1)                           --------->ANAC46         <---------ATERF1(1)                         <---------LBD16                         --------         <---------RAP2.3(1)              ------->GAMYB--------->LBD16                       <-------         <---------DEAR4(2)               --------->DEAR3(1)------>NtERF2                    <-------        <---------DEAR3(1)               --------->DEAR3(2)<------NtERF2                    <--------       --------->ATERF1(1)               --------->MYB46(3)<---------DEAR3(1)           ------>ZmHOX2a(2) ---->ANAC58<---------ORA47(2)         <---------ARR14(2)<---------ATERF1(1)         --------->ZAT14 ---->ANAC58--------->ABI4(2)          <<<<<<<ZML2 <---------ARR14(2)           <---------REM1(2) --ZAT18<---------RAP2.3(2)            --------->ARR14(2)--------->DEAR3(1)     --------->ZAT14     = ->ZAT18<---------RAP2.3(3)    ---------->DOF2     --------->ARR14(2)           <---------ZAT14     -   gataatggagacggcgccgccgtccttggtctctaaagctagaaccgccttcaattccgccgcggctaaagcggagcgcgtcttcactgatctcaaatct  22359400                                                 <----------DOF2                                               --------->At4g35610                                               <---------At4g35610                                          <---------ANAC58                                         --------->HSFB2a(1)                                         --------->ZAT2                                         --------->HSFC1(2)                                         --------->At4g35610                                         <---------HSFC1(2)  <---------TOE2(3)                    <---------CCA1(2) ->ARR14(2)                           --------->LBD16 --ARR14(2)                         <---------LBD16    --------->YAB1 ----ARR10               <---------CCA1(2)<---------ANAC58 -CCA1(2)              <---------CCA1(2) <---------At4g35610 ==========================HOX2a_HOX2a<---------MYB52(1) ----->ZmHOX2a(2)   ------>ZmHOX2a(1)--------->ANAC46  <---------ICU4 ---------->ID1   gatcgaggttttattctatttcctcttatctctccattcccgtagcttccgcttcaatattgacttaattttgttttttttgttcttccaaattttctca  22359500                                                            <---------ANAC46                                                 --------->ARR14(2)                                                 ------->TEIL                --------------->AGL15                                                 <---------ARR14(2)          <---------------AGL15                          <---------ANAC58      <---------CCA1(2)--------->AHL20(2)                          <---------ANAC58<---------YAB1  <---------ANAC46  <-----------------AGL3                <---------YAB1      <---------ALFIN1   <---------MYB46(3)   <-----------------AGL2            <---------WOX13(1)     <---------ETT(2) <-----------RAV1(1)     ----------------->AGL3   tttactaaaatttgactgatgaatagatgcttatcgctcgacctctgattgtatctgttgttgtggattaattcgaattctatatttgggttcttctctc  22359600                                                                                             <-------                                                                                            ---------                                      --------->HSFB2a(2)                              <----------DOF2                              <----------DOF2                                        ---------->ID1                     <---------MYB52(1)                                <---------AHL20(2)   <--------                    <-------GAMYB    <---------LBD16          <------MYB46(1)       <-----------GT1                   <-----------RAV1(1)<---------HSFB2a(2)     <------MYB83      <---------AHL20(2)   ttgtcaaattcaaatctatttctgttgtttctctttgtttctggagtcaaaattcaaatctatttggtgatgttttattgattttttttcttttttaaat  22359700  Previous    Next  AGI:  At5g55060.1    Description:  catalytic. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G58510.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38932.1); contains domain PTHR21422 (PTHR21422); contains domain PTHR21422:SF1 (PTHR21422:SF1) Range:  from: 22359178    to: 22363803    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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