Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       <---------------AGL15                          ------>ZmHOX2a(1)          <---------MYB59                                         <---------ICU4          --------->TOE2(3)                                  <---------YAB1       <-----------GT1    <---------TOE2(3)             --------->ANAC58   <---------ARR11(3)--------------->AGL15              --------->ANAC58              --------->ZAT18 ------->ANAC55(2)<-----------GT1    --------->AHL20(2) ----------->GT1<---------AtLEC2          <---   tacatgattttacctaaatactaccatttatgtaaatctataaatatcagtttatagcaagttataaatccttacatggattaacaggtgtacaaaattt  22334300                                                        --------->ARR14(1)                                                       --------->ARR11(1)                                                       <---------ARR11(3)                                                       <---------ARR14(2)        <---------AHL20(2)                             --------->ARR14(2)        <---------ICU4                                 <---------GLK1(2)       --------->AHL20(2)                          ---------->DOF2                         <---------HSFB2a(2)     --------->YAB1                  <-----------GT1   --------->ARR11(3)            <---------------   --------->AHL20(2)  --------->AHL20(2) ---------->DOF2                      ---------->DOF2 --------GT1   ---------->DOF2<---------ZAT6----------->GT1                   --------->YAB1      ---   tacaaaataataaatacaaaagcattgaaatagtgtttttaaccaaaagaaaaaaaagatactgtaatctatagaaagaatcaaagtgaagttgcagaaa  22334400                                                          --------->ZAT18                                                     --------->AHL20(1)                                                     --------->ARR11(3)                                                     <---------AHL20(1)                                                     --------->AHL20(2)                                                --------->MYB46(3)                                               ------>MYB46(1)                          --------->AHL20(1)   ------>MYB83                          <---------AHL20(1)  ----------->RAV1(1)                          --------->AHL20(2) ------->GAMYB<---------ZAT18                          <---------AHL20(2) --------->AtMYB61                         <---------AHL20(2) --------->MYB46(3)                         --------->AHL20(2) <---------MYB55(2)       ----------->GT1                     <---------AHL20(2)     <---------MYB52(2)   <---------YAB1                  --------->ATHB51 <---------TOE2(3) <---------ARR11(3)      ------>MYB83--------->AHL20(2)  --------->ALFIN1 <------------CBF      ------>MYB46(1)--------->AHL20(2)    --------->ANAC58   --------------->AGL15    <---------MYB59  <---------AHL20(1)    --------->ANAC58   <---------------AGL15       <---------- --------TaNAC69(2)  --------->AHL20(1) <------NtERF2<---------AHL20(2)             <------------CBF ------->DOF2<---------ATHB12      --------->DAG2   --------->AHL20(2)         --------->YAB1       -   taaagaccaaatcaaatgaataatttattaaattgataaggtggcaaccaacaaatatattgcacttaatatagtaaaaaatcatacattgctgtcagtg  22334500                                <---------ANAC58                                <---------ANAC58                        <----------DOF2                                <---------ANAC46                       <---------------AGL15                              --------->ARR11(3)                       --------------->AGL15                         <---------AHL20(2)                --------->REM1(1) -HVH21                  --------->AHL20(2)        ------>ZmHOX2a(1)   --------->TOE2(3) ---------->GT1      <-----------TBP         ------->TEIL------>ZmHOX2a(1)               --------->ICU4   agtagtaaaccaagtagtcacccatatataaatttcttgaaaatatgaaactcctaatcctacatgacttaaaccttttttagataatttcattatcaaa  22334600                                                                           ==========================                                                                          <------ZmHOX2a(2)                                                                          --------->CCA1(2)                                                                         --------->AGP1                                                                         --------->ARR11(3)                                                                         <---------AGP1                       --------->ARR11(3)                                <-----------ARR10                       <---------ARR11(3)        ---------->DOF2         <---------ARR11(3)                      <---------CCA1(2)    ----------->GT1          --------->TOE1(2)              <-----------GT1     ------------>CBF                  --------->TOE2(2)        ------------>CBF         ----------->RAV1(1) <---------------AtSPL8------>ZmHOX2a(2)   tggctattctttcaattcacccttatatctttgcacaacaatagagagagaaaaagaagttcaaaaaaaacataagatctaattaagagaggtttttggt  22334700                          --------->YAB1                         --------->MYB46(3)                         <---------ATHB12                        ------>MYB46(1)                        ------>MYB83                      <---------MYB111(1)                      --------->AtMYB61                                --------->ANAC58                      <---------MYB46(2)                               --------->ANAC58                      <---------MYB111(2)                            --------->MYB52(1)                      --------->MYB46(3)               <---------At4g35610                      <---------MYB55(2)               --------->At4g35610                 --------->AtMYB61                ------->TEIL      ------->GAMYB                --------->ANAC46             --------->YAB1        <---------MYB52(2)              <-           <-------TEIL -------->P         --------->ANAC58        --------->MYB46(3)             <--     ------>ZmHOX2a(1)--------->DEAR3(1)   --------->ANAC58   --------->TOE2(3)                <----- --------->ARR14(2)--------->ANAC46  --------->At4g35610      --------->TOE1(3)              <------- ===========HOX2a_HOX2a--------->MYB55(1)  --------->ANAC46   --------->AtMYB61  ------>ZmHOX2a(2)<--   ctagttcctctggttcataccacaccaaccatgaagaacagctacaagcatgaactcatctcaacctcaacgaacgaaactgatcgagtcattaatcgtt  22334800                