Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  --------->DEAR3(1)                             --------->DEAR3(1)                             --------->AtMYB61                             <---------ALFIN1                       ------>ZmHOX2a(2)                      <------ZmHOX2a(2)                     <---------ARR14(2)                     --------->ARR14(2)                     --------->ARR14(3)                     <---------ARR11(3)                     <-----------ARR10                     --------->ARR11(3)         <------ZmHOX2a(2)                                 <--           ---------->DOF2  --------->MYB46(3) <---------ARR11(3)                   ---------->DOF2 - ---------->ID1      <---------ARR14(3)        --------->AGP1               --------->YAB1<---------- --->RAV1(1)       ----------->ARR10          --------->At4g35610           --------->TOE2(3)   -----   tttggctctcttgaaaaggagaagatcttcaccaccgagtcttgagccagatcaatatcgctcacagaagaacaacaacgataaatcaaagaagcattaa  22258300      --------->AtMYB61     --------->MYB46(3)     <---------MYB55(2)    ------->TEIL                                        ------->PIF5 --------ID1                                       --------->ALFIN1      ------>MYB46(1) -------------->AtSPL3                         --------->LBD16           ------>MYB83 -------------TaNAC69(2)                     <---------LBD16    --------->At4g35610              ---- ----->DOF2          ---------->DOF2        ------->TEIL<-------PIF5 ------->TEIL                <---   aagacgaaccaccacgaagaagggaaagagaatacaaaaatagatgaaccggagtgctcgtggagttgctgaacctagccacaatatgatgttcttgtta  22258400                                                                             --------->ZAT6                                                                        <--------HAHB4                                                                        <---------ICU4                                                                        --------->YAB1                                                                        -------->HAHB4                                                                        <--------ATHB1                                                                        --------->ATHB51                                                                       --------->ICU4                         <---------ANAC55(2)                           <---------ATHB51                        <-------TEIL       <---------ANAC58            --------->AHL20(2)          <---------ANAC46      --------->CCA1(2)                      <---------YAB1          <---------ANAC58     --------->ARR11(3)                 --------->TOE2(3)          <---------ANAC58     <---------ARR11(3)    --------->YAB1  --------->YAB1    <----------DOF2    <---------YAB1 <---------TOE1(3)       --------->ANAC55(2)  <------ZmHOX2a(2)      <---------DAG2 ----->ANAC55(2)   <---------TOE2(3)       <---------ANAC58     ====================================HOX2a_HOX2a ------ANAC55(2)  <-----------GT1        <---------AHL20(2)<-----------GT1 <-----------GT1   ------>ZmHOX2a(1)   agtactatgtttacttgtattaacgatacataagatatatcatttacttgattactcatattttcgatccataataattacactacttccttttcctcta  22258500                               <---------AHL20(2)                               --------->AHL20(2)                            --------->ARR11(3)                  <---------AHL20(1)                  --------->ARR11(3)                                  <---------AHL20(2) <---------GLK1(2)                  <---------ARR11(3)      ----------->GT1         --------->AHL20(2)     --------->ARR11(3)   <-----------GT1--------->AHL20(1)    <------------CBF       <----------DOF2           <---------ARR11(3) <---------AHL20(2)         <---------ARR11(3) <---------TOE2(3)<-----------TBP  ------->TEIL--------   gatttaaacttgctaacaaatatttttaaagattttaatggaaattgttaacattttatacaaggcttttatataatcaaatgaaactatagattttggt  22258600                                                                         <---------AHL20(2)                                                                         --------->AHL20(2)              <---------MYB52(1)                                     --------->ATHB51       <---------AHL20(2)                                            <--------HAHB4               <--       --------->AHL20(2)                                            --------->AHL20(2)           ---    <---------ICU4<---------ZAT18                                    -------->ATHB1              <---   --------->ICU4 --------->ZAT14                                    <---------AHL20(2)          <--- --------->ANAC55(2)                                                <---------ATHB12             <--- <---------ANAC55(2)        <---------AHL20(2)  <<<<<<<<<<<<<<<<<LFY--------->ICU4            <------ --------->ANAC46 --------->ZAT18            --------->DAG2         <---------ATHB51   --------->GLK1(2) --------->ANAC55(1)      <----------DOF2  ---------->DOF2      ------------>CBF  ---------->DOF2<--- ->MYB59    <-----------RAV1(1)   <-----------GT1------------>CBF------------>ATHB5   <---------GLK1(2)   aacacataattaatctgttgtgctctctcttttattttactatgggaaaggtccaatgggcttaggcccaattatttaaacaaaaaaagattctaacttt  22258700               <---------ARR14(2)        ---------->DOF2       *TSS    --------->ARR14(2) -------------AGL15          --------->WOX13(1) ------------>AGL15       --------->ANAC58 --------------AGL3       --------->ANAC46                                                     <----- --------------AG         --------->ANAC58                                         <----------DOF2 --------------AGL2     ---------->DOF2               <---------At4g35610         <---------ANAC58 ----DOF2 ----------->GT1--------->WOX13(1)           --------->At4g35610         <---------ANAC58  < --------------AGL1    <------ZmHOX2a(2)         <----------DOF2             <----------DOF2   <-----   cttctaatggaaaagaaaatttgcgatcaagcaattactctctctctctctctttcttctgccatcgccaaaaacttgtcttttgcttctgggttttgct  22258800                                                                         --------->ARR14(2)                                                                         ------->TEIL                                                                         <---------ARR14(2)                                                                     ===============HOX2a_HOX2a                                                            <---------MYB52(1)         --------->KAN4(2)                                             <---------ANAC58   <---------WOX13(1)   <---------YAB1                                       <---------YAB1      <-------GAMYB<---------CCA1(2)  <---------                                     --------->YAB1       ------>ZmHOX2a(2)          --------->ICU4 -                                    --------->AHL20(2)    ==========================HOX2a_HOX2a     -                              --------->ANAC58          <---------ARR11(3)    <---------ZAT14--------  <---------YAB1              --------->ANAC46          --------->ARR11(3)   ------>ZmHOX2a(1)      - ----ANAC58                   --------->ANAC58    <----------DOF2    ------>ZmHOX2a(2)<---------ICU4- ---------------AGL15       <-----------GT1  <---------ANAC58 --------->ATHB12--------->ZAT14<------- ----ANAC58<---------YAB1<----------DOF2     <---------ANAC46 <---------MYB46(3)   --------->YAB1 <--   tcttatttttggtaagattgaatttttctttcaccccatttattatttcgtgcttttagatcgttgattgatctgtatcctgcagtgatcattctttaat  22258900 -DOF2                                                <---------MYB46(3) -------->ANAC58                                      <-----------RAV1(1) -------->ANAC46                                   <-----------RAV1(1)  <------NtERF2 ->AHL20(2)    <---------ANAC58                   <---------TOE2(3) <---------At4g35610 -------->ANAC58                              --------->YAB1        <---------ANAC58                < -------->ANAC55(2)                         <---------WOX13(1)      <---------ANAC58       ---------- --AHL20(2)    <---------ANAC58           --------->ATHB12      <----------DOF2  ---------->ID1<----- ---------GT1  <---------ANAC46          <---------YAB1     <---------ZAT18--------->ICU4 <---------TOE2(3)   ttacgaaattgttttttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgattgataatgttgttggggactttaggtgccatttttgtcgattttgtggttta  22259000                                                         --------->WOX13(1)                                                   <---------MYB46(3)                                                  <--------P                                                 <-------GAMYB  --------->ANAC55(2)     --------->ATHB12      <---------MYB46(3)                    <---------AHL20(2) -----------GT1    <---------WOX13(1)           --------->MYB55(2)                   --------->AHL20(2) ->GT1           --------->ATHB12              --------->ALFIN1                --------->ARR14(2) ----AHL20(2)   <---------YAB1                 <---------AtMYB61               <---------ARR14(2)   atttacctattgtatattgtgattgaatcgattgggagggtattgagaggtggttgtttcaatctaacaaaatcaagtgcaaatccattttatagccact  22259100               ------>ZmHOX2a(2)              <------ZmHOX2a(2)             <---------ARR11(3)                            --------->ARR14(2)   <----------DOF2             <---------AGP1                              <---------MYB46(3)    <---------ANAC58             <---------ARR14(2)                   <---------YAB1    <---------AHL20(2)              <             --------->ARR14(2)                 <-----------GT1     --------->AHL20(2)             <-             --------->AGP1                --------->TOE2(3)   <----------DOF2 <---------ANAC58    <-             --------->ARR11(3)            <----------DOF2 <---------ARR14(2)  <---------ANAC46   ---   tatcttctgctagtagatctacttgagttttaagagatgtgtcttctttaataccattgtggttccttttttaatttcatggcttaagtgaatgtttttt  22259200  Previous    Next  AGI:  At5g54745.1    Description:  DegP protease family. Identical to Putative Do-like 15 protein (DEGP15) [Arabidopsis Thaliana] (GB:Q3E8B4); similar to DEGP6 (DEGP PROTEASE 6), serine-type endopeptidase/ serine-type peptidase/ trypsin [Arabidopsis thaliana] (TAIR:AT1G51150.1); similar to Os05g0417100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055560.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15604.1); similar to hypothetical protein OsJ_017802 [Oryza sativa (japonica cultivar-group)] (GB:EAZ34319.1); contains InterPro domain Peptidase S1 and S6, chymotrypsin/Hap; (InterPro:IPR001254); contains InterPro domain Peptidase, trypsin-like serine and cys Range:  from: 22257482    to: 22258459    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g54750.1    Description:  transport protein particle (TRAPP) component Bet3, putative. similar to unknown [Populus trichocarpa] (GB:ABK94252.1); contains InterPro domain TRAPP I complex, Bet3 (InterPro:IPR016721); contains InterPro domain Transport protein particle (TRAPP) component, Bet3 (InterPro:IPR007194) Range:  from: 22258707    to: 22260947    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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