Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   --------->LBD16                                                                               <---------LBD16                                                                              --------->MYB52(1)                                                 --------->ANAC46        ----------------->AGL1                                        --------->At4g35610              ----------------->AG                                        --------->ZAT2                 ------>MYB46(1)                                        <---------At4g35610            ------>MYB83                           --------->ANAC58      <---------ALFIN1    --------->AtMYB61                       --------->AtLEC2 --------->HSFC1(2)           --------->MYB46(3)                <---------ANAC58        <---------HSFB2a(1)          <---------MYB46(2)                <---------ANAC58        --------->HSFB2a(1)          <---------MYB111(1)              --------->ANAC58          <---------HSFC1(2)          --------->ANAC58      <---------HSFB2a(1)  --------->ANAC58    <---------ALFIN1     --------->ANAC46      --------->HSFB2a(1)<---------AtLEC2      --------->ANAC46     --------->ANAC58     --------->SPL7  <---------ANAC58<---------At4g35610          --------->ANAC46                  <     ------->TEIL    <---------ANAC58--------->At4g35610          --------->REM1(1)                <- ------->DOF2 --------->ANAC58   <-----------HVH21          ------->GAMYB----------------->AGL2 -----   gagagcgaacgttgggacgcttgccttgcaagacccatcagcagcttccacacaccttgcaatcgcctacaccaaaccaataccggaatcaaattcactt  22301400            <---------MYB52(1)         <---------LBD16  --------->DEAR3(1)  ------->GAMYB           --------->LBD16 --------->DEAR3(2)      <---------ANAC58 <------------AtMYB77    <---------ANAC58 --------->MYB46(3)      <---------ANAC46 ---------At5g28300      ----------->GT1                        <---------YAB1 ----------GT1   <----------DOF2                          ------->TEIL                     ---------- ---->YAB1 --------->LBD16--------->At5g28300   --------->TOE2(3)            ---------->DOF2      ---   ataaccgcccttccggtttctttcatgccgtgaaaccatttgtgtatcgacctcaatatgcaccttcttattgctgattcaaagacaccttgtaaaagtc  22301500                                                                    <---------REM1(1)                                                         --------->DAG2                                                        ---------->DOF2   <------ZmHOX2a(1)                                                     --------->TOE1(3)    --------->YAB1           --------->ZAT6                            --------->TOE2(3)  <---------TOE2(3)        ---- >DOF2----------->GT1        ----------->GT1    =================================HOX2a_HOX2a   <----- --->ZmHOX2a(1)            <---------GLK1(1)    <------ZmHOX2a(2)  <---------TOE2(3)       --------->AHL20(2)   cttgtaagttgtaatactaactagtttggatttgtgaaatgctaatatggatcaagcttaaagtgttttgatgtaaggataagagaagtttgtttatata  22301600                                                        =============================================                                                     ----------->GT1                                                     <------MYB83                                                     <------MYB46(1)                                               <---------LBD16                                              <---------ANAC58                                              <---------O2                                  <--------                                              =====================bZIP_DOF                 <--------                                              <---------bZIP60(2)                           >>>>>>>>>                                              --------->O2                                  <--------                                              <---------ANAC46                              <--------                                              <---------ANAC58                              ---------                                              <---------TGA1a                               <--------                                           ----------->TGA1                                 ---------                                           ----------->HVH21                                <--------                                           --------->ALFIN1                                 <--------                                          <------NtERF2 ---------->DOF2                     <--------                                          --------->ATERF1(1)                              ----------                                          --------->At5g28300                              ----------                 =======================================bZIP_DOF                   ------>ZmHOX2a(1)           =============================================bZIP_DOF               <---------PCF2           <<<<<<<<<<<<WRKY18             <-----------HVH21             <---------YAB1    <---------TGA2(2)           ---------->DOF2               <---------ATERF1(1)       <---------AHL20(2)    ----------->HVH21   <----------DOF2                       <---------DEAR4(2)       <---------AHL20(1)     ----------->TGA1 ------>DOF2     ---------->DOF2        <---------DREB2C(2)       --------->AHL20(2)   <---------At4g35610 ----AHL20(2)   <---------WRKY12        <---------DEAR3(1)        <---------AHL20(2)   --------->At4g35610   aaagtctttagtcaaaagtcaaagggagactagtctcacaaggcggtgacgggggaggtaaagaacaattaattttgaatgggtcctacagatgacgtgt  22301700 =bZIP_DOF -ANAC55(1)                                                                          <---------At4g35610 -ANAC58                                                                             --------->At4g35610 >HY5                                                                              <---------WRKY38(1) -bZIP60(2)                                                                        --------->ZAT14 -ANAC55(2)                                                                  <-----------TGA1 >ANAC55(2)                                                      <-----------TGA1  <---------ZAT14 -ANAC46                                                <---------ARR11(3)   <-----------HVH21 >O2                ------->MYC3                        <-----------GT1     <---------ANAC46 -TGA1a             <-------MYC3                        --------->ARR11(3)  <---------ANAC58 -O2               --------->O2                        --------->RVE1(1)    <---------ANAC58 <------- -ANAC58     <---------WRKY12                    ----------->GT1--------->YAB1     <---------WRKY12 ->bZIP911(2)<---------WRKY38(1)            ---------->DOF2   --------->ARR14(2)--------->WOX13(1) ->STF1     --------->WRKY18(1)      <---------ANAC46  --------->CCA1(1)<----------DOF2------->GAMYB   tcaaatgttatagggtcaacaacgtgtctcaagtattttgctgggagaaagacgaaaatatccctatcgtcattctttgcgtcagtcaactgaaaaattg  22301800                 --------->ANAC58                                                               <----                 --------->ANAC58                                                              ------       *TSS    ---------->DOF2                                                            <---------At4g35610      <---------HSFB2a(2)        --------->GLK1(1)                                 --------->GLK1(2)      --------->HSFB2a(2)        <---------GLK1(1)                                <---------GLK1(2)  <---------ANAC46         --------->TOE2(2)                                      <---------ARR11(3)  <---------ANAC58         --------->TOE1(2)                                    ----------->ARR10 ---  <---------ANAC58    <---------ATHB12     ----------->GT1              <---------ANAC46  --------->At4g35610 -----CBF     <------ZmHOX2a(1)<------ZmHOX2a(1) --------->YAB1      ----------->HVH21 <---------At4g35610   aatttcgtctagacgaggaaagcaataaatctaggaaatcaaaaatcgttataagaagaaacagagaggttgcgacggagacaagattcttctgatgaac  22301900                                                                                      <---------ANAC58                                                                                      <---------ANAC46                                                                                      <---------ANAC58                                                                                    <---------ANAC46                                                                                   <------NtERF2                                                                                 <---------DEAR3(1)                                                                                 <---------ANAC46                                                                            <-------GAMYB                                                                            --------->ALFIN1                                                                           <---------MYB46(3)                                            <---------YAB1                <---------ANAC46                                          <------ZmHOX2a(1)            ------>ZmHOX2a(2)         <---                                          --------->YAB1              <------ZmHOX2a(2)     <--------                                          ====================================HOX2a_HOX2a--------->GLK1(2)              <-------MYC3                ===================================HOX2a_HOX2a --------->ARR14(2)              ------->MYC3    <---------ANAC58                 <---------ZAT2    <---------ANAC58<---             --------->ANAC55(2)        <---------TOE1(3)      <---------At4g35610 --------->ATERF1(1)        --------->ANAC58      <---------ANAC58                 --------->ZAT2    <---------ANAC58<---      --------->CCA1(2)     --------->ARR11(3)       <---------MYB46(3)<---------DEAR3(1)<---------ARR14(2) -----LBD16 <-----------------------TaNAC69(2)  <-------TEIL   --------->At4g35610<-----------HVH21 ->TEIL --------->ANAC58    <---------AHL20(2) <<<<<<<<<<<<<<<<<LFY  --------->ARR14(2)<----------DOF2 ------>LBD16<---------ANAC55(1)        <---------TOE2(3)   <---------At4g35610  --------->bZIP60(1)   cggagaagataagaaacgtgttttgtctaatttcttgcgattaaggatgatacattggttgaagcagctgcgatcggcgtttggcgtcgcgtttctgtgg  22302000                                                                                            ---------                                                                                          --------->At4g35610                                                                                          <---------At4g35610                      <---------TOE2(2)                                                --------->WRKY38(1)     ---------->ID1  <-----------RAV1(2)     <---------MYB52(1)                       <----------CDC5 <---------MYB52(1)  ============================RAV                                <---------ANAC46 ------ANAC58   <---------ZAT14             <----------DOF2                   --------->GLK1(2) ---RAV1(1) <-----------GT1               <---------ANAC46                   --------->ARR14(2) ------ANAC46   <---------ZAT18      <---------MYB46(3)                      <---------ARR14(2) ------ANAC58   --------->ZAT14      <-----------RAV1(1)     <-------TEIL    <---------GLK1(2)   ctcgtttgtctcatttacttcactcaggtttgttttggattgttgcctttagtttttggcaaattcatatgaaaatggcgattctcgcgttgagccgaaa  22302100                       <---------ANAC58                                       --------->ANAC46                       <---------ANAC46                                       --------->ANAC58                       <---------ANAC58                            <---------ANAC58                       --------->ANAC55(2)                         <---------ANAC58          <---------WOX13(1)--------->ATHB12                      ---------->ID1                  <--        --------->ATHB12--------->LBD16       --------->ANAC58 <---------MYB52(1)             <------        <---------MYB46(3) <---------YAB1     --------->ANAC58<-------GAMYB   --------->ANAC58<------       <---------YAB1 <---------LBD16 <---------At4g35610 <-----------GT1   <-----------GT1   <------ >RAP2.6(2)  <---------GLK1(2)  --------->ATHB12    <---------AHL20(2)  <---------YAB1--------->YAB1   cacaaaatggtgattgattctcgttgcggattattgattaagcagagaacgcattttttttttccgttgtcgttctaattacgctatatcgtaatctcgt  22302200                                                                                                 <---                                              <---------AHL20(2)                              <------     ----------->GT1                         <---------AHL20(2)               <---------ANAC46<------ -------CCA1(2) --------->ARR14(2)    <---------ARR11(3)                 <---------ICU4       <------ ---ANAC46      <---------ARR14(2)    --------->ARR11(3)              <---------ICU4  ------>ZmHOX2a(1) ---ANAC58   <---------TOE2(3)--------->ARR11(3)                  ===========================HOX2a_HOX2a ---ANAC58--------->ICU4    <---------YAB1   --------->AHL20(2)   <------ZmHOX2a(2)   ===============   gtatcaaatgtaattagggattcgaaacttatgattttgagatgtttttaaatttgaaacgttactggatcaaaattatcgcgttttcctctgttttcgt  22302300  Previous    Next  AGI:  At5g54855.1    Description:  pollen Ole e 1 allergen and extensin family protein. similar to unknown [Populus trichocarpa] (GB:ABK92603.1); contains InterPro domain Pollen Ole e 1 allergen and extensin (InterPro:IPR006041) Range:  from: 22299993    to: 22301613    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g54860.1    Description:  integral membrane transporter family protein. similar to integral membrane transporter family protein [Arabidopsis thaliana] (TAIR:AT1G64890.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38987.1); contains InterPro domain Biopterin transport-related protein BT1; (InterPro:IPR004324); contains InterPro domain MFS general substrate transporter (InterPro:IPR016196) Range:  from: 22301807    to: 22304432    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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