Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      --------->HSFB2a(2)                    <---------HSFB2a(2)                   ----------------->AGL1              <---------ARR14(2)              --------->GLK1(2)              ------->TEIL                                                                          <          ------->MYC3       <--------P                                                             <          <-------MYC3      --------->At5g28300                  <-------TEIL                      -- ---------ANAC58--------->TOE1(2)                      ----------->GT1          <---------WOX13(1) <- ---------ANAC58--------->TOE2(2)                 <---------ANAC58            --------->ATHB12   <--- --->At4g35610--------->ARR14(2)                  <---------ANAC58          <---------WOX13(1) ------ --->ZAT2----------->GT1   ----------->GT1        <---------ANAC46     --------->LBD16  --------->ANAC46   ttacttgaggcatgtgaatctgcgagaagcggtaagtccaaaaccaatacttgggtattgaaaaacatacatgcgcagattgattgatataggccagtaa  22338700   <------MYB46(1)   <------MYB83  <---------DEAR3(1)                                                                        <-------- <--------P                                                                                 --------- ---------ANAC58                <---------AHL20(2)                                         --------->ALFIN1 ---------ANAC58                --------->AHL20(2)                     <-------MYC3        <---------AtMYB61 ------->ATHB12             ----------->GT1  <---------ANAC58          ------->MYC3        <---------DEAR3(1) --------MYB46(3)           <---------ZAT6   <---------ANAC58     ------->GAMYB         <---------DEAR3(1) ------WOX13(1)         --------->REM1(2)   <---------ICU4     <-----------GT1<------ZmHOX2a(1) --->ATHB12       --------->GLK1(2)  ----------->GT1        --------->ANAC55(2)       --------->TOE2(2)   ttggttggctcttatacaagtttctgagtagagtttaaatggttaatccttgcgatatgtttatgtaacagcatatggaaggagcaaacctcggtggtgc  22338800                                                                    <---------ICU4                                                                   <---------YAB1                                                                <---------------AGL15                                                                --------------->AGL15                                                               <-----------------AGL1                                                               <-----------------AGL3  ----------->HVH21                                            <-----------------AGL2 -MYB46(3)             --------->ANAC46                      <-----------GT1           <------------CBF >ABI4(2) --------->ABI4(2) <---------MYB52(1)          <----------DOF2       <---------ANAC55(2)  --   taatatgaccggtgctatccgataaactccatttgttcagactgactgtaagtctcgtctttgtaactgattatggcaaaacgtgaatgtattggccatt  22338900                                                                                <----------DOF2                                                                              <---------YAB1                                    --------->ARR11(3)                  <---------TOE2(3)                                    <---------ARR11(3)                 <---------ICU4                                    <---------AHL20(1)                 --------->YAB1                                    --------->AHL20(1)                --------->ICU4                       ----------->GT1                                <---------ATHB12             <---------MYB46(3)    --------->YAB1                   --------->YAB1                 -- ---------->CBF      <------------CBF      <----------DOF2         --------------->AGL15        <----   tctcaatgctccttgttgttgaaaattgaaataacaaaaatatttctttttttctaagaggcattttttctaataatgttatctttctctaatcccaaat  22339000                                                                                   <--------P                                                                          --------->AHL20(1)                                                                          <---------ARR11(3)                                                                       <-----------TBP                                                                       --------->AHL20(2)         --------->AHL20(2)                          ----------->RAV1(1)  --------->ARR11(3)         --------->YAB1                    --------->TOE2(3)           <---------AHL20(2)        --------->ICU4                <---------ANAC58               ----------->TBP ----->TEIL               ------>ZmHOX2a(1)--------->TOE1(3)    --------->ZAT6  <---------TOE2(3)  -- -----ATHB12 <-----------GT1          <---------ANAC58   ---------->DOF2 <---------AHL20(2)    ------   gaatttggaaattataaaccttctaatcctacatgagtttgcttacgttaaacaacaacaaaaggaacactatatatatattcaggtagagagaacgaag  22339100                                                                                    --------->MYB52(1)                               <---------ARR11(3)                         --------->At4g35610               --------->ANAC46--------->ARR11(3)                    --------->CCA1(2)               --------->ANAC58<---------AHL20(1)                   --------->ARR11(3)     <xxxxxxxxx    --------->YAB1        ----------->GT1     ----------->GT1   ---------->DOF2     -------->P     --   <<<<<<<<<ARR2       --------->ICU4<---------TOE1(3)       --------->ANAC58    <---------At4g35610   <<<<<<<<<ARR1      <---------TOE2(3)     <---------------------WRI1    --------->ZAT2  <xxxxxxxxxx   <---------ATHB12 --------->ICU4   <---------TOE2(3) ---------->DOF2    <---------ZAT2 --------->SPL7 ---------->CBF--------->ANAC58--------->AHL20(1)   --------->YAB1  <---------ARR11(3) --------->LBD16 ----->GT1   --------->MYB52(1)--------->ICU4<---------ZAT6  --------->ANAC58    --------->ZAT2 <----   ttacaatcataagacaaacgaaataatgttgaaaatattagggtttagtggtaataacaaagtacccaaagataccagcttcgagctaccggaccatgtt  22339200                   --------->ANAC55(2)                   <---------ANAC58                                        --------->At5g28300            --------->ARR14(2)                --------->ANAC58            --------->LBD16     ---------->DOF2                        --------->TOE1(2)             ----------->GT1   --------->ZAT14 <---------ANAC58         ------->GAMYB                <---------HSFB2a(2)   <---------ZAT14------->TEIL             --------->MYB46(3)            --------->HSFB2a(2) xxxxxxxxxxxxxxsmallRNA(si3) --------->ANAC46 --------->ANAC58          <---------LBD16           <-- ------->ZAT6 <---------------AtSPL3      --------->ANAC58          <----------DOF2            <----- xxxxxxxxxxsmallRNA(si3)     --------->O2 --------->ANAC58     ---------->DOF2                 <----- -------GT1 <---------ARR14(2)     ---------->DOF2          --------->TOE2(3)          <-------TEIL   accactatagagcgaaactgtacgtgtttccacgagtcaaagacaaccaaggaaggcattaatctcaaagcttttccggtaaaatcaaattcgttttcct  22339300                                       <------ZmHOX2a(2)                                      <---------ARR11(3)                                      --------->ARR11(3)                                      <---------ARR14(3)                                      --------->ARR14(3)                                      <---------AGP1                                      --------->ARR14(2)                                      <---------ARR14(2)                                     --------->RVE1(1)                                  ---------->DOF2                                 --------->ICU4          <---------YAB1    ----------->GT1                   <-----------GT1       <---------AHL20(2)   <------MYB83------>ZmHOX2a(2)   <----------DOF2                      ---- ---------HVH21             <------MYB46(1)           <---------GLK1(2)                   <---------HSFB2a(2) ----ANAC58                --------->MYB59            <---------ARR14(2)              <----------DOF2 ----ANAC58        ----------->GT1--------->YAB1      --------->ARR14(2)   <-------TEIL   --------->HSFB2a(2)   tgtcagtaatttatgaaaaactcgaaaatttggtaataaagatctcgctgaacacatattctctttacgacttcaaattcgtttcaaactttctcgatag  22339400               <----------DOF2               <---------DAG2    --------->ANAC58                 --------->AHL20(2)    --------->ANAC58              <---------ICU4                                                 <---  <<<<<<<<<WRKY18        <---------YAB1                                              ---------->DOF2 --------->WRKY18(1)   --------->YAB1<---------AHL20(2)      --------->TOE1(2)  ---------->DOF2 <---- ------>DOF2<-----------GT1    --------->YAB1              <---------ATHB12   <---------AHL20(2)-----   aaagtcaaggcaaattacttttctattatgttttcatatttatttcaattactaaatatcaaacattcgattgtatgtattaaaaagaaaagaagaaatt  22339500             <---------ICU4             --------->YAB1            --------->ICU4            <---------YAB1           <---------AHL20(1)           --------->AHL20(1)           <---------AHL20(2)           --------->AHL20(2)          --------->YAB1               <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)          <---------ICU4              <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         --------->ICU4              <----------DOF2         <---------YAB1              --------->TOE2(3)       --------->YAB1             <---------ARR11(3)       <---------ICU4             --------->ARR11(3)      --------->ICU4             <---------GLK1(1)                     <----------DOF2      ------>ZmHOX2a(1)      <---------YAB1             --------->GLK1(1)       <---------ARR11(3)                 <--------    --------->YAB1            --------->ANAC46   ---------->DOF2 <---------ARR11(3)      <-----------GT1   <---------YAB1             --------->ANAC58--------->ANAC46   --------->ARR11(3)     <-----------GT1 ------AHL20(2)               --------->ANAC58<xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <---------AHL20(2) -----AHL20(2)         <---------AHL20(1) <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    <----------DOF2 ---->AHL20(2)         <---------ARR11(3) xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    <---------DAG2      -   tttttttgataattataattagcaatatatacaagaaatctttaatacacttaaggcaataacttaaaatcttcttttctcacttttttatttcctatct  22339600  Previous    Next  AGI:  At5g55000.1    Description:  FIP2 (FH protein interacting protein 2); voltage-gated potassium channel. similar to thylakoid lumenal 15 kDa protein, chloroplast [Arabidopsis thaliana] (TAIR:AT2G44920.2); similar to hypothetical protein OsI_009843 [Oryza sativa (indica cultivar-group)] (GB:EAY88610.1); similar to Os03g0157500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049015.1); contains InterPro domain Potassium channel, voltage dependent, Kv, tetramerisation; (InterPro:IPR003131); contains InterPro domain Pentapeptide repeat (InterPro:IPR001646); contains InterPro domain BTB/POZ fold; (InterPro:IPR011333); contains InterPro domain BTB/POZ-like; (InterPro:IPR0002 Range:  from: 22335536    to: 22338973    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g55010.1    Description:  unknown protein Range:  from: 22339126    to: 22339455    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version