Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        --------->YAB1                  <----------DOF2                    <---------AHL20(2)                  <---------DAG2                    <---------AHL20(1)               <---------ALFIN1                     --------->AHL20(1)    <---------ARR11(3)                              <---------AHL20(2)    --------->ARR11(3)                              --------->AHL20(2)   <---------GLK1(1)                               --------->YAB1   <---------CCA1(2)                              <---------YAB1   --------->GLK1(1)                          --------->TOE2(3) -->ANAC55(2)-------->P<----------DOF2  <----------DOF2  --------->YAB1--------->YAB1               - ---GT1    --------->MYB46(3)   <-----------GT1  --------->AHL20(2)  <<<<<<<<<<<<WRKY18            --   atctgatatctgaactaccacttttcttttttttttacatttctttcacattaatataatcatatttagtcaatagtcaaaaactcaaaattagtagaaa  22196600                                                        --------->YAB1                                                    --------->AHL20(2)            <-----------GT1                         --------->AHL20(1)        <---------AHL20(1)                          <---------AHL20(1)               --------->AHL20(2)        --------->AHL20(1)              <---------AHL20(2)                      --------->ICU4        --------->AHL20(2)          --------------->AGL15                      --------->AHL20(2)<---        <---------AHL20(2)          <---------------AGL15             <---------------AtSPL8<--------    <---------AHL20(2)             ----------------->AGL3            <---------ZAT14 <---------AHL20(2)   --------->AHL20(2)              <-----------------AGL3            --------->ZAT14--------->AHL20(2)   <---------AHL20(2)              ================================================================== -------->ATHB12               <----------DOF2      <---------AHL20(2)--------------->AtSPL8--------- ------->ICU4             <-----------GT1---------->DOF2----------->GT1----------->GT1<---------YAB1   aatgatttattttattaccatgagcttgttactcttttctatataaagacacaatttattgtaatatagagtatagtacataaaaattaaaattatgtaa  22196700                                                                         <---------AHL20(2)                                                                         --------->AHL20(2)                                                                      --------->WOX13(1)                                                                     --------------->AGL15                                                                     <---------------AGL15                                  <---------YAB1             --------->AHL20(2)                            <---------------AGL15            <---------AHL20(2)                            --------------->AGL15        <---------AHL20(2)                           ===========================================================MADS_MADS                           <-----------------AGL2       <---------AHL20(1)                     --------->ANAC58                   --------->AHL20(1)       --------------------                     --------->ANAC46                   --------->AHL20(2)     ---------->DOF2                     --------->ANAC58   <------ZmHOX2a(1)--------->AHL20(2)<---------TOE2(3)         --------->TOE2(3) ----------------->AGL3 --------->TOE2(3)--------->ANAC58        --------->YAB1     <-----------------AGL3--------->ANAC55(2)----------------->AGL3 ------ATHB12   <---------ICU4  --------->YAB1   <---------ANAC55(2)--------->MYB46(3) -ANAC55(2)     --------->YAB1  -------->HAHB4   ----------->GT1   --------->ANAC58             ----- ===========================================MADS_MADS   <---------AHL20(2)---------->DOF2  ---------- >ANAC55(2)--------->AHL20(2)  <---------YAB1    <---------ANAC46--------->MYB46(3) ----------->GT1   tcaattgttaacataaaatcatcacacaatctaattatagtaggagtagtaacgtaaatttaattaaacaaccaattaaagaaaagaagaaaaatgaaaa  22196800          <---------MYB52(1)        <---------ANAC58                                                            <-----------GT1    <----------DOF2                                                             <----------DOF2  --------->HSFC1(2)              <---------YAB1                             <-----------GT1  <---------HSFC1(2)        --------->AHL20(2)                              <---------AHL20(2) ---->ANAC81                <---------AHL20(2)   <-----------GT1     <---------AHL20(2)<---------DAG2 ----->DOF2          <-----------GT1   --------->YAB1  ----------->GT1      <-----------GT1  <------- ->GT1  <---------ANAC58 <----------DOF2      ----------->GT1       --------->AHL20(2) <----------DOF2   aagaagctttccgtttcattgttttagcttttaattttgaataagaagttgttacatttgtaaaaacaaattttatatttaacttttaacttttttttat  22196900                                          <---------------AGL15                                    <---------ICU4                                   <---------YAB1                               --------->ARR11(3)                           ---------->DOF2<----------DOF2                        --------->AHL20(2)--------------->AGL15                       --------->AHL20(2)<---------ANAC58                   <---------AHL20(2)    <---------AtLEC2                   --------->AHL20(1)    <---------ANAC58                   --------->AHL20(2)    <---------ANAC46          ----------->RAV1(1)----------->GT1       --------->ARR14(2)          *TSS        <--------- --AHL20(2)  --------->TOE2(3) <---------ARR11(3)  <---------ARR14(2)<----------DOF2   <---------GLK1(2)   