Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             --------->AHL20(1)                           <---------AHL20(1)                           <---------AHL20(2)   ----------->GT1        --------->AHL20(2)  --------->DAG2          <---------AHL20(2)                  <---------ZAT6 ---------->DOF2          --------->YAB1       <---------TOE1(2)        <---------TOE1(2) -----------AGL15     --------->AHL20(2)       <---------TOE2(2)   --------->GLK1(2) ---->ANAC46 <----------DOF2          <---------AHL20(2)  --------------------->WRI1           <-----   ataaaaagtaaaatgcttttagtataaattatattgctattttttctcatatgttttttttttagtgagaatcgaatgttttgtcgaagaaatcgaaatc  22238700                             <---------AHL20(2)                          --------->ARR14(2)                          <---------ARR14(2)                 <---------ICU4              --------->ANAC55(2)---------->DOF2   --------->ZAT14      --------->LBD16                                               <------ZmHOX2a(1)   <---------ZAT14     --------->HSFB2a(2)                              --------------->AtSPL3   <---------ZAT18    <---------LBD16  ---------->DOF2             <---------------------WRI1       <   --------->ZAT18  <-----------GT1<----------ID1                 ---------->DOF2     =============== ----ATHB12 <-----------GT1  --------->AHL20(2)                >>>>>>>>>TBF1------->TEIL            -   aagagttcactattttacataatttccggatttaaaaaagaaaaagaaaatgagggaagttagaagaagaaagaaacgtaccaagagaggagcaaggaga  22238800        <---------ETT(2)                                                                        <----        --------->ETT(2)                                                                        -----       <------NtERF2                                                                            -----       <---------------------WRI1                                                               <----      ------>NtERF2                                                                            <-----     --------->DEAR3(1)                  ------->TEIL                                          ------  ------>ZmHOX2a(2)              ---------->DOF2     --------->DAG2                            ------ <---------GLK1(1)     --------->ALFIN1  --------->GLK1(2)                                     <----- ---------ARR14(2)    <---------------------WRI1    ---------->DOF2                            ------ ========HOX2a_HOX2a ------->GAMYB       <---------ARR14(2)                                   <------ -------->ARR14(2)--------->MYB52(1)     --------->ARR14(2)            ----------->GT1        <------   gggatcgccgtcgatagtatcaacggtggagagaacaaagacgaatcggagaagaaaagtgaagaagagtagagagtaaaacaccatttgataagagaat  22238900           --------->TOE2(3)         -------->P         ------>MYB46(1)         ------>MYB83       <---------MYB59       --------->AtMYB61      --------->MYB46(3)      --------->DEAR3(2)    <<<<<<<ZML2 --------->HSFB2a(2) --------->HSFC1(1) <---------HSFC1(1) <---------HSFB2a(2) -----HSFB2a(1) ---->HSFC1(2) ---->HSFB2a(1)                                           <---------TGA1a                  <---------CCA1(2) -----HSFC1(2)                                            --------->O2                     <---------At4g35610 ----ARR14(2)                                             <---------ANAC55(2)             ------->TEIL --->ARR14(2)                                             <---------O2           --------->ANAC55(2) --->ARR11(3)                                 ----------->HVH21     --------->ZAT2  <-----------GT1 ----ARR11(3)                                <-----------HVH21      <---------ZAT2  ------->TEIL --->GLK1(2)             ------->TEIL ------>ZmHOX2a(1)   --------->ANAC55(2)--------->CCA1(2) ---ARR14(1)     <----------DOF2      ==============================bZIP_DOF<---------ARR11(3) ---GLK1(2)--------->TOE1(3)          <----------DOF2 <-----------HVH21     --------->ARR11(3)   cttctagaaccaaccttaacttttatgaactctctcaatcctttccctgtgaccacagtcacatgtctcaagctcggagatatatgtaactgcatctctc  22239000                                                                                              <------                                                                                     <---------TOE1(2)                                                                                     <---------TOE2(3)                                                                                  ------>ZmHOX2a(2)                                                                                --------->ARR11(3)                                                                                <---------ARR14(2)                                                                                <---------ARR11(3)                                                ---------->DOF2                 --------->ARR14(2)              <----------DOF2    <---------AtLEC2          ------->TEIL         <---------AGP1-------      ------>ZmHOX2a(1)      <----------DOF2  ----------->HVH21   *TSS         <---------CCA1(2) <---   tgtttctcctctgtttctttgtttattatgtctttgtatggtttttgtctgaaaggagatggatgttcgaagagggaaactggatcttacgttgttatgt  22239100                                            <----------DOF2                                           <---------ANAC58                                    ------>MYB46(1)                  --------->ARR11(3)                                    ------>MYB83                     <---------ARR11(3)           --------->ATHB12         --------->MYB52(1)              --------->At4g35610      <---------YAB1              <---------MYB111(1)        <---------ICU4    --------->YAB1                <---------MYB59           <---------AHL20(2)                    ===   <---------YAB1                 <---------MYB46(2) <---------TOE1(3) --------->YAB1             --- ---ANAC55(2)                  <-----------GT1       <---------TOE2(3)<------ZmHOX2a(2)<---------ANAC46 -->ANAC55(2)           <---------CCA1(2)  <---------ANAC58<---------YAB1              <---------ANAC58 ---------CBF        <-------TEIL--------->ANAC55(2) --------->MYB59<---------At4g35610<---------ANAC58   attgtatgattattcattaggggtccatatcatttacctaaccttgctttgtgtttaggttattaatggcagatcataactctgatgtttcttgtgaata  22239200               <-------GAMYB              <------MYB83              <---------MYB46(3)              <------MYB46(1)              --------->MYB55(2)           <-------GAMYB          <-----------RAV1(1)          --------->ALFIN1       ------->MYC3       <-------MYC3      <---------ANAC58      <---------ANAC46      --------->O2      --------->TGA1a      =============MYC_MYB                                 <----------DOF2      =============MYC_MYB                               <---------HSFC1(2)      <---------TGA1a                                    <---------HSFB2a(1)      <----------DOF2      <---------O2                                    <------ZmHOX2a(1)   --------->ARR14(2)      <---------ANAC55(1)                           --------->MYB59       <---------ARR14(2)      <---------ANAC58                       ------->TEIL--------->HSFC1(2)    --------->ANAC46     < ===============bZIP_DOF                  --------->ANAC55(2)             <---------MYB52(1)        < ------->DOF2<---------AtMYB61  <---------ALFIN1  <<<<<<<<<MYB98         <-------GAMYB   <----------DOF2   aaaaggaaacgtgtgttggttagaattagaaacaccacggttttatgtatttgttaggaagctttgggttttctcggttatgcgctattcggtttttggt  22239300               <---------MYB46(3)              --------->ALFIN1           --------->ALFIN1         --------->ZAT2         <---------At4g35610         <---------ZAT2 ------->TEIL <---------AtMYB61                                          ------->TEIL <---------ARR11(1)          <-----------GT1                            <---------CCA1(2) ---------GLK1(2)         <---------ICU4                           ------->TEIL   <---------AtMYB61 ---------CCA1(2)        --------->ICU4                            --------->GLK1(2)   tcgaatctctaagctggtggtggaatcaatattacacattagtacattacttcgattactaaaccgatgaatctgaatcttgttttggtttatattggta  22239400                                                                             --------->ANAC58                                                                             --------->ANAC58                 --------->MYB52(2)                                         <---------LBD16             ----------->GT1                                            <---------ZAT18             <------MYB46(1)                                          <---------MYB52(1)             <------MYB83                                        <-----------GT1            --------->MYB59                              --------->DAG2 <---------ZAT14            --------->MYB46(2)               <---------------AGL15   --------->LBD16               --          <---------MYB52(1)           <----------DOF2<------ZmHOX2a(1) --------->ABI4(2)          <-        <---------MYB46(3)      <-------GAMYB--------------->AGL15 <---------LBD16                <--       ------>ZmHOX2a(2)<----------DOF2------>ZmHOX2a(1)---------->DOF2 --------->ZAT14      <-------   tatgtttgatcggttaggttatttggatttatggggttatcctttttctacttgtaggaaaagtttttttccggtggactcggaataccattcagtgcaa  22239500                                                  ------>ZmHOX2a(2)                                                 <------ZmHOX2a(2)                                                 --------->CCA1(2)                                                --------->ARR11(3)                             --------->ANAC55(2)<---------ARR14(2)                         <-----------TGA1       --------->AGP1                         <-----------HVH21      --------->ARR14(2)                                  <                        --------->ANAC58        <---------AGP1                                  <----    ------->TEIL        --------->ANAC46        <---------ARR11(3)                            <------MYB46(1) <---------YAB1         --------->ANAC58      ----------->ARR10                            <---------MYB52(1) ------->YAB1         <-----------GT1   <---------YAB1                             <---------AHL20(2) --------ICU4       <---------AHL20(2)--------->YAB1                       <---------GLK1(2)  <------MYB83 -------ATHB12      --------->AHL20(2)--------->ATHB12                    --------->ZAT2--------->MYB59 --ZAT18        --------->AHL20(2)   <---------YAB1                       --------->At4g35610--------   atcatgaaactcttaaaatgaattaaacgtcacatgtttatgattagtaagatctgaaattttgcgatagttcaacagcttcggtttaattcggttcggt  22239600  Previous    Next  AGI:  At5g54690.1    Description:  GAUT12/IRX8/LGT6 (GALACTURONOSYLTRANSFERASE 12); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups. similar to GAUT13 (Galacturonosyltransferase 13) [Arabidopsis thaliana] (TAIR:AT3G01040.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO39049.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78125.1); similar to secondary wall-associated glycosyltransferase family 8D [Populus tremula x Populus alba] (GB:ABP65660.1); contains InterPro domain Glycosyl transferase, family 8; (InterPro:IPR002495) Range:  from: 22236450    to: 22239066    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version