Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  <----                                                                                                <----                                                                                          ------>ZmHOX2a(1)                                                                                        <---------HSFC1(2)                                      ------>NtERF2                                     ------>ZmHOX2a(2)                                     <---------RAP2.6(2)                                --------->HSFC1(2)                                    --------->RAP2.6(3)                                <------ZmHOX2a(2)     ==============================HOX2a_HOX2a                                        --------->ARR14(2)     <------ZmHOX2a(1)          --------->YAB1                                        --------->AGP1 ------------->AGL15            <---------ICU4                                        <---------ARR14(2) --------HSFB2a(2)             --------->ICU4                       ===========================HOX2a_HOX2a ------->HSFB2a(2)             <---------YAB1                       ==========================HOX2a_HOX2a --------------AGL15         --------->YAB1---------->DOF2   <---------ANAC58         --------->ARR11(3) -------------->AGL1        <------ZmHOX2a(2)                <---------ANAC58       --------->MYB59-- ---->P                    <---------ARR11(3)    --------->GLK1(2)  ------>ZmHOX2a(1) <---------ARR11(3) ----->MYB52(1)            --------->ARR11(3)   <---------GLK1(2)---------->ID1     ----------->ARR10   accagaaggagaagaggcagtgtcttcaagatcatgatgacggccaaaaggaatctctctatttcttgtcctcttgatgtccaaattagatccttcttgc  22272500                                                                            <---------WRKY12                                                                           --------->DOF5.7(2)                                                                          <-----------HVH21                                                                         <---------O2                                                                         <---------TGA1a                                                                         --------->TGA1a                                           <---------DEAR3(1)            --------->bZIP60(2)                                           <---------ANAC46              <---------bZIP60(1)                                         <-----------HVH21               --------->bZIP60(1)            --------->ARR14(2)          <---------ANAC58                 --------->O2            <---------ARR11(3)          <---------ANAC58                 ============================     <-------MYC3                       <---------ANAC46              ----------->HVH21     ------->MYC3                   <---------At4g35610               --------->DEAR3(1)     <-------    <---------O2            --------->ANAC58                    --------->GLK1(1)            --------  <---------ALFIN1          --------->ANAC58 <------NtERF2      <---------GLK1(1)            <------- -----ANAC58--------->ARR11(3)  ----------->HVH21          --------->At4g35610      <---------ANAC58 -----ANAC58<---------ARR14(2)  ----------->TGA1           <---------At4g35610    <---------YAB1 --------->HVH21       <---------ZAT18 ------>NtERF2  <------ZmHOX2a(1)------>NtERF2<---------ANAC58   ttcgacacgttgagggtcttcttagtggccacgaatgacgctgcgtcggagacagaggaagagctgaaatctccgacgtcaactatgcttgaagaagcct  22272600          ---------->DOF2        ------>ZmHOX2a(1)       --------->TOE2(3)    --------->ARR14(2)   --------->GLK1(1)                 <---------HSFB2a(2)                          <---------ICU4   <---------GLK1(1)                 --------->HSFB2a(2)                         --------->ICU4 ====================bZIP_DOF       <---------LBD16                            --------->YAB1 --HSFB2a(1)             <---------At4g35610                           <---------YAB1 ->HSFC1(2)              <---------ZAT2     <---------AtMYB61     <---------MYB52(1) --HSFC1(2)    <-------TEIL   <----------DOF2             <---------ICU4    <---------At4g35610  ----   cgaagaaatcctcaaagtacatcgtccagctactttcttctggattttggtcgtctgtaaacatggccgtttcatgtttgctcataatgaaggcattgtt  22272700                                                           <------MYB83                                                           <------MYB46(1)                                                           <---------MYB46(3)                                                          <---------AtMYB61                    <-----                                                         <--------P                --------->At4g35610                                                        <---------ANAC58           <---------At4g35610                                                        <---------ANAC58         <-----------RAV1(2)                                                        <-------GAMYB           <------NtERF2  <-----                                                       --------->MYB55(2)       <---------At4g35610                                                       <------MYB83             <---------ZAT2 <-----                                                       --------->MYB52(2)       --------->At4g35610                                                       <------MYB46(1)         ----------->RAV1(1)                                                       <---------MYB46(3)     <-----------RAV1(2)----                                                       --------->ATHB12      <------NtERF2    <------           --------->AtLEC2        ---------->DOF2    <---------AtMYB61  <------MYB46(1)    --------- ----->ATHB12                  ---------->DOF2     <-----------RAV1(1)   <------MYB83       ---------   cattgaactctccatgaaaactttgtaagagaaaaaagaaagagagttgttttttgttggttggtttgtgtaatttggtggcagcagatgaaaacatgcg  22272800                                                                                                <----                             --------->AHL20(2)             --------->AHL20(2)                <------        --------->AHL20(2)  --------->AHL20(2)              <---------AHL20(1)                ------- ----ANAC58             --------->AHL20(2)             <---------YAB1                         <------ ----ANAC58         <---------ZAT14          <---------MYB59<---------AHL20(2)           *TSS ------- ----ANAC46 --------->AHL20(2)   --------->YAB1------>MYB83 --------->AHL20(1)       <---------At4g35610 ----->ALFIN1       --------->ZAT14 --------->YAB1   <---------ZAT6         <-----------GT1  <------- -TEIL <---------YAB1 ----------->GT1     <-----------GT1--------->YAB1     --------->ZAT6   -------- >TOE1(2)   <---------AHL20(2)  <---------AHL20(2)  <---------YAB1        --------->YAB1 ------------ >TOE2(2)<---------AHL20(2) <---------AHL20(2) ------>MYB46(1)         <----------DOF2  <-----------HVH21   tgagggtttattatatatatagtgaagtaaataaataatcaaattaaccaaattagtattaataaattgttctctttaatactattttgctgtcaatgat  22272900                                                                        ---------->DOF2                                                                <--------P                                                               <-------GAMYB                                                              <------MYB83                                                              <---------MYB46(3)                                                              <------MYB46(1) -----ANAC46                                          <-----------------AGL3 ------ATHB5                                          <-----------------AGL1   <---------ANAC46 -->ATHB12         <---------GLK1(2)          <-----------RAV1(1) <------MYB83 <-------GAMYB --ATHB1    <---------MYB46(3)          <----------DOF2<---------------AGL15  <------MYB46(1) -->YAB1    <------MYB83            --------->ATERF1(1)--------------->AGL15  <------MYB83 --ATHB12   <------MYB46(1)       <---------PCF2      <-----------------AG    <---------MYB46(3) ->ICU4 <-----------RAV1(1)  <---------MYB46(3)       <-----------------AGL2  --------->MYB55(2) >CBF   --------->ICU4       --------->MYB52(2) <---------MYB52(1)<------MYB46(1)   ggggaatgtaatgttggtttggaatcttggtttgtggggtcgctctatctgttgtttctctatttggttggaataaaagttggttgaaatgttcaaacca  22273000                                                                                                    <                                                                       <------MYB46(1)              -                                                                       <------MYB83                --                                                        --------->AHL20(2)                         <-                ------>ZmHOX2a(1)          <---------AHL20(2)      <---------ZAT2             -------                --------->AtLEC2 --------->ICU4      --------->YAB1--------->ZAT2        <---------YAB1          <---------MYB52(1) --------->TOE2(3)    <---------AHL20(2)XXXXXXXXXXXXXXXXXXXX>MIR778 <----        <---------ZAT6 --------->AHL20(2) --------->AHL20(2) --------->TOE1(2)      <----------DOF2--   gttcaatatactgttatcctgcaaattaaaacataaatatgaaattttatattaaaaataaaacattcgagcttggtttatgaacacttttatgaatagt  22273100         ----------->GT1       <---------ANAC58       <---------ANAC58     <---------YAB1   <---------AHL20(2)   <---------ICU4   -------->HAHB4  <---------ATHB51  <---------YAB1  --------->ICU4 ---------ICU4                                                                                     -- -------->YAB1                                                                                     <- ------->AHL20(2)            <---------ANAC58                                               --------- --------AHL20(2)            <---------ANAC58                                           --------->ATHB12 ---->GT1<---------ZAT6      ----------->GT1                                    --------->ICU4     -- -----ZAT6   --------->AHL20(2)           --------->DAG2                     --------->AHL20(2) ----- ------->ICU4<---------AHL20(2)          ---------->DOF2      <---------DOF5.7(2)  <---------YAB1  <-   attaattattcgtgttaaattatctaaaatgtcgtaacatgaataaagtagaatattgttttgtaaacggtctgaagtataaattatgaatgagtagtta  22273200                                                         <---------ARR14(2)                                                     --------->ZAT6    --------->HSFB2a(2)                                                    <---------At5g28300<---------HSFB2a(2)     <---------TOE2(3)                        <--------HAHB4      --------->ATHB51 ------->AHL20(2)                             <---------ICU4      -------->ATHB1 --------AHL20(1)                       <---------WOX13(1)       <---------ATHB12 -->GT1      <---------TOE2(3)        --------->ATHB12   --------->ARR14(2) ------->AHL20(1)                    <---------YAB1<-----------GT1<---------ICU4 ---->AHL20(2)           <---------ANAC46     --------->YAB1     --------->ICU4           <---------- --------AHL20(2)        <---------REM1(1)   <---------ATHB12    <---------ATHB51        <-----------GT1   aaatattaagaaattaagaaaaacatgatgtagaactatatgattgaatcattttacagtatatgcaattattccagatagttttttttttttaacttgc  22273300                         <---------ARR11(3)                         --------->ARR11(3)                        <---------CCA1(2)                      <---------AHL20(2)              <---------AHL20(2)                      --------->AHL20(2)            <---------ANAC55(2)                 <----------DOF2             <<<<<<<<<<WRKY63                                 <------                 <---------DAG2       --------->MYB46(3)                ----------->GT1    <--------- -GT1      ----------->GT1  <----------DOF2----------->GT1       <-----------GT1 <-----------GT1   agttatagagacatggttacttttttaaatctttttttcaacaaatagtcaaatatgtaaatgttattcacagactgtatatttgactgtatataacata  22273400  Previous    Next  AGI:  At5g54790.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G50930.1) Range:  from: 22271212    to: 22272889    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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