Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  --------->ANAC58                                --------->ANAC46                        --------->CCA1(2)                       <---------ARR11(3)   --------->DEAR3(2)                       --------->ARR11(3)  ------->TEIL                    <---------------------WRI1                 ----------->RAV1(2) --------->ICU4                        <-----------GT1                ------>NtERF2   --------->ANAC58                    <------ZmHOX2a(2) --------YAB1  --------->ANAC46 --------->AtLEC2    ---------->DOF2<---------ARR11(3)   ttttattctctatatcgacgcctgagatatatccaagcaaaaatgaatcgacgagaaagacgggggagagatcaaatttacaatttttaagagcgaaatt  22254200                                                                                   --------->YAB1                                                                    --------->ANAC58                                                                    --------->ANAC58     ---------->DOF2                                                         <-----------HVH21        <---------ATHB12                                          --------->ANAC58      --------->ANAC58 --------->ANAC58                                          --------->AtLEC2      --------->ANAC58 --------->ANAC58              --------->GLK1(2)           --------->ANAC55(1)--------->ANAC58--------->ANAC58             <---------GLK1(2)            --------->ANAC46   --------->ANAC58--------->ANAC58      --          --------->YAB1   ----------->GT1--------->ANAC58   --------->ANAC46--------->ANAC46<-------   gaacaaattcgattagaatcttttaaaaatagaaacaaaaatacacgcaaactctgaaatgtcacgaagcaagaaacacacacaatcaatagaaagaaac  22254300                                                                          ---------->DOF2             <-----------GT1                                          ------------------------>ANAC81    <------ZmHOX2a(2)                                              --------->ICU4   <---------ARR11(3)                                         ----------->GT1   --------->ARR11(3)                                       <---------ANAC58 -------->DOF2                          --------->ATHB12    <---------ANAC46               --------->AHL20(2) ---ID1   <---------ICU4          ------->TEIL              <---------ANAC58            ----------->GT1   aaaaagatcgaatttttacaaaaacccagaagaacgaatcgatgatttgtgagttttttttttcttgtaaaaattgaaaagaattagaagagattaaaaa  22254400                                                                   ---------->DOF2                                                     --------->TOE2(3)                                               --------->YAB1   --------->ANAC58                                              <---------TOE2(3) --------->ANAC58                                         <------ZmHOX2a(1)  ------------------------>ANAC81                                  <---------YAB1  <---------DOF5.7(2)--------->DAG2  ---------->DOF2               <---------At4g35610 <---------ANAC46--------->DAG2     <------ZmHOX2a(1)   cccagaaagaaagattaagactttggaaacagtaatctgattaggactatggtaacgtttaagagcaagaaaaggggaagagatttagaggataagaaga  22254500                                               <---------MYB52(1)                                             <-----------RAV1(1)                         ---------->DOF2  --------->GLK1(2)                                 <--------                      <----------DOF2    <---------GLK1(1)                                  ---------                   --------->ARR11(3)--------->HSFB2a(2)              --------->ATHB12      <--------                   <---------ARR11(3)<---------HSFB2a(2)           *TSS                   <----------   agagagagcgaagatgaagaagacctttaaagagttgttttagaaatctgttgtttcaaaaaacttcataaatgatttgtttttggtttcttatttatat  22254600                                                                                        <----------DOF2                                                                                  --------->ANAC46                                          <----------DOF2                         --------->ANAC58                                          ==================================================bZIP_DOF                                    <---------ARR14(2)                            --------->bZIP60(2)                                    --------->ARR14(2)                            <---------TGA1a                                    ------->TEIL                                  --------->O2                                 <---------ANAC58                                 <---------O2                                 <---------ANAC58                                 --------->TGA1a                                 --------->ANAC55(2)                              --------->ANAC58                                 <---------ANAC55(2)          ---------->DOF2     =================bZIP_DOF -AHL20(2)                       <---------ANAC55(1)          ==============================bZIP_DOF >AHL20(2)                      <---------TOE2(3)     --------->ZAT14           <---------ALFIN1 ---TBP                     <----------DOF2       <-----------GT1             ------>MYB83         <- -TBP                      --------------------->WRI1 <---------ZAT14         ------>MYB46(1)     <--   atcaaaaaacaaattttggattaagttgttcttttacgtatcgtctttgtatttactacagcgagaaagagagactcaccttccacgtctctttccctat  22254700                                                                               <---------MYB52(2)                                                                             ------>MYB46(1)    <----                                                                             ------>MYB83     -------                                                                        <-----------GT1       <------                                                                      <---------AHL20(2)     --------                          -------->ATHB1                           <---------ICU4            <-------                          --------->ATHB12                         --------->ATHB51         <--------                          <---------ICU4                           --------->YAB1         <---------ICU4                         <---------ATHB12                          <------------ATHB5     -------->ATHB1                    --------->TOE2(3)                              <--------HAHB4        <---------ATHB51                   --------->YAB1                     <---------YAB1  --------->AHL20(2) --------->AHL20(2)            --------->AHL20(2)                    <-------GAMYB   <---------ATHB51       <---------AHL20(2)            <---------AHL20(2) <---------TOE2(3) <------MYB46(1)  <---------ATHB12       --------->ICU4           --------->AHL20(2) --------->YAB1     <------MYB83     --------->AHL20(2)<---------MYB59 --------YAB1     <---------YAB1                 <---------MYB46(3)<--------ATHB1   --------->TOE2(3) -------AHL20(2)  <---------TOE2(3)          <-----------RAV1(1)  --------->ICU4    --------->TOE1(3)   ttttattcaaattttaaattaacataaatcattgagaatgtctggttttgttggttatacttataccaataattaaaccaaacaaacctaaattattaat  22254800                                                            --------->MYB52(1)                                                         --------->MYB46(3)                                                         <---------MYB52(2)                          ------>MYB83            --------->AHL20(2)     <---------AHL20(2)   ------>MYB46(1)         <---------AHL20(2)     <---------YAB1       -------->P          <---------AHL20(2)    --------->AHL20(2)   --------->MYB55(1)   --------->AHL20(2)    <---------AHL20(2)  <---------MYB46(2)   --------->AHL20(1)   <---------MYB46(3) -----WOX13(1)          <---------MYB59      <---------AHL20(2)   --------->MYB55(2) -->ATHB12              <---------MYB111(2)  <---------AHL20(1)  <---------AtMYB61 ---AHL20(2)            <---------MYB111(1)  --------->AHL20(2) <---------MYB52(1) ->AHL20(2)          <-----------GT1   --------->At5g28300 --------->MYB52(1)     ---------->DOF2 --AHL20(2)      <---------ZAT6       ----------->GT1  <-----------GT1 <---------WRKY18(1) -YAB1     <---------HSFB2a(2)    <---------TOE2(3)<---------AHL20(2) --------->WRKY38(1)   tgaaattttaattctcgtagtgtttacctacccattaatgtggtaaatttaattttataacaaaccggtggtttgaccaaaaaaaaaagaaccgagtttg  22254900                                                                       <---------ZAT18                                                                       --------->ZAT18                                                                     ------->PIF5                                                                     <-------PIF5                  <-                                                                    =============================bZIP_DOF                                                                    <---------ANAC58               --                                                                    =============================bZIP_DOF                                                                    <---------ANAC46              <--                                                                    <---------ANAC58              ---                                                                    --------->O2                 <---                                                                    <---------O2                 <---                                                                    --------->TGA1a              ----                                                                 <---------TOE1(1)               <---                                                     --------->ANAC46<---------SPL7              <---                                                --------->ARR14(2)  <---------TGA1a              <---                                                <---------ARR14(2)  <---------bZIP60(2)         <----                          <-------TEIL       --------->YAB1      <---------TOE2(1)          =========                      <---------TOE2(3)     <---------ATHB12    --------->SPL7        ------>ZmHOX2a(1)                      <---------YAB1       ------>MYB83     <---------------AtSPL8    ===============        <---------At4g35610--------->YAB1  ------>MYB46(1) --------->ICU4             <----------DOF2      <-----------GT1<-----------GT1      --------->WOX13(1)<---------ICU4    <---------ZAT6<--------   aactaaatttagcttatatgtattaacattcataaactctaaaccaatcaaatccaccgaaattagtacgacgtgcgctagtcttatcctttttcttttc  22255000     --------->ZAT18     <---------ZAT18   <---------SPL7  <---------ANAC58  <---------ANAC46  <---------ANAC55(1)  <---------ANAC55(2)  <---------ANAC58  <---------TGA1a  --------->TGA1a  --------->O2  <---------O2  <---------bZIP60(2) --------MYB52(1) --------->HVH21                         <---------AHL20(2) ---------HVH21                      --------->AHL20(2) ------>LBD16                 --------->TOE2(3) ------ANAC55(1)        <---------ARR14(2) ------ANAC46           <---------ARR14(3) ----->ANAC55(2)        --------->ARR14(2) ------ANAC58           <---------ARR11(3)                                     --------->AHL20(1) ------ANAC55(2)        <---------GLK1(2)<---------ICU4                ----------->GT1 ------ANAC58           --------->ARR11(3)                             <---------MYB46(3) -----LBD16      --------->At4g35610 <---------AHL20(2)            --------->ATHB12      <---------MYB46(3) ===========bZIP_DOF    --------->ARR14(3)                --------->AHL20(2)   <---------AHL20(2) ===========bZIP_DOF  ----------->ARR10  --------->AHL20(2)       <---------AHL20(2)  <----------DOF2 --DOF2     <---------ZAT6  <---------YAB1                <---------AHL20(2)   --------->AHL20(2)   cgtgacgtgcgctagtcttagatgaagattttcattagtttaattttttctaatgtgtttttaattagtttattggttaaataaaatactttggttcgac  22255100  Previous    Next  AGI:  At5g54730.1    Description:  AtATG18f (Arabidopsis thaliana homolog of yeast autophagy 18 (ATG18) f). similar to AtATG18h (Arabidopsis thaliana homolog of yeast autophagy 18 (ATG18) h) [Arabidopsis thaliana] (TAIR:AT1G54710.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39041.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 22251015    to: 22254567    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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