Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       --------->MYB52(1)                                                    --------->DEAR3(1)                                                    --------->MYB46(3)                                                    --------->DREB2C(2)                                                    --------->At1g77200           <---------ALFIN1                      --------->DEAR3(1)            ----------->HVH21            ------>MYB83                      <-------PIF5                  ------->GAMYB         --------->ANAC46          -                     <---------LBD16               --------->DEAR3(2)     --------->ANAC58   ------>ZmHOX2a(2)                     --------->DEAR3(2)         --------->MYB46(3)     <---------SPL7       ---------                  <---------ABI4(2)            <<<<<<<<<GATA-4        --------->ANAC58      <------ZmHOX2a(2)                  --------->MYB46(3)           <<<<<<<<<GATA-2   --------->MYB52(1)        --------->AGP1                 --------->ANAC58         --------->ANAC58    --------->ANAC58   ------>MYB46(1)    -           --------------------->WRI1     --------->ANAC58   ------->TEIL --------->ANAC58 --------->ARR14(2)      --------->GLK1(2)                   --------->ANAC46  <---------DOF5.7(2)  -------->P<---------ARR11(3)     --------->ARR14(2)      ------>ZmHOX2a(2) <<<<<<<<<GATA-3--------->ANAC46  ----------->RAV1(1) <     <---------ARR14(2)     <------ZmHOX2a(2)  <<<<<<<<<GATA-1--------->ANAC58 --------->AtMYB61 <---     <---------GLK1(2)------->PIF5     <---------ZAT14     <---------WRKY38(1)--------->MYB46(3) <---    <---------At4g35610--------->LBD16 --------->ZAT14   --------->At5g28300 ------->TEIL  <---------ARR14(2)   ----------->ARR10--------->MYB52(1) <---------ZAT18 <---------DEAR3(1)------->TEIL      --------->ARR11(3) ------>At4g35610--------->ANAC58  --------->YAB1  --------->MYB46(3) --------->ANAC58--------->LBD16   agaggcagattctcactgtaagcaccggcgatcgcattcagaacactcaatccaccgacggtgaacgtaacgacgcacgcaccaacaccgcgagatctag  22329600               <---------ARR14(2)               --------->ARR14(2)               --------->GLK1(2)        --------->ZAT2        <---------At4g35610        <---------ZAT2        --------->At4g35610                                             <------MYB46(1)     <---------MYB52(1)                                                 <---------ANAC55(2)    <-----------HVH21                                                   <------MYB83    <-----------TGA1                                                    --------->ANAC55(2)   --------->ANAC46                                        <---------MYB46(3)  --------->HSFB2a(2)   ------->GAMYB <---------LBD16                     <---------TOE2(3) --------->MYB46(2)  --------->MYB46(3)                            --------->At4g35610<---------MYB46(3)   <-----------RAV1(2)  <------------AtMYB77                          --------->ZAT2 <---------DEAR3(1)     <-----------HVH21 -------->ARR14(2)   <---------ANAC46    --------->MYB46(3)<------MYB46(1)     <---------HSFB2a(2) >CCA1(2)   <---------ANAC46            -------->P   <---------TOE1(3) --------->MYB111(1)----------- -------->MYB52(1) --------->LBD16    --------->MYB46(3)   <------MYB83--------->MYB59<-----------TGA1 ---------ARR14(2)--------->ANAC46   --------->At4g35610  --------->MYB59 ----------->HVH21 ------ANAC58 <---------CCA1(2)<-------GAMYB <------ZmHOX2a(2)--------->SPL7  ======================= ------ANAC58 <---------ARR14(1)     <---------At4g35610  <---------AtMYB61   ------>ZmHOX2a(2)   cgtaaccgtcagcagcgtatccggcgttaagctcgttgcagcaaccgatcagcttgaggtttggttcggcgattaggtgatcgagaagcgtcaggttgaa  22329700                                                                                                  ---                                                                                    --------->MYB52(1)                                                                                   <---------SPL7 ---                                                                                 <---------At4g35610                                                                         <------NtERF2            <--                                                                       <---------ANAC58        <-----                                                           ------->GAMYB<-----------HVH21      <-----                                           ======================================MYC_MYB  <---------MYB46(3)                                          --------->MYB46(3)           <---------O2----------->HVH21                                      <---------MYB52(2)   ======================MYC_MYB  --------->MYB55(2)                               <---------ARR14(2)       --------->MYB52(1)     ------->PIF5 ---------                            <------NtERF2 <------------AtMYB77         --------->TGA1a<---------DREB2C(2)                           ------>NtERF2 <---------At5g28300    ----------->ARR10--------->At4g35610<                          <---------bZIP60(1)        <------MYB83      <---------TGA1a<---------DEAR3(1)                          <---------ANAC46=======================================MYC_MYB <---------DEAR3(1)                         --------->ATERF1(1)     <---------STY1(2)     --------->O2----------->TGA1 <      --------->MYB52(1)<---------ATERF1(1)------->GAMYB<---------DOF5.7(2)    <-------PIF5 <--------   --------->ANAC46    ----------->TGA1  ========================================MYC_MYB --------->ALFIN1 >GT1<------ZmHOX2a(1)<-----------HVH21  -------->P  <------MYB46(1)   <---------ANAC58  <---------AtMYB61 ===========HOX2a_HOX2a----------->HVH21--------->MYB52(1)--------->MYB46(3)<-----------RAV1(2)<-----   atcaccaggaacggagaagacatcggtgacgccgatttcgactaaccgtcttgctaggtaacggccaagagtcgcgtcgcaggggctgacggtggtggag  22329800                                                              <------MYB83                                                              <---------MYB46(3)                                                              <------MYB46(1)                                                             <---------AtMYB61                                                             --------->MYB55(2)                                                             --------->MYB111(2)                                                             --------->MYB111(1)                                                             <---------MYB46(3)                                                           <-------GAMYB               ------>ZmHOX2a(2)   <---------ZAT18                                        <---------MYB46(3)          <------ZmHOX2a(2)   --------->ZAT18                           --------->MYB46(3)     <-----------HVH21 --------->ARR14(1) ------>ZAT14                              <---------PCF5 --------->MYB55(2)          --------->CCA1(2) ------>ZAT18                       <---------MYB52(1) <---------ANAC58              <---------ARR14(2) -------ZAT14                      <---------SPL7      <---------ANAC46              --------->ARR14(2) ----ANAC58                     --------->LBD16        <---------ANAC58        --------->ETT(2)  <--- ----ANAC46                     ------>NtERF2--------->DEAR3(2)    ----------->GT1   --------->AGP1 >ALFIN1                       --------->ANAC46     --------->GLK1(1)         <------NtERF2 ------>ZmHOX2a(2) ---------ANAC46               --------->DEAR3(1)  --------->ARR14(2)     --------->ANAC46 <------ZmHOX2a(2) ---------bZIP60(2)          <---------ATERF1(1)   <---------ARR14(2)     --------->ANAC58<---------ARR14(2) -ANAC46                   --------->ATERF1(1)--------->DEAR3(1) --------->ETT(1)  ----------->ARR10- ----ANAC58           --------->ALFIN1     <------ZmHOX2a(1)<--------P    --------->ANAC58--------->ARR14(2)   tgaagtggacttgtgttttgaacggtggagactccgccgtttggaggaccgccgatatcgtggttggtcgggttacacgcgtcgatagatccgatcttag  22329900                          <---------HSFB2a(1)                          --------->HSFC1(2)                          --------->HSFB2a(1)                --------->MYB52(2)               <-------TEIL              <---------MYB52(1)            <---------HSFB2a(1)                                              --------->ZAT14            <---------ANAC58                                                 <-------TEIL          <---------DOF5.7(2)                                            <---------------AtSPL8      <---------ZAT6      <---------HSFC1(2)                            ---------->DOF2 ------ZAT6 <---------ANAC58                  --------->YAB1  <---------ZAT2 <---------ZAT14 ---------------->AGL1  <---------GLK1(2)  --------->CCA1(2)  --------->At4g35610      *TSS        <-   tgtccatagtggtaacgttcgtttcagaattttcgaacaatagagctatgagaaaattggagagagctcgaggtaaaagtacagtttgaaatatgagatt  22330000                                                                                               <-----                    --------->ANAC46                                                           <-----                    ----------->GT1                                                           -------              --------->AHL20(2)                                               <---------CCA1(1)              -------->HAHB4                                                   <---------RVE1(1)              --------->YAB1                                                  <---------ARR11(3)          --------->AHL20(2)                                                  <---------AHL20(1)          <---------AHL20(2)                                         <------NtERF2            <------        <---------ANAC55(2)           ---------->DOF2                <---------At4g35610      -------        --------->ANAC55(2)        <------NtERF2                    ----------->GT1           <------     --------->ARR14(2)           ------>NtERF2                     ------>NtERF2          <------NtERF2     --------->ARR11(3)           <---------MYB46(3)               <---------RAP2.3(2)    --------->LBD16     <---------ARR11(3)          <---------DEAR3(1)                <---------RAP2.6(2)   --------->DEAR3(1)     <---------ARR14(2)        ------->GAMYB          <---------MYB46(3)      --------->ARR11(3) --------ZAT6<---------YAB1 --------->MYB52(1)  --------->MYB52(1) <---------DEAR3(1)    --------->RAP2.6(2)   agtggaagatacttaattatagacgtaaaacaacggtggctaaagtaatcaaacggtggtatgaaataggcggctaataagatatttttagccgcagata  22330100                           ------>ZmHOX2a(1)                          <---------------AGL15                          --------------->AGL15                         ----------------->AGL2                         ----------------->AGL3                     ------->MYC2                     -------->ABF1                     <-------MYC2                     ------->MYC3                     ------->MYC4                     <-------MYC3                                                                <---                     <-------MYC4                                                                ----                    <---------ANAC55(2)                                                          ----                    <---------O2                                                                 <---                    =================================================bZIP_DOF                   <---- ----CCA1(1)        --------->O2                                                                ----- ----RVE1(1)        --------->TGA1a                                                     --------->LBD16 -->ARR11(3)        <---------TGA1a                                                     <---------At4g35610 ---ARR11(3)        --------->ANAC55(2)                                                 --------->At4g35610 -->ARR14(2)        <--------ABF1                               <---------DOF5.7(2)     <------NtERF2 ---ARR14(2)  <---------WOX13(1)       --------->ARR11(3) ---------->DOF2             --------->ZAT18   tttatgtgtctctgagattgacacgtgtccttatatagttggatattggagaacaagttagaaagttcacgttgagaatagttgtgagtccgcagagaat  22330200                                                                              ------->MYC3                                                                              <-------PIF5                                                                              <-------MYC3                                                                              ------->PIF5                                                                <---------ANAC46                                                                --------->MYB52(2)                                                                <---------ANAC58                                                                <---------ANAC58                                                               <-------TEIL   <-------MYC2                                                              --------->ARR14(2)                                                             <---------MYB52(1)----------->HVH21                <---------ZAT18                           <---------LBD16     ------->MYC2              <---------ATERF1(1)                     <---------ETT(1)       <---------TGA1a --------              <---------At4g35610                     ----------->HVH21      --------->ANAC46<-------              ------>NtERF2 --------->ATHB12         --------->DEAR3(2)      =====================bZIP_DOF              --------->At4g35610                    ------>ZmHOX2a(2)       =====================bZIP_DOF         <---------------------WRI1                 <------ZmHOX2a(2)        --------->ANAC55(2) ------ICU4 --------->ATERF1(1)                    <---------ARR14(2)        <---------ANAC55(2) ----->ATHB12--------->RAP2.3(3)                   --------->ARR14(2)        --------->bZIP60(2) ----->ATHB51--------->DEAR3(1)  <------ZmHOX2a(1)<------ZmHOX2a(1)          --------->TGA1a <------- -----ATHB1 --------->ORA47(2)   ===========================HOX2a_HOX2a      <---------O2    -------- -----YAB1 --------->At4g35610   ==========================HOX2a_HOX2a       --------->O2  <---------GLK1(2) ---->ICU4--------->ANAC46 <---------YAB1    --------->CCA1(2)<---------ARR14(2)       ---------->DOF2   aattgctctcatgcgcagcccacaagggcatcataggacccgattggatataggatccgacccggttcgtgtcaataccacgtgactcaaaaagaaactc  22330300                                                                 ------>NtERF2                                                                 --------->At4g35610                                                                --------->DEAR3(1)                                                               --------->DEAR4(2)                   -                                                              ------>NtERF2                      ----                                                             --------->ANAC46                  ------                                                            <---------LBD16                   <------ZmHOX2a(2)                                                         <-----------GT1 ------------>CBF    <-------                                                      <---------GLK1(2) --------->ANAC58     <-------                                               ---------->DOF2--------->LBD16                --------        ------>NtERF2   ---------->DOF2        --------->MYB52(1)<---------At4g35610 --------->GLK1(2)       <---------RAP2.6(2)                    ----------->HVH21<------NtERF2  --------->YAB1 -------- ->HSFB2a(1)         --------->TOE1(3)       <---------MYB52(2)--------->RAP2.3(1)   <---------ARR14(2) --HSFC1(2)<----------DOF2             <-----------GT1<---------ARR14(2)--------->ANAC58   ---------- --HSFB2a(1)         --------->TOE2(3)<-----------GT1xxxxxxxxxxxxxxxx>smallRNA(s)    --------->ARR14(2) ->HSFC1(2)<---------DAG2            --------->GLK1(1)--------->ARR14(2)--------->ANAC46 --------->LBD16   ccgctcttggcgacttttcgaaaccctaaagagactcgtatttcccccctaacgccgattttcccgccgctctcactcaattacaaaaatccgtagatcc  22330400              <---------ARR14(2)         --------->YAB1      --------->WOX13(1)    ------------>CBF   <---------GLK1(2) -------->ARR14(2)   ------------>CBF -------->CBF <---------ARR11(3) >ZmHOX2a(2)  --------->ARR14(2)                     --------->GLK1(2)             ------>MYB46(1)  - --ARR11(3)   --------->ARR11(3)                    <---------GLK1(2)      --------->TOE1(3)        < --ARR14(2)  <---------CCA1(2)                      <---------ARR14(2)     --------->TOE2(3)       <- ->ARR11(3)--------->ANAC55(2)                      --------->ARR14(2)   ------>MYB83<---------ATHB12 ->ARR14(2)<---------ANAC55(2)      *TSS      --------->YAB1             ------>MYB46(1)--------->DOF5.7(2) ->ARR10<---------ATHB12     <----------DOF2 <------ZmHOX2a(2)   <----------DOF2   ------>MYB83  <---   ccaatctccaatcacatatctcccacaatctctttctcgctctctcgatcatcagattcttcaatctctttcaccaagcttaaccaaatcgttaccatga  22330500  Previous    Next  AGI:  At5g54960.1    Description:  PDC2 (PYRUVATE DECARBOXYLASE-2); pyruvate decarboxylase. similar to PDC3 (PYRUVATE DECARBOXYLASE-3), pyruvate decarboxylase [Arabidopsis thaliana] (TAIR:AT5G01330.1); similar to pyruvate decarboxylase, putative [Arabidopsis thaliana] (TAIR:AT4G33070.1); similar to pyruvate decarboxylase, putative [Arabidopsis thaliana] (TAIR:AT5G01320.1); similar to pyruvate decarboxylase [Fragaria x ananassa] (GB:AAL37492.1); similar to pyruvate decarboxylase 1 [Lotus corniculatus] (GB:AAO72533.1); similar to pyruvate decarboxylase [Fragaria x ananassa] (GB:AAG13131.1); contains InterPro domain Thiamine pyrophosphate enzyme, N-terminal TPP binding region; (I Range:  from: 22327913    to: 22329987    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g54970.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G26960.1) Range:  from: 22330436    to: 22330990    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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