Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     <---------ANAC55(2)                                                  <-------TEIL      <---------AHL20(2)                      --------->TOE2(2)       --------------->AtSPL3--------->AHL20(2)             <---------AHL20(2)               <---------TOE1(3)    --------->ICU4             --------->AHL20(1)               <---------TOE2(3)--------->At5g28300        --------->AHL20(1)              --------->AHL20(2)    ----------->GT1        <---------AHL20(2)              <---------AHL20(2)--------->ANAC46        --------->AHL20(2)   <------ZmHOX2a(1)<---------------AtSPL8<---------ICU4         <---------ICU4 -------->TOE2(3)     --------->TOE1(2)<---------MYB52(1) --------->ANAC58           --------->GLK1(2) -------->TOE1(3)--------->AHL20(2)   <-------GAMYB--------->ANAC55(2)            --------->ANAC58 --------GT1 --------->AHL20(2)      ----------->GT1      --------->ANAC58        --------->ANAC58   taccttcaaataaaataaaataaacatatgaggattagtcagttaattaaggtacataacaagacagtaattaatacttagcacaagaatccatacttac  22295200                                                                                          --------->ANAC46                                                         --------->ARR14(2)               --------->LBD16                                                         <---------ARR14(2)              <---------HSFB2a(2)                                                        ------>MYB46(1)                  --------->HSFB2a(2)                                                        ------>MYB83           ------>MYB46(1)                                                    -------->P                 ------>MYB83 <--------                                                   --------->MYB52(1)        --------->AtMYB61      <                                                 <---------MYB52(2)          <---------MYB59---------                                          ------>ZmHOX2a(2)    --------->ARR14(2)       <---------LBD16                                        --------->ARR11(3)     <---------ARR14(2)      --------->MYB52(1) ---------->DOF2          ------->GAMYB <---------ARR11(3)     --------->GLK1(2) --------->HSFB2a(1)<   tacaaaagtagtcttccctgtttgacaatcgcctaataaactgatcttgagactaaccaaatccgaatccgaacttgaaccaaaccttctaccggaaaca  22295300                                          <---------LBD16                                  --------->GLK1(1)   <---------ARR11(3)                                  <---------GLK1(1)   --------->ARR11(3)        <---------ANAC58     ---------->DOF2  --------->ALFIN1        <---------ANAC46  --------->LBD16 <------NtERF2                     ---------->DOF2        <---------ANAC58  <-----------HVH21<---------DEAR3(1)            --------->LBD16     --------------------->WRI1  <---------ARR11(3)  <---------GLK1(1)  --------->ATERF1(2)     <-----------RAV1(1) --------->ANAC46 --------->LBD16               <---------ATERF1(2) -ARR14(2)           --------->ATERF1(1)--------->DEAR3(1)        <---------GLK1(2) ------MYB83  --------->ARR14(2) --------->ARR11(3)  --------->GLK1(1) <---------LBD16              < >ARR14(2) <---------TOE1(2)<---------WRKY12 --------->At5g28300  --------->ARR14(2)             <--- ------MYB46(1)     <---------ATERF1(1) <---------LBD16           <---------ARR14(2)           ------   gtaggttctgtcgtagtatcgtcgtctccgtcaaagatatcgcccgcggtggaagaaatcttgtgaacgattcgccggtaaagaataggtttttcgatga  22295400                                                                                          --------->ZAT18                                                                                        <-------MYC3                                                                                        ------->MYC3                                                                                       ==============                                                                                       <---------O2                                                                                       <---------TGA1a                                                                                       --------->O2 <       --------->ANAC46                            <------ZmHOX2a(2)                   --------->TGA1a       --------->ANAC58                       ---------->DOF2                          <---------ANAC55(2)       --------->ANAC58                --------->GLK1(1)                               <---------ANAC46 ---------------AGL15                  <---------GLK1(1)          <---------YAB1       ============== ------YAB1                     --------->TOE2(3) --------->ARR11(3)   <-----------GT1 --------->ANAC46 --->YAB1         <-----------GT1 ---------->DOF2 <---------ARR11(3)<---------GLK1(2)  --------->ANAC55(2)   tacttgaacaagaaacaatttttctccatagaaacctaaagaaatctccaaagatcgataccctctcgatgattctccattttctgttcacgtgaactat  22295500              <XXXXXXXXXXXXXXXXXXXXMIR391       ---------->DOF2  ------>NtERF2  --------->LBD16 --------->ANAC46 <---------LBD16   <----------DOF2 <---------ATERF1(2) --------->HSFB2a(2)    ------>NtERF2                                           <----------DOF2 <---------HSFB2a(2)    --------->LBD16                                        ------>ZmHOX2a(2)    < --------->ATERF1(2)   <---------LBD16                                       <---------ARR11(3)------ <---------RAP2.6(2)  <---------LBD16  <----------DOF2                       --------->ARR11(3)------ =================bZIP_DOF    ------>ZmHOX2a(2)                          <---------ANAC55(2)  ------- ---------LBD16  <---------YAB1      ------->TEIL   --------->YAB1       --------->ANAC55(2)  ------- =================bZIP_DOF   <------ZmHOX2a(2)------>NtERF2       ---------->DOF2         --------->YAB1   tttccggcagaaaggagttatctttccggcgatctcatggactttctcggccattgatgaaacagagagaaagttatgtgatcttttggcattcacaagc  22295600                                                                                     --------->MYB46(3)                                                                                 --------->WRKY38(1)                                                                                 ----------->HVH21                                                                               --------->At4g35610                                                                               <---------At4g35610                                                                               <-------GAMYB                                                                              --------->MYB111(1)                                                                              --------->MYB111(2)                                                                              --------->MYB55(2)                                                                              --------->MYB52(2)                                                                              <---------MYB46(3)                                                                           <------MYB46(1)                                                                           <------MYB83       <----------DOF2                                                    <---------AtMYB61 ---------CCA1(2)                                                        <---------WOX13(1) --->ZAT2           <----------DOF2                                     <------------CBF --->At4g35610 <----------DOF2                   *TSS            <-----------TBP --------->WRKY12 -->ANAC58    <---------DAG2           <-----------GT1       ----------->GT1 <--------P -->ANAC58 <-----------GT1       <----------DOF2 <---------WOX13(1)    --------->ATHB12<-----------HVH21   tcacatcttctttttgcctttccttttatgtttttcttttgttactggctaattggtagtaatcggtttatatggattggtagttgacccgtcgtcttag  22295700                                                                        <---------HSFB2a(2)                                                                --------->ALFIN1                                                              <---------ANAC58                                        <------------------------ANAC81 <---------TOE2(3)                                   <----------DOF2            <---------ANAC58          <-----------GT1<---------ANAC58                     --------->ANAC55(2)  <---------ARR11(3)     <---------ANAC46                     <---------ANAC46        ----------->GT1  --------->ARR11(3)     <---------ANAC55(2)           <---------ARR11(3)     ----------->GT1 --------->RVE1(1)       <---------ANAC55(1)           --------->ARR11(3)    ----------->GT1 --------->CCA1(1)       <---------ANAC58           <-----------GT1     --------->HSFB2a(2)         -   aaaatatctatattacccctagttgatgcgtgtgttccttttggtttttagttttaagctcttcgcgtgttgttatggaagggtaatatagtcaatttag  22295800                                                --------->At4g35610                                                <---------At4g35610            <---------AtLEC2              <-----------HVH21        <----------DOF2                <---------ANAC58      <---------YAB1                   --------->ANAC55(2)     <-----------GT1                   <---------ANAC58                        <----------DOF2     <---------ARR11(3)           <---------------AtSPL3                     <---------At4g35610     --------->ARR11(3)        ---------->DOF2  --------->ZAT14       <---------WOX13(1)    --------->YAB1    ----------->GT1  <---------ANAC55(2)           >>>>>>>>>ARR2     <----------DOF2 -------->ICU4      --------->ZAT14   ------->TEIL<---------ZAT18  <---------YAB1   ---------->ID1   aactaattatctttccatgaagtatagtaaacccaaagtgtacgtgtcactgctcactagttatatcatttgattgttcagcttttgttcttttgtcaac  22295900                                  <---------ANAC58                                                  <                                  <---------ANAC58                                                <--                             --------->YAB1                                                      ----                           <---------WOX13(1)                                    <---------ANAC46<---                         --------->ATHB12                                 <---------ANAC58     ------                        <---------YAB1                                    <---------ANAC58     ------                  <---------AHL20(2)                              --------->AHL20(2)           <-----                 <---------AHL20(2)                   <---------YAB1  <---------AHL20(2)      <------     --------->KAN4(2)--------->YAB1               ---------->ID1<---------AHL20(2)     ---------->DOF2   <---------YAB1--------->AHL20(2)       ------>ZmHOX2a(1)      <---------YAB1----------->GT1-------   atttgattattcgtctaaatttaatcttcattgatagcgttctcctatagtttgttcttatttgaatattatttattcgtgttgtttataaaaagaatga  22296000       ------>ZmHOX2a(1)                                                    ------>ZmHOX2a(1) ---------YAB1                                                       <---------AHL20(2) -------ICU4                                                         <---------YAB1 ----->ICU4                                                       <---------AHL20(1) ------YAB1                  --------->KAN4(2)                    --------->ARR11(3) --->YAB1                   <---------ICU4                        <---------ARR11(3) --->ATHB12                 <---------KAN4(1)                     --------->AHL20(2) ----ICU4                  <---------YAB1                         --------->AHL20(1)             <--- ---YAB1           <---------YAB1 ------>ZmHOX2a(1)    >>>>>>>>>>WRKY63    --------->TOE2(3)   ------ -->ICU4         ----------->GT1 --------->TOE2(3) ------->TEIL   <---------AHL20(2)         <-------   ttattgttcctacaatgtattgtgatttgattattccttagtatttcaatatgaatttgactatgtaatatattattccttagtactgagaaatgaatga  22296100  Previous    Next  AGI:  At5g54840.1    Description:  GTP-binding family protein. similar to GTP binding [Arabidopsis thaliana] (TAIR:AT3G21700.3); similar to hypothetical protein [Vitis vinifera] (GB:CAN60928.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39429.1); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain Small GTPase, Tem1 (InterPro:IPR017231); contains InterPro domain Miro-like; (InterPro:IPR013684) Range:  from: 22293739    to: 22295649    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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