Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          --------->YAB1                                                        --------->AHL20(2)                                                     --------->WOX13(1)                                                  --------->ANAC58                                                  --------->ANAC58                                              --------->ZAT6                                    -----                                 <-----------------AGL1 <---------AHL20(2)       --------->TOE2(3)                       <---------MYB52(1)   ----------->RAV1(1)       <----------DOF2          ------   tcatcaattctcttgtttatgctcccttgtttttttttttttttggcaacactagcaattatataggtctaacttttgttaagcctcaaacttcattcct  22289900                                                             <---------ICU4                                                             --------->ATHB12                                                             --------->ATHB51                                                            --------->ICU4                                <<<<<<<<<<<<<<<<<LFY        <---------YAB1       <-----------GT1      <---------AHL20(2)            --------->YAB1    <---------ICU4          --------->AHL20(2)            <---------ICU4                            -  --------->ARR11(3)        --------->YAB1               <---------ATHB12                  --------->AHL20(2)  <---------ARR11(3)     --------->YAB1            <---------YAB1                       --------->AHL20(1) --------->YAB1        --------->AHL20(1)        --------->YAB1                         <---------AHL20(1) ->ZmHOX2a(1)          --------->AHL20(2)      --------->ARR11(3)                      --------->AHL20(2) --->TOE2(3)          --------->YAB1  ----------->GT1    --------->ICU4 --------->AHL20(2) <---------AHL20(2)   aaatgatatttacaatttagcaaaaaataataatatacagtggtatatatatcatgaaaatcattattgaaaaatgaaataaaactaaaatatataaata  22290000                                    <----------ID1   <-----------HVH21                                  ---------->DOF2   <-----------RAV1(1)        <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                 --------->AHL20(2) --------->ALFIN1          <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                       ------------------------>ANAC81      ---------->DOF2   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                   --------->AHL20(2)         --------->WOX13(1)     --------->MYB52(1)          ----------->GT1 <----------ID1  ----------->GT1 <----------DOF2  <------------------------ANAC81 -------->MYB52(1) <---------AHL20(2)   ---------->DOF2<---------ANAC46<------------MYB.PH3(1) ------   caaaacgaagactggttttaaaaaaatgggaacaaataaagacaaagtaaatcagtgtcgcttaaagaagttaactgttttttttttttttttttttttg  22290100                                                                                    --------->YAB1                                                                                    --------->TOE2(3)                                                                                    <---------------AGL15                                                                                    --------------->AGL15                                                                             <---------AHL20(2)                                                                             --------->AHL20(2)                                                              <---------AHL20(2)   ----------------->AGL3                             --------->AHL20(2)              --------->AHL20(2)    <---------YAB1                   --------->YAB1                            <---------AHL20(1)    ----------------->AGL1                  ----------->GT1                            <---------AHL20(2)  <-----------GT1 ----                 <---------WOX13(1)                  <-----------GT1      ----------->GT1       -----            <-------TEIL  ----------->GT1          <---------MYB52(2)<---------ANAC58           <----       <---------WOX13(1) --------->YAB1          --------->ANAC58   <---------ANAC46     ----------- ----->GT1 --------->CCA1(2) <---------AHL20(2)   --------->ANAC58   <---------ANAC58  --------->ATHB51   taaaaactgatagatacagattgataaatgataaatttgctataacatatgtaagtaacccaattttttttgtgtgtgttaaattaccataatttgtact  22290200                                   --------->YAB1                               <---------AHL20(2)                      --------->TOE1(3)                         --------->AHL20(2)                            --------->TOE2(3)                        <---------YAB1                                 --------->YAB1                      --------->YAB1         ---------->DOF2         --------->ARR11(3)                      <---------ICU4     <----------DOF2             <---------ARR11(3)                     <---------YAB1<---------ICU4                   <---------CCA1(2) ----->ANAC46      <---------ICU4  --------->ATHB12               --------->AHL20(2) ---->HSFB2a(2)    --------->YAB1 --------->ICU4                 --------->AHL20(2) -----HSFB2a(2)   --------->ICU4  <---------ATHB12          ------------>CBF  --------->YAB1 ---->AtSPL8    --------->YAB1--------->AHL20(2)    --------->YAB1<---------AHL20(2)            *TSS   cgaaatagttcaacaaaataatcatcataatataaaatcattacttttaaagaatcacattagtcaatttaaatcttaactcataagcgaaaatcacatt  22290300                                                                     <----------DOF2                                                                    ------>ZmHOX2a(2)                                                                    ================================HOX2a_HOX2a                                                                   =================================HOX2a_HOX2a                                                                   <------ZmHOX2a(2)                                                                  ------->TEIL                                                                  --------->ARR11(3)                                                                  <---------ARR14(2)                                                                  --------->ARR14(2)                                                                  <-----------ARR10             <----                                                                 <---------CCA1(2)              -----                                                               <---------ANAC55(2)             <-----                                                               --------->ANAC58               <------                                                               --------->ANAC58               <------                                --------->ANAC58               --------->ANAC46               -------                                --------->ANAC46              <---------LBD16                ========                                --------->ANAC58           --------->ANAC58                  <------ZmHOX2a(1)                      --------->YAB1                       --------->ANAC58     --------->TOE1(3)       <---------TOE2(3)      --------->MYB52(1)         ---------->DOF2        --------->TOE2(3)   <      ---------->DOF2<---------YAB1             <---------WOX13(1)<---------ARR11(3)         ========   cgcgagattaaagttttctagttatcagaaaaaaacgaaacctttctcagattgaaatcgaaagcacggatctttcttcatacctcaaacctgcaggatc  22290400              <---------AGP1              <---------ARR14(2)                                                  <<<<<<<<<<MYB80              --------->AGP1                                                     <------MYB46(1)   --------->ICU4          <-----------ARR10                                     <---------MYB46(3)   <---------YAB1         <---------CCA1(2)                                      <------MYB83 --------->YAB1<------ZmHOX2a(2)                                                <---------TOE2(2) ---TEIL      <---------ARR14(3)                                               <---------MYB52(1) ->ZmHOX2a(2) --------->ARR14(2)               <---------ALFIN1               ------->MYC3 -ZmHOX2a(2)  --------->ARR11(3)<---------TOE1(3)                             <-------MYC3 ---ARR14(2)  <---------ARR11(3)<---------TOE1(2)                            <---------O2 <---------ARR11(3) ---ARR11(3) <---------GLK1(1)  <---------TOE2(2)                            --------->TGA1a -->ARR14(2) --------->GLK1(1) <-----------RAV1(2)                         <---------ALFIN1 ======================HOX2a_HOX2a      <---------AHL20(2)                <---------ZAT18 --------->GLK1(2) ---------ATHB12------>ZmHOX2a(2)      --------->AHL20(2) <---------AHL20(2) <---------TGA1a =====================HOX2a_HOX2a----------->GT1          --------->AHL20(2) --------->O2 --------->ARR11(3)   cattcatgattttggagatctgtttatcaaatctcaggttattaaatctccacttctcgtttaattctgttcttagcccacgttggtttaaaaatctaga  22290500                                                                                 ----------->GT1                                                                                 <------MYB83                                                                                 <------MYB46(1)                                                                                <---------AtMYB61                                                                         ------>ZmHOX2a(2)                                                                        --------->CCA1(2)                                                                        <------ZmHOX2a(2)                                                                       <---------ARR11(3)                                                                       <---------ARR14(3)                                                                       --------->ARR14(3)                                     --------->HSFB2a(1)               <-----------ARR10                                     <---------HSFB2a(1)               --------->AGP1                                     <---------HSFC1(2)                <---------AGP1                                     --------->HSFC1(2)                <---------ARR14(2)                             --------->At4g35610                       --------->ARR14(2)                             <---------At4g35610                      <---------CCA1(2)     ------>ZmHOX2a(2)  <---------GLK1(1)                   <---------ANAC46    --------->MYB59 <---------YAB1  <---------YAB1<------ZmHOX2a(2)     --------->AHL20(2)--------->ARR11(3)   gttttgatcgcaatttgtgatttttgatttcagatcagaagcttctacgagttgattatatgctgtgtttgcagatctgggtttggttatatttctgagt  22290600                  <-------MYC3                  ------->MYC3        <----------DOF2            <---------ALFIN1       <---------ARR11(3)          ------>MYB83             <---------ARR14(2)          ------>MYB46(1)          --------->ARR14(2)          ----------->RAV1(1)      <---------ARR11(1)        <---------ANAC58         --------->ANAC46         <---------CCA1(2)          <---------ANAC58        --------->MYB46(3)        <---------ARR14(1)         <------MYB46(1)        <---------MYB55(2)        ------>MYB46(1)            <------MYB83       --------->ANAC58           ------>MYB83          <---------MYB46(3)       --------->ANAC46         <---------MYB59      <-----------RAV1(1)       --------->ANAC58   ---------->DOF2          <---------ANAC46         <----------DOF2   aaatctctcacccaacaccatgtgtgatcaaagaccaaatcttttagggtctctcgtgttgttgggtttcttcatcttctttgtaaatggagaagaatgc  22290700                                                              <---------ANAC46                                                        <-------TEIL                                                     <---------At4g35610                                                     --------->ZAT2                                                     --------->At4g35610--------->ZAT14                                                --------->REM1(1)      <-----------RAV1(1)    <------                <---------WOX13(1)            ----------->RAV1(1)   <-----------GT1 <---------MYB46(3)              --------->ATHB12          <---------REM1(1)<---------ANAC58          <---------WOX13(1)            <---------WOX13(1)         --------->ARR11(3)<---------ANAC58        --------->ATHB12<---       <---------At4g35610             <---------ARR11(3)<---------ANAC46       <---------YAB1<------   tctaattcgagctcattgattgggcatgagtctgagttcaagatgttgcaacatcagcttcgtggggttttcactgttgtcgatgattgttcgtttaggg  22290800  Previous    Next  AGI:  At5g54830.1    Description:  DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO44275.1); similar to hypothetical protein OsI_023125 [Oryza sativa (indica cultivar-group)] (GB:EAZ01893.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN79804.1); contains InterPro domain Cytochrome b561 / ferric reductase transmembrane (InterPro:IPR006593); contains InterPro domain DOMON; (InterPro:IPR013050); contains InterPro domain DOMON related (InterPro:IPR005018) Range:  from: 22290296    to: 22293527    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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