Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              --------->O2                                            <---------O2                                            --------->TGA1a                                            <---------TGA1a                                    <---------bZIP60(2)                       --------->ATHB51 ------>NtERF2                                               -                       <---------AHL20(2)--------->ZAT18             --------->ARR11(3)             -                   <------ZmHOX2a(1)<---------TGA1a                  <---------ARR11(3)----------->HVH21               --------->TOE1(2)    <---------O2             --------->ZAT6            ----------->TGA1         --------->AtMYB61 <---------YAB1<---------ZAT18   ------>MYB46(1)           <---------ANAC58 ----->DOF2    --------->TOE2(2) ----------->TGA1          ------>MYB83------>ZmHOX2a(2)     <------- >GT1  >>>>>>>>>>MYB80--------->ICU4--------->O2         <---------MYB59             <---------ANAC58   aagtaatcaaaccaaaacataggaataatttgatagtgacgaggccacttgagtctgaaccaaacactatcgatcttcgaagataagtcgtgacgatgtg  22286700                                           <-----------GT1                                         <---------AHL20(2)                                     --------->AHL20(2)                                     --------->YAB1           ------>MYB83                                     <---------AHL20(2)       ------>MYB46(1)                                 --------------->AGL15      --------->AtMYB61                                ----------------->AGL3      ------->GAMYB   --------->GLK1(1)          <-----------GT1               <---------MYB59 -------->ANAC58           <---------ARR11(3)              --------->MYB46(3)            <---------MYB52(1) -------->ANAC58           --------->ARR11(3)             -------->P                 <---------At5g28300 --bZIP60(2)               <---------GLK1(2)             --------->WOX13(1)    <-------TEIL   gcaagaaatctataagatgagagttcaaagattttccatttatattatcgattttgtatcaaccaaacttatgtgtctggattcatttacagttgtttct  22286800                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                          ----------->RAV1(1)       -                                                                         --------->ANAC58           <                                                                        --------->SPL7              <                              ------>ZmHOX2a(1)                       <---------SPL7                -                              <----------DOF2                       <---------------AtSPL8        <--                     --------->GLK1(2)                           --------->ATHB12      -------------- <-----------HVH21  <---------GLK1(2)    <---------ZAT14 --------->ANAC46--------->ANAC58    <-------   gactgtcaaatactaacttatagattcttatcctttttttgagtaaactttctatgttcacgctgattcagtggtacgacatatgtggaagtttttttca  22286900 ---------TGA1a -------->ANAC55(1) -------->ANAC55(2)                                              ---------->DOF2 -------->TGA1a                                             <----------DOF2 -------->ANAC46                                           --------->HSFC1(2) -------->ANAC58                                           <---------HSFC1(2) -------->ANAC58                                           --------->HSFB2a(1)                 <----- ---------ANAC55(2)----------->GT1                         <---------HSFB2a(1)        <---------TOE2(3) ---------O2    <---------ANAC58                          ------->TEIL               <-----------GT1 -------->O2--------->DOF5.7(2)                        --------->ANAC58              <---------DOF5.7(2) -------ALFIN1  <---------ANAC58                       --------->ANAC58              --------->MYB52(1) --------->TaNAC69(2)                              --------->ARR11(3)           <------ZmHOX2a(1) ----GT1    <---------MYB52(1)                    --------->RVE1(1)  --------->AHL20(2)   <---------GLK1(1)   acacgtctctctccgtttacttggttacaaaacttccatatcaaaaccaaaaatatcacgaactttctaaagaaaatatagaggaattaacgatttctgt  22287000                           ------------>CBF         <------------CBF <-----------GT1        --------->ATHB12  --------->YAB1                                      ------------>CBF     --------->ANAC46 <---------AHL20(2)                            <---------ALFIN1  <-------TEIL       <---------AHL20(2)                            --------->ZAT14                --- <-----------HVH21   --------->AHL20(2)                           <---------ALFIN1                --- ------HVH21   <------ZmHOX2a(2)                  <----------DOF2--------->ANAC46                 ---   cacgttcacaccattggatcaaattaaatcacaattcacaaacacatctcttctttcgaaactcatcaccacacttctgtttcaatggattcaattcaac  22287100                                                          ---------->DOF2                                                          <---------DOF5.7(2)                                                       <-------GAMYB                                                       <---------RAP2.6(3)                                                      <---------------AGL15                                                      --------------->AGL15                                                     <-----------------AGL2                                                     <-----------------AGL1                                                     ----------------->AGL1                                          <---------CCA1(2)                                  -------->HAHB4     ----------------->AG                                  <---------ICU4     <-----------------AG                    ------>NtERF2--------->ICU4      <-----------------AGL3                   --------->LBD16--------->YAB1 <---------ANAC58                   <---------ETT(1)   --------->ARR11(3)<---------MYB52(1)       --------->ARR11(3)        <---------ATHB51<---------ANAC58         >>>>>>>>>>>>>>>>>LFY    <---------GLK1(2)         <---------YAB1  <----------DOF2            <------ZmHOX2a(1) ------>ANAC58     --------->ANAC46 <---------YAB1   ----------------->AGL2     <---------ZAT18 ------>ANAC58    --------->HSFB2a(2) <---------ARR11(3)--------->DOF5.7(2)     <---------ZAT14 ------>ANAC46    <---------HSFB2a(2)--------->YAB1  ----------------->AGL3     --------->ZAT14------   aagacagattatctagtcttcccgacattcttctaattatgatcatctctttcttgccgttaaaggaatgtgtaaggaccagtgttctctccaagaggtg  22287200                                                <---------ANAC55(2)                                                --------->ANAC55(2)                                                <---------ANAC46                                                <---------ANAC55(1)                         <--------                                                <---------ANAC58                            <--------                                                <---------ANAC58      --------->At4g35610  <---------At4g35610                                          <---------YAB1    <---------bZIP60(1)        <---------REM1(1)                                        <---------At4g35610 --------->GLK1(1)--------->ARR14(2)                                       --------->GLK1(2)    --------->bZIP60(1)  <---------HSFB2a(2)         <---------ANAC46            <------ZmHOX2a(1)      <---------GLK1(1)<---------ARR14(2)         <---------AtLEC2          <---------TOE2(3) --------->ARR14(2)      --------->KAN4(2)        --------->ZAT2             <---------TOE1(3) <---------ARR14(2)     <---------KAN4(1)        <---------ZAT2        <----------DOF2  <-----------------------TaNAC69(2)--------->HSFB2a(2) --->ALFIN1         <---------MYB52(2)<---------GLK1(2)  ------>ZmHOX2a(1)  --------->KAN4(1)   gaggtatctctgcttggagaccacaaacctttcttttaaggaatctgattacgtgaatcctgatatcaccgatgctgaatattcgagaattgtagcttat  22287300                                                                                                =====                                                                                                <----                                                                                             <-------                                                                                             --------                                                                                            <--------                                                                                       <------MYB83                                                               --------->HSFB2a(2)     <------MYB46(1)                                                               <---------HSFB2a(2)    <---------MYB46(3)                                                          --------->HSFC1(2)         <---------ANAC46                                                          <---------HSFC1(2)         <--------P =====      <----------DOF2                                     <---------HSFB2a(1)       <---------MYB52(1) -ANAC58         ----------->GT1                       ---------->DOF2            <-----------RAV1(1) -ANAC58      <---------ANAC46                      <------NtERF2               ----------->RAV1(2)   cgttcattcttttgttctgtggataaatgggtctctataactcaacatcaagtcgtcgaaagcttcgagatttgtttctcccatctggtgggtttcgagg  22287400                                   <---------TGA1a   <------ZmHOX2a(2)               --------->TGA1a  <---------ARR11(3)               <---------O2                                       --------->YAB1  --------->ARR11(3)           <---------ALFIN1                                       ----------->GT1 =========HOX2a_HOX2a         <---------REM1(2)                                      --------->ICU4 --ZmHOX2a(1)         --------->ANAC46                                               <---------ATHB12 --HSFB2a(2)       --------->ARR14(2)                                           --------->ANAC58 ->HSFB2a(2)       <---------ARR14(2)   <---------ZAT14      <-----------HVH21  --------->ANAC58   -- -ANAC46        ------>ZmHOX2a(2)--------->ANAC46       --------->ATHB12    --------->HSFB2a(2)   <-- ======================HOX2a_HOX2a --------->O2     <---------MYB46(3)      <---------HSFB2a(2) -----   ataagatcgacgctctgatcgaatacgctgtctccacacgagtgaagaatttagttgttgatttgtcaaacccctcttggagaagcaatggtgatatatc  22287500                                                                     <---------ANAC58                                                                     <---------ANAC58                                                                     <---------ANAC46                                                                    <---------LBD16                                                --------->TOE2(3)  <-----------GT1        <---------AHL20(2)                      --------->TOE1(2)--------->CCA1(2)  <-----------TGA1                           ------->GAMYB      --------->ARR14(2)             <----- ------->ARR14(2)            <-----------------------TaNAC69(2) --------->ARR11(3)     ------>ZmHOX2a(1) -------CCA1(2)           ---------->DOF2   --------->MYB46(3)  <---------ARR14(2)    --------->TOE1(2) ---->YAB1       >>>>>>>>>EIN3              <---------MYB111(2) <---------ARR11(3)   ------>ZmHOX2a(2)   atatcgtcattttatgtatacattgcctaaaagcgtttacagtctaacaaccttggagtcactgaagatttacgggtgcaagtttgatccttcgaaattc  22287600  Previous    Next  AGI:  At5g54820.1    Description:  F-box family protein. Identical to Putative F-box/LRR-repeat protein At5g54820 [Arabidopsis Thaliana] (GB:Q9FFU7); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G56400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39496.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 22287085    to: 22289003    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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