Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                <---------HSFB2a(2)                                              <---------HSFC1(1)                                              --------->HSFB2a(2)     <------ZmHOX2a(1)                        --------->HSFC1(1)     <---------ICU4                 <----------DOF2 ---------DOF2    --------->TOE2(3) <---------DAG2                <------ZmHOX2a(1)              ---- >YAB1     --------->TOE2(3)     <---------ALFIN1     --------->GLK1(1)    --------->YAB1  <---------ANAC55(2)   actttcaggattacattaatccctaatcgacatctacactttttgtttctagagagaaatcgacataaggagcaaaatcaaaatgaagacaatatgtaaa  22173300                         --------->ARR11(3)                         <---------ARR11(3)                         --------->GLK1(2)                        --------->RVE1(1)                        --------->CCA1(1)                  --------->MYB46(3)                 ------>MYB46(1)                                                                  <--                 ------>MYB83                                                                     <--                 --------->ANAC46                                                                 <--                 --------->ANAC58                                                                 <--                 --------->ANAC58                                                    --------->ARR14(2)               --------->AtMYB61            <---------AHL20(2)                       <---------ARR14(2)            <-----------GT1                --------->YAB1                            --------->MYB52(1)          --------->KAN4(1)           <----------DOF2                         <---------ZAT14     ---          <---------KAN4(1)         <---------YAB1                            --------->ZAT14     <--          <----------TaMYB80       <-----------GT1                          --------->ANAC46    <----         ---------->TaMYB80        <---------ARR11(3)           --------->ANAC58  --------->TOE2(3)         <---------KAN4(2)         --------->ARR11(3)           --------->ANAC58  --------->TOE1(3) ----->YAB1--------->KAN4(2)      --------->YAB1     --------->GLK1(2)    --------->ZAT6------->GAMYB   catcatcgaagaatataccacccaaaaaatctctaattatctttataaaaatcagtttctgaattcaaggaaaataacactaaaccgtaaccgaaatttt  22173400                                                --------->AHL20(1)       ---------->DOF2                          --------->ARR11(3)                         --------->DAG2 -------ANAC58                                  <---------AHL20(1)                <---------ANAC58 -------ANAC55(1)                             <---------AHL20(2)                  <---------ANAC58 -------ANAC46         ----------->HVH21     --------->AHL20(2)              <---------AHL20(2) -------ANAC55(2)    <---------ANAC55(2)    <---------YAB1                  --------->AHL20(2)------- ------>ANAC55(2)    --------->ANAC55(2)  --------->YAB1          <---------ARR11(3)   <------------- -------ANAC58     <---------ATHB12      --------->AHL20(2)       <---------AHL20(1)   -------------- -------GT1   >>>>>>>>>MYB2              <---------AHL20(2)       --------->AHL20(1)  ---------------   acgtgattgtaaagaaaaccaataagtgacccttgaaatttcatttattatatattgacttatttcaaaatatttctattaaatccttgccaaaaattga  22173500     <---------ARR11(1)     <-----------ARR10     <---------ARR14(2)                <---------------AtSPL8     ------->TEIL                      --------------->AtSPL8     --------->GLK1(2)                 <---------------AtSPL3     --------->ARR14(2)  <-------TEIL--------->CCA1(2)    <---------ARR14(1) --------->ARR14(2)                                        <----------DOF2 ---->GT1              <---------GLK1(2)     <---------DAG2                 --------->CCA1(2) --AGL15               <---------ARR14(2)    <----------DOF2               <---------ARR11(3) ->AGL15          --------->MYB52(1)<---------ARR11(3)                 --------->CCA1(2) -->AGL3        --------->MYB46(3)  --------->ARR11(3)        <--------P   --------->ARR11(3)   -----   taaaccgaatctagtcgaacaaacagattcgttgataagatatagtacttttttttttgtaggggttgataagataagatatactttgacatagtaaacc  22173600                                                                          <---------ICU4                                                                         --------->ICU4                                                                     <-----------TGA1                                                                    --------->TGA1a                                                                    --------->TGA2(1)                                                                    <---------TGA1a                                                                    <---------bZIP60(1)                                                                    --------->bZIP60(1)                                                                    <---------TGA2(1)                                        <---------TOE2(3)           =================================                                  --------->AHL20(1)                <---------O2                                  <---------AHL20(1)                --------->O2                                  --------->AHL20(2)                --------->ANAC55(2)                                  <---------AHL20(2)               <-----------STF1                               <---------ICU4                      ----------->STF1                               <--------HAHB4                     >>>>>>>>>>>AtbZIP1                              <---------YAB1                     ----------->HVH21                <--                            --------->YAB1                       ----------->TGA1----------------->AGL1                            --------->TOE2(3)        <-----------HVH21   <---------YAB1      <-------                         <-----------GT1<---------YAB1         <---------At4g35610--------->TOE2(3)                      <---------ICU4  <---------AHL20(2)       --------->At4g35610--------->TOE1(3)            <---------YAB1 <---------YAB1           <---------DEAR3(2)--------->TGA2(2)      --------  --------->AHL20(2)<---------MYB59   --------->AHL20(2)    <---------At5g28300<-----------GT1------- ---->TOE2(3)--------->ATHB12 --------->ICU4     <-----------HVH21<---------TGA2(2)          <-------   ttgattatatgaagatgatttgcctaattacgataattaattaatattaaacgtcggtcatttactgctgacgtcatcattttaccttagtggataaggt  22173700      <----------DOF2 ================bZIP_DOF                                                            --------->WOX13(1) -------YAB1                    --------->ANAC58                                   <---------ATHB12 --TOE1(3)                      --------->ANAC58            --------->LBD16      --------->WOX13(1) ->DAG2                  ---------->DOF2              <---------ARR11(3)  <---------ANAC46 ---->GT1               *TSS <---------GLK1(2)        --------->ARR11(3)  <---------ANAC58 --TOE2(3)             <---------ATHB12              <---------GLK1(2)    <---------ANAC58   attattctctttcttcaaaactcaaatcaaagaatcgcaactatacatttctccaaaatctccgagttctacaattgtgtgatcaatcaatcttctccga  22173800                                                             --------->HSFB2a(1)                                                             <---------HSFC1(2)                                                             --------->HSFC1(2)                                                             <---------HSFB2a(1)                                                            <---------TOE1(3)                                                            <---------TOE2(3)                                                            <---------AtMYB61                                                        <------NtERF2                                                        --------->RAP2.3(1)                                                        --------->ATERF1(1)                                                       <---------ATERF1(1)                                                       <---------ORA47(2)                                                       ------>NtERF2                                                       <---------DEAR4(2)                                                       <---------ERF1                                                       <---------RAP2.3(1)                                                      --------->DEAR3(1)                                                      <---------DEAR3(1)                                                      <---------ANAC46                                                      <---------RAP2.3(2)                                                      <---------RRTF1(3)                                                     --------->ATERF1(1)                                                     <------NtERF2                                                    ------>NtERF2                                                    <---------ATERF1(1)                                                    <---------RAP2.3(1)                                                    <---------ERF1                                                    <---------DEAR4(2)                                                    <---------RRTF1(1)                         <---------ICU4            <---------RAP2.3(2)                         --------->ATHB12          <---------DEAR3(1)                        <---------YAB1             --------->O2                        --------->ICU4            <------NtERF2   <---------ANAC58                      <---------ICU4             ------>NtERF2    <---------ANAC46               ---------->DOF2                   <---------ATERF1(1)             --------->YAB1                     ----------->HVH21--------->At4g35610       --------->ARR14(2)            ===============================HOX2a_HOX2a<---------RAP2.3(3)                  <---------ARR14(2)            ============================HOX2a_HOX2a<---------O2<--------P       <------MYB46(1)            <------ZmHOX2a(2)                   --------->ETT(2)--------->MYB111(2) --------->DAG2        --------->HSFB2a(2)                     <---------DEAR3(1)<---------ANAC58 ---------->DOF2  <        <---------HSFB2a(2)      <------ZmHOX2a(1)--------->ATERF1(1)           <------MYB83        -    <---------GLK1(2) --------->YAB1<------ZmHOX2a(1)<---------ABI4(1)        <--------P  <------ZmHOX2a(1)   tttcaagcttctcgatcaaaagaatcatcatgggaggaggaagagctatggcgacggcggcgaaggttgctggaatcggagttggtaaaggaggattcaa  22173900                                                         ------>NtERF2                                                         <---------ATERF1(1)                                                         <-----------HVH21                                                        --------->DEAR3(1)                                                        <---------ANAC46                                                        <---------DEAR3(1)                                                       <------NtERF2                                                       ------>NtERF2                                                       --------->RAP2.3(1)                                                       --------->ATERF1(1)                                                      <---------RAP2.3(1)                                                      <---------ATERF1(1)                                                      ------>NtERF2                                                     <---------RAP2.3(2)                                                     <---------DEAR3(1)                                                    <---------LBD16                                                    <------NtERF2                                                    --------->ATERF1(1)                                                    --------->At4g35610                                                    <---------At4g35610                                                    <---------ABI4(1)                                                   <---------ERF1                                                 <---------At4g35610                                                 <-------GAMYB                                                 --------->At4g35610                                                 --------->ZAT2                                                 ----------->RAV1(2)                                                 <---------ZAT2                                                 --------->ATERF1(1)                                                 <------NtERF2                                                ------>NtERF2                                                <---------ATERF1(1)                                                <---------RAP2.6(1)                                                <---------RAP2.3(1)                                                <---------MYB46(3)                                                <---------RRTF1(1)                                                <---------ERF1                                               <---------RAP2.3(3)                                               <---------RAP2.6(2)                                               <---------RAP2.3(2)                                              --------->DEAR4(2)                                              ------>NtERF2                                              <------NtERF2<---------ANAC46                                             ------>NtERF2--------->ATERF1(1)                                 <---------ZAT6--------->ATERF1(2)                               <---------ANAC58<---------ANAC46                 ----------->HVH21           <---------ATERF1(1)                 --------->DEAR3(1)          <---------RAP2.3(1)               ------>NtERF2   <---------ANAC55(2) <---------ATERF1(1)               --------->LBD16 <---------ANAC55(1) <---------RAP2.3(1)               <---------ATERF1(1)          <---------DEAR3(1)              <---------DEAR3(1) ----------->GT1<---------DEAR3(2)                              <----             <---------LBD16   --------->ANAC55(2)<---------DEAR3(1)                          <------            ------>ZmHOX2a(1)  <---------ANAC58<---------ATERF1(2)                           <-------       --------->GLK1(1)    --------->ARR14(2)--------->ATERF1(1)             --------------------->WRI1       <---------GLK1(1)    <---------ARR14(2)--------->RAP2.3(1)         <---------RAP2.6(2)<------- ---------ARR14(2)      <---------At4g35610<---------LBD16<------NtERF2--------->ARR14(2)   <-------- -------->ARR14(2)------>NtERF2<---------ANAC46<---------DEAR3(1)      <---------ARR14(2)<---------DEAR3(1)   gggatttggatttcctccggcgactgagcagtttcgtgttaaaaccgcggcggctgcggcgtcgtctaaaccggtttcggcttcgattacatcggcggtt  22174000      <-------GAMYB                                         --------->At4g35610       <---------MYB46(3)     <-----------RAV1(1)                                --------->ARR14(2)           <--------P  ------>ZmHOX2a(1)                                     <---------ARR14(2)          <-------GAMYB ---TEIL                                                ---------->TaMYB80       <---------TOE1(2) -GAMYB                                           <---------WOX13(1)       <---------GLK1(2) --MYB46(3)                                     --------->ATHB12      --------->ARR14(2) --DEAR3(2)           <---------YAB1           --------->ICU4         <---------ARR14(2) -DEAR3(1)            --------->ICU4           <---------YAB1      >>>>>>>>>TBF1------>ZmHOX2a(1)   catccttctgttgaagaagatgggatgattatgcagagaccggtttgggatgattgggaatttgctgaagaagaaccgattcctagggttgtttttagca  22174100                                                     <---------AHL20(2)                                                    --------->AHL20(2)                                                    <---------AHL20(2)                                                 --------->WOX13(1)                                         ---------->DOF2                                      ------>ZmHOX2a(2)                                     <------ZmHOX2a(2)                                    <---------ARR14(3)                                    --------->ARR14(3)                                    --------->ARR11(3)                  ------>ZmHOX2a(1)                                    <---------AGP1  <---------AHL20(1) --------->TOE2(3)                                    <---------ARR14(2)                --------->YAB1                -                          <---------HSFC1(2)  --------->ANAC58      <-----------GT1                 <                    ---------->DOF2 --------->ARR14(2)            <---------AHL20(2)               <-                 --------->At4g35610<---------ARR11(3)         <---------ARR11(3)                <---    ------>ZmHOX2a(1)     --------->HSFC1(2)  --------->ANAC58 --------->ARR11(3)           ---------   aacctcctagtcttgaagaagctaaagaagctactgaagatcttaaagaagcaattaatttgtaagattttatcctaatttgtgttcttgagagaatttg  22174200  Previous    Next  AGI:  At5g54540.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G25170.1); similar to unknown [Populus trichocarpa] (GB:ABK93511.1); contains InterPro domain Uncharacterised conserved protein UCP012943 (InterPro:IPR016606) Range:  from: 22173724    to: 22175280    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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