tctaacacattacaacataaataaaataaaaaagataatttttgcttgaagtagaacctctctctcagtctctttctcactattctttggattcttttct  22197000                        <---------ARR11(3)                            --------->At4g35610            ----------->ARR10       <----------DOF2                   <---------At4g35610          ---------->DOF2   <-----------GT1                    <---------YAB1       --------->ANAC58 <---------AHL20(1)                   <-----------GT1     ---------->DOF2    --------->ARR11(3)              <----------DOF2  --------->At4g35610    --------->YAB1      --------->AHL20(1)             --------------->AGL15       ------->TEIL     - -DOF2 --------->ANAC58--------->YAB1              <----------DOF2 <-------TEIL  --------->ZAT18-----   ctgtaatcaaagcaaagctctgcaaaaatatttctctccttttctcttcaaaactttccttttttatgattcatctgctaaaatgcaccaattttctata  22197100                                                                                       <---------ZAT14                                                                                       --------->ZAT14                                                                                    <---------ANAC58                                                                                    <---------ANAC46                                                                              <---------MYB52(1)               --------->ANAC46                                               --------->ICU4 <------MYB83              --------->LBD16          <------------------------ANAC81        <---------YAB1 <------MYB46(1) ------>ZmHOX2a(1)               <---------At4g35610                       ---------->ID1   --------- -------->TOE1(3)              <-----------GT1                        <-----------RAV1(1)  <--------P ---->YAB1   <-----------RAV1(2) ----------->RAV1(2)             <----------DOF2    <---------ANAC58   atccttcacatttctccaggtaacacattcgattcacctgttttttttttttttttggtcttcagcgattttttgttgtcgttattgtgtgtagtaggtg  22197200                                                                        ----------->HVH21                                                                       <----------CDC5                                                                      <---------At4g35610                                                                      --------->At4g35610                   <---------LBD16                                   <---------ANAC46                   --------->LBD16                               <---------ANAC58                  --------->LBD16                                <---------ANAC58                  ------>ZmHOX2a(1)                              <-------GAMYB                      -                 <---------LBD16                                <------MYB46(1)                 <----                ========================RAV                     <------MYB83               --------->ANAC58         <----------DOF2      ---------->ID1                    <---------MYB46(3)         --------->ANAC58      <-----------GT1       <-----------RAV1(1)                --------->MYB59          <----------ID1  <---------AHL20(2)   <---------ARR14(2)   ---------->DOF2    <---------AtMYB61 >>>>>>>>>TBF1  ----- >MYB111(1)     ----------->RAV1(2)   <-------GAMYB  <----------DOF2--------->ZAT18 >>>>>>>>>TBF1----   tgattttttttcttttcttcctggggatttttgttgttttcgttgagaaagtcttctttgggggtttggttgcgctgaaggaagaagaagaagacgaaat  22197300       --------->AHL20(2)       <---------AHL20(2)                                              ---------->DOF2        <------ ---------->GT1                                                 <------NtERF2          <---------HSFB2a(2) -----ATHB51            ----------->GT1       ----------->GT1  ------>NtERF2        --------->GLK1(2) ---->ICU4  --------->MYB52(1)           <---------YAB1       <---------ANAC46     <---------GLK1(2) ----->MYB52(1)------->GAMYB             <---------TOE2(3) <---------DEAR3(1)  --------->ANAC46   aatggaaaattaaacaacgaaaattagggaaaattagagaattaagaaaggttttattcaatcggcgcgtttcaaaagtctacgcgattctcgagattca  22197400                             --------->ZAT14                     <------ZmHOX2a(2)                    <---------ARR14(2)                    --------->ARR11(3)                    --------->ARR14(2)                    <---------ARR11(3)                <---------LBD16               <---------LBD16               =============HOX2a_HOX2a                                       <-------TEIL               ------>ZmHOX2a(1)                                             --------->ARR14(1)               ==============HOX2a_HOX2a                                     --------->CCA1(2)        =====================HOX2a_HOX2a                 <---------TOE2(3)  --------->TOE1(2)--------        ------>ZmHOX2a(1)    <---------ZAT14        ------>ZmHOX2a(1)       <---------ARR14(2)    --------->ARR14(2)=====================================HOX2a_HOX2a      --------->ARR14(2)    <---------ARR14(2)------>ZmHOX2a(2)           <-----------------AGL1    --------->ARR11(1) -TEIL  ====================HOX2a_HOX2a          ---------->ID1           ----------->ARR10  <-------   ttttcaaatccttcttcctcgggatctatagtatagagcttcagtaattttgtcctcttgaggtatttgtttgaagaagatacgaattgatttttagctg  22197500  Previous    Next  AGI:  At5g54590.1    Description:  protein kinase family protein. similar to serine/threonine protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G15730.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO39063.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) Range:  from: 22196979    to: 22200052    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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