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                             <-------      --------->LBD16                                                                        <-------     <---------HSFB2a(2)                                                                ------>MYB46(1)     --------->HSFB2a(2)                                                                ------>MYB83     --------->ANAC46                     <---------GLK1(2)                            --------->ANAC46    <---------LBD16                      --------->HSFC1(2)                            --------->ANAC58 ---------DOF2                    <---------At4g35610         <-------TEIL             --------->ANAC58 -------ANAC58                    --------->At4g35610       --------->ARR14(2)        --------->MYB46(3) ----MYB52(1)       ---------->DOF2      <---------HSFC1(2) <---------GLK1(2)       -------->P   <--- --ICU4   ---------->DOF2    --------->WOX13(1)             <---------ARR14(2)     <-----------GT1 -------ANAC58  ----------->RAV1(1)   ---------->DOF2    --------->YAB1     --------->YAB1  <--------   gctttctccggaaaaagaccacaaaagaagtcattcatctcaaagcttctcaggtcgaatcagattcgtattccttcatcgtaacttaccagccaaatct  22334900         --------->AtLEC2     <-----------TGA1   <-------TEIL --------->ARR14(2) <---------GLK1(2)                                           ------>ZmHOX2a(2) <---------ARR14(2)                                        <---------ARR14(2) ->ARR14(2)                                                --------->ARR14(2) --ARR14(2)                                        --------->TGA2(2) ----ARR10                                        <-----------TGA1 ->ARR11(3)                   ------>MYB46(1)     <-----------HVH21 --ARR11(3)   <---------ARR11(3)                 --------->ANAC46                                   < --ARR11(1)   --------->GLK1(2)                  --------->ANAC58    <---------AHL20(2)             < ------LBD16  --------->ARR11(3)                 --------->ANAC58    --------->AHL20(2)             < -CCA1(2)<---------YAB1       ------>MYB83      ------->TEIL<------ZmHOX2a(2)                    <---   tcggattcgtcatgaaaatctcgatggacaccaacttaagaccactcttgaacgtcatcccgatcgtgtatttaaactcgaagacaacatcccaaaacag  22335000                                    <---------ARR11(3)                                    --------->ARR11(3)                                   --------->YAB1                                  <---------YAB1                                  --------->ICU4                               --------->TGA2(2)                              <-----------TGA1               --------->ANAC46                             --------->ANAC55(1)             --------->ANAC58                             --------->ANAC46               <---------LBD16                             --------->ANAC55(2)       ------->TEIL                             --------->ANAC58         <---------CCA1(2)                             <---------ANAC55(2) <---------DEAR3(1)                             --------->O2      <---------RAP2.3(1)           --------->ANAC58  <<<<<<<<<<HY5    <---------At1g77200           --------->ANAC58  --------->ANAC58 <---------RAP2.3(3)           --------->ANAC46  --------->TGA1a  <---------DREB2C(2)    <---------CCA1(2)        --------->bZIP60(2)<------NtERF2--------->ANAC58    ---------->ARF1          <---------O2     <---------DEAR3(1) ---------ANAC58            <-----------STF1  --------->ETT(1)--------->LBD16               --------- ---------ANAC46     <---------ANAC58         <---------DEAR4(1)                         <---------MYB52(1) ---------ANAC58     <---------ANAC58        --------->RAP2.6(3)                        <-------GAMYB ------GLK1(2)       <---------ANAC46       <-----------HVH21--------->LBD16            <-----------HVH21   tttcttgtctctcaagaaacatgccttgaacacgtcatgatcatcttgtcggcgatgtatctcccgcaaactattcaagaacgtcttgtccgttacatct  22335100                                  <---------ARR14(2)                                --------->LBD16                              --------->At4g35610                              <---------LBD16                              ------>NtERF2                              <---------At4g35610                            --------->ATERF1(1)                            <---------DEAR3(1)                           <---------ZAT2                                   --------->TGA1a                           --------->ZAT2                                   <---------O2                           --------->At4g35610                              <---------TGA1a                           <---------At4g35610                              =========================                          --------->RAP2.3(2)                               <---------ANAC46                          --------->DEAR3(1)                                <---------bZIP60(2)                          <---------DEAR3(1)                                --------->O2                       ------->GAMYB<-----------RAV1(2)             ==================bZIP_DOF                       --------->ANAC46                           --------->DOF5.7(2)                       --------->DEAR3(1)                        --------->TOE2(3)                    <---------ARR14(2)                         <---------TOE1(3)        <-----------HVH21--------->RAP2.3(1)                   <---------TOE2(3)    --------->ARR14(2)<------------AtMYB77         <---------TOE2(3)---------->DOF2                 <    --------->GLK1(2) --------->DEAR3(2)           <---------TOE1(3)<---------DOF5.7(2)           ---    <---------ARR14(2)--------->MYB46(3)  <------ZmHOX2a(1)   <---------DOF5.7(2)               <---- ------->GAMYB      --------->ARR14(2) <------ZmHOX2a(1)     --------->WRKY12          <---------MYB46(3) >REM1(1)<---------MYB52(1)------>NtERF2--------->ALFIN1     ----------->TGA1 --------->ALFIN1<------ZmHOX2a(1)   caaccgaatccgtcaagttcagaaaccgccgctgcggaacaggaggaggtttgaaggtagaagttgacgttaaagtcgacgtggaacaatgggtgaggat  22335200  Previous    Next  AGI:  At5g54990.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT4G18110.1); similar to hypothetical protein OsI_016592 [Oryza sativa (indica cultivar-group)] (GB:EAY95359.1); similar to Os04g0590900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053709.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 22334731    to: 22335411    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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