Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <---------ANAC55(2)             --------->ANAC55(2)             <---------ANAC58             <---------ANAC46             <---------ANAC55(1)             <---------ANAC58                                             ------>ZmHOX2a(1)  <------MYB46(1)                                                    <----------DOF2  ----------->GT1                                                 <---------ARR11(1)  <---------ANAC55(2)                                             --------->ARR11(3)  <------MYB83                                    <----------DOF2 <-----------ARR10 --------->MYB46(2)       --------->ARR11(3)    --------->LBD16   --------->GLK1(2) --------->MYB59          <---------ARR11(3)   --------->ANAC46   <---------ARR11(3) --------->MYB111(1)     --------->YAB1       <---------LBD16     --------->ARR14(2) ---------MYB55(1)   --------->TOE2(2)      --------->ARR14(2)    <---------ARR14(2) --------MYB52(1)    --------->TOE1(2)      <---------ARR14(2)   <---------CCA1(2) ---->ICU4  <<<<<<<<<NAP<---------YAB1------->GAMYB       <---------GLK1(1) --YAB1   --------->TOE2(2)           --------->TOE2(3)   --------->GLK1(1)                 <--------   tgttaggtaaaacttacgtgaaacctatgatattgatcaaccgtagtatccgcattgctgaaatccagtatctttcctgttgatcaagaacgataccatt  22187100                         <---------LBD16                                       <---------------------           --------->TOE2(3)                                        <-----------HVH21 <----------DOF2           --------->TOE2(2)          <----------DOF2          ---------->DOF2 <----------DOF2     <-           --------->TOE1(2)      ---------->ID1           <---------ANAC46------->MYC3           <-- -YAB1    <---------HSFB2a(1)   --------->MYB52(2)       ------>ZmHOX2a(1) <-------MYC3    <---------   gagttaactaaaaccttcgtgatgttttctgggtttgtttctttgatacctggtttctccttcgtgaaagtgtcccatatgctttctcctttgtttcctt  22187200                                                   --------->ARR11(3)                                                   --------->ARR14(3)     --------->ZAT2                                <---------ARR14(3)     <---------At4g35610                           --------->GLK1(2)     --------->At4g35610                           --------->ARR14(2)     <---------ZAT2          --------->ANAC58      <---------ARR11(3)  XXXXXXXXXXXXXXXXXXXX>MIR396A     <-----------RAV1(1)             <-----------RAV1(1) ---ANAC81             <---------ANAC58 <---------ANAC58         <----------DOF2 ----------HVH21       <---------ANAC58 <---------YAB1       <----------DOF2                        > --------DOF2       --------->GLK1(1)   <---------ANAC58  <---------MYB52(1)                     >>>> --GT1    ------>ZmHOX2a(1)  --------->ANAC58      <-----------ARR10      <------ZmHOX2a(2)   >>>>>>>   ctttcacagctccttcgaactgatttcttgcaagaaaatgttgcgattgtcaaaatcttcgttctttctttgttggatcagtttggagaagatgaagaag  22187300                  <---------At4g35610                  <---------ZAT2                                 <---------ZAT2                  --------->At4g35610                            <---------At4g35610          ----------->RAV1(2)                                    --------->At4g35610          <---------At4g35610                           --------->ARR14(2)           --------->ANAC55(2)      <-----------HVH21                                 <---------ARR14(2)--------->GLK1(2)        <- >>>>>>>>TBF1  <--------P          --------->LBD16 ----------->GT1 <---------YAB1    <---------ANAC55(2) >>>>>TBF1<---------O2            <---------ANAC46<---------HSFB2a(2)    <---------GLK1(2)       <--- >>TBF1   <---------ZAT2  --------->GLK1(2)       --------->HSFB2a(2) <---------WOX13(1)       <-----   aagaagaatgtcacctggtaagctgaagaagctgttccgaatacaaatccatctggaaaatttgctctgctgatagattctgaagaaacgtgatcaagag  22187400         <----------ID1                                <-----------------AGL3    --------->DAG2 ------TEIL        --------->ANAC58                 --------->GLK1(2)           ---------->DOF2 ------SPL7        --------->ANAC58             <---------TOE2(3)     <---------TOE1(2)            -- ----------AtSPL8--------->MYB52(1)            ---------->DOF2   <-----------HVH21        ---------->DOF2   gtacgaagaagacgacgaagaacggaaacagaactaagacgagtctcattaaagattccattttttgggtcgcatgaatagagaaagtgagagaaagaga  22187500                                                                          <---------AHL20(2)                                           --------->ANAC58   <---------ANAC46                                           --------->ANAC58   <---------ANAC58                                --------->ARR14(2)            <---------ANAC58                                --------->ARR11(3)            --------->ALFIN1               --------->AHL20(2)--------->CCA1(2)          <---------ANAC58                   ------   --------->DAG2               --------->ARR11(1)          <---------ANAC58                   ====== --------->CCA1(2)              <---------ARR14(2)          <---------ANAC46      ---------->DOF2 ------->CCA1(2)<---------AHL20(2)      <------NtERF2    <---------AtMYB61--------->AHL20(2)>>>>>>>>>TBF1   gagataaggggatggaattttatggtgaatgaaagatttggaggcaagaaaatggagttttggtgtgtgtgtgtttttaatttgtaaagttgaagaagaa  22187600                                                                                   <-------MYC3                                                                                   ------->MYC3                                                                                  --------->TGA1a                                                                                  --------->O2                                                                                  <---------TGA1a                                                                                  --------->ANAC58                            <----------DOF2                                       --------->ANAC46                        <---------O2                                              ===================                        ==============================bZIP_DOF                    <---------O2                        --------->ANAC58                                          --------->ANAC55(1)                        --------->TGA1a                                           --------->ANAC58                        --------->ANAC58                                        <---------ALFIN1                        --------->O2                                         --------->ZAT18                        <---------ANAC55(2)                                  --------->ZAT14                        <---------TGA1a                                      <---------ZAT18                        ===============bZIP_DOF                              <---------ZAT14                        =========================bZIP_DOF                 <---------At5g28300                ---------->DOF2                                          <-----------GT1        --------->ZAT18 --------->ANAC55(2)                           <----------DOF2      <---------YAB1 <------ZmHOX2a(1) --------->At4g35610<----------DOF2                 ======================bZIP_DOF ---->DOF2      ==================bZIP_DOF =================================================bZIP_DOF =================================bZIP_DOF <----------DOF2            <---------DAG2   <---------ANAC46   agaggaagagtgcaaaacaaaagctcacgtcttttgaaggcttttctttggttttgacatttgttctctctacttttactgcacacgtttcttatacttg  22187700                                                                           <---------MYB46(2)                                                                           <---------MYB111(2)                                                                           --------->MYB46(3)                                                                         ------>MYB83                                                                         ------>MYB46(1)                                                                         --------->MYB52(1)                                                                       <---------MYB59                                                                       <---------MYB46(2)                                                                       <---------MYB111(1)         <-                                                                       <---------MYB111(2)         <-                                               --------->MYB52(2)     --------->ANAC55(2)         <--                     <-----------GT1        ------------>MYB.PH3(2)   --------->ANAC46            ---             <---------TOE2(3)            --------->DAG2              <---------At4g35610      <-----             <---------TOE1(3)           ---------->DOF2 ----------->HVH21 <---------MYB111(1)-------            ---------->DOF2    <---------TOE2(3)        <---------WOX13(1) <------------MYB.PH3(2)--- ======================bZIP_DOF<---------YAB1  <---------MYB46(3)   <-----------GT1   <----------DOF2   tgccaaaaactttttaaagttgtttactctcttaagataaaaaaaaagtttgttactgagtgacactgattcacctaactacctatgtcttttttttaaa  22187800                                                                                     <---------DAG2                                                                                   ------->TEIL                                                                                <---------ANAC55(2)                                                                                --------->ANAC55(2)                                                                               <---------------AtSPL8                                                                               --------------->AtSPL8                                                      <---------AHL20(2)     <---------AHL20(2)    <---------YAB1                                    --------->AHL20(2)  <---------ARR11(3) --------CCA1(1)                                     <---------AHL20(2)   <---------AHL20(1) --------RVE1(1)                                --------->YAB1            --------->ARR11(3) -------ARR11(3)                       --------->ANAC55(2)                --------->AHL20(2) ------>ARR11(3)                       <---------ANAC55(2)                --------->AHL20(1)       -- ----TOE2(3)                  ------->GAMYB <---------YAB1                <---------AHL20(2)   ------ --->DOF2                  <-----------GT1--------->YAB1  <-------TEIL --------->YAB1<----------DOF2 ------>ARR14(2) ----------->GT1     <-----------GT1 --------->AHL20(2)--------->AHL20(2)      <-----   gatattcttcttgatagtcttgttatttgtaaccccaaattacatgataatcaaattaaattcatagattgaataatatattatgtactttattttgaga  22187900                       <---------AHL20(2)                      <---------AHL20(2)                      <---------AHL20(1)                      --------->AHL20(2)                      --------->AHL20(1)                     --------->YAB1                 <---------AHL20(2)           --------->AHL20(2)          <---------AHL20(2)          --------->AHL20(2)         <---------AHL20(2)         --------->AHL20(2)      --------->AHL20(1)      --------->AHL20(2)      <---------AHL20(2)                           --------->ARR14(2)      <---------AHL20(1)                           <---------ARR14(2)                      --------->YAB1 --------->GT1   --------->AHL20(2)   <---------YAB1      --------->AHL20(2)<---------ANAC58 --->At4g35610--------->AHL20(1)     <---------TOE2(3)    <---------AHL20(2)<---------ANAC46 ----At4g35610<---------AHL20(1) <----------DOF2  <---------CCA1(2)         <---------ANAC58        -   tgagttaataaattaatatataaatataatgtgaacttttatgttagcatccatatccatttatatatgttattttttgtgtgtttacacttatcacaaa  22188000  Previous    Next  AGI:  At5g54569.1    Description:  other RNA Range:  from: 22184575    to: 22187764    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g54570.1    Description:  glycosyl hydrolase family 1 protein. similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT1G26560.1); similar to Os03g0212800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049358.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39084.1); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781); contains InterPro domain Glycoside hydrolase, family 1; (InterPro:IPR001360) Range:  from: 22184862    to: 22187461    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version