Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           <---------ZAT14                                                                   --------->SPL7                                                                 <---------SPL7                                                                <---------ANAC58                                      --------->ICU4            <---------ANAC58                                --------------->AtSPL3         <-------TEIL----------->GT1                                --------------->AtSPL8    --------->AHL20(2)           --------->AHL20(2)   <---------------AtSPL8    <---------AHL20(2)      ---------->DOF2           <---------AHL20(2)  --------->YAB1          --------->AHL20(2)--------->REM1(2)     ------    <---------AtLEC2          --------->ICU4          --------->AHL20(2)--------->ALFIN1       ------ ----------DOF2----------->GT1<---------ATHB12    --------->AHL20(2)  <---------ANAC46      <--------   tactttccatgaattaattgttaaaaaaaacaatgatgtactaattctcaaaaaaaataaaaaaattcgtacgcgtgtagttaaaaaagccttcatacct  22169600                                                                                  <---------AHL20(2)                                                                                  --------->AHL20(2)                                                                                 --------->AHL20(2)                                                                                 <---------AHL20(2)                                                                                 --------->YAB1                                                                             --------->AHL20(2)                                                                             <---------AHL20(2)                                                                           --------->TOE2(3)                                                                          -------->ATHB1                                                                          --------->YAB1                                                                          --------->ATHB12      <---------AtMYB61                        --------->TOE2(3)          <--------HAHB4    <----------DOF2                            <---------MYB59            <---------ICU4 --->TOE2(3)                            <---------YAB1                   <---------ATHB12 --->TOE1(3)<---------WOX13(1)     ----------->GT1                       --------->ICU4 -CCA1(2)   <---------YAB1   <-------TEIL   <-----------GT1            --------->WOX13(1)          --   tatatgctttggtgattaatacacatttgcatacatatagttataaataccttattttctaaattagacacttcaatcattaattaaaattttctcagtt  22169700                       --------->AtMYB61                       <---------ALFIN1                      --------->MYB46(3)                      <---------ATHB12       <---------ALFIN1                      <---------MYB55(2)  <-----------GT1                     ------>MYB46(1)    <-----------GT1                     -------->P      --------->ATHB51             <---------ANAC58        <---------ICU4        <---------YAB1             <---------ANAC46       --------->ICU4      <---------AHL20(2)               <-----------GT1             <---------ANAC58       <---------YAB1      --------->AHL20(2)             <---------ICU4   ========================================================MADS_MADS          ------>ZmHOX2a(2)   <-----------------AGL2        ---------->ID1 ------->MYC3  <---------HSFB2a(2)    <---------AHL20(2)   <-----------------AGL3   <----------DOF2<---------------AGL15    --------->GLK1(2)<---------AHL20(1) -------->DOF2       ------>MYB83<---------YAB1 <-------MYC3  --------->HSFB2a(2)   --------->YAB1   ttaaagctaattttggtgtgtccaaccactcttttgtcattatttctccacatggaatttttttatagaaattctatcgatcgctataatatttccattt  22169800                                                                                        --------->ANAC58                                                                                        --------->ANAC55(1)                                                                                        --------->ANAC58                                                                                        <---------ANAC55(2)                                                                                        --------->ANAC46                                                                                        <<<<<<<<<<HY5                                                                                        --------->ANAC55(2)                                                                                       <-----------STF1                                                                                     <---------ARR14(2)                                                                            <-----------RAV1(2)                                                                           --------->MYB46(3)                                                                          ------>MYB83 <-------TEIL                                                                          ------>MYB46(1)                                               --------->AHL20(2)         -------->P --------->ARR14(2)                                               --------->YAB1           --------->MYB46(3)                                         <---------ARR11(3)             <---------MYB111(1)                                --------->ANAC55(2)       --------->PCF2<---------MYB55(2)                                <---------ANAC55(2)----------->TBP      --------->AtMYB61<-----------TGA1                           --------->YAB1--------->ARR14(2)             <---------MYB111(2)                        <----------DOF2 <---------CCA1(2) --------->PCF5--------->DEAR3(1)                        --------->TOE2(3)<---------ARR11(1) <------NtERF2--------->MYB55(1)        <-                      ------->TEIL <-----------GT1 <---------AHL20(2)   <---------MYB46(2)--------->TGA2(2)              <-----------------------TaNAC69(2)<---------AHL20(2)     --------->MYB46(3)<-----------HVH21   tctctaaaaatttagaaacttatgaactttaatcacttaaccatatctattatatatatggccccattcactcaccaaccaggggcaaatacgtcattcc  22169900                          ------>ZmHOX2a(1)                      <---------ARR14(2)                      <---------ARR14(3)                      <---------GLK1(2)                      --------->ARR14(2)                      --------->ARR14(3)                      --------->ARR11(3)                      <---------ARR11(3)             <---------------AGL15                 *TSS            ----------------->AGL3                --------->LBD16         <----------DOF2------>ZmHOX2a(2)         --------->At5g28300      ------>ZmHOX2a(1)<------ZmHOX2a(2)         <---------ANAC46      =========================HOX2a_HOX2a    --------->DEAR3(1)                                   --      ========================HOX2a_HOX2a  <---------ICU4               <----------DOF2            -- --------DAG2--------------->AGL15         --------->YAB1       <----------DOF2                  ----   accttctccttctttcccatttaagatcctccctcttcacttgaatcatcgccgtgaaaaaaaaaactttctctctttctctctctctctctctcagtga  22170000                                                                                     --------->MYB46(3)                                                                                   ------>MYB83                                                                                   ------>MYB46(1)                                                                                   --------->MYB52(1)                                                                                  --------->MYB55(1)                                                                                 <---------MYB55(2)                                                                                 --------->MYB46(3)                                                                                 <---------MYB59                                                                                --------->ANAC58                               ------>ZmHOX2a(1)                                --------->ANAC58                             ===============HOX2a_HOX2a                         --------->ANAC46                             ------>ZmHOX2a(2)   --------->LBD16               --------->SPL7                           <---------ARR11(3)    ------>NtERF2               <---------SPL7                           --------->ARR11(3)   --------->DEAR3(1)         <------NtERF2                        --------->SPL7          --------->ANAC46          <-----------HVH21                      --------->LBD16    <---------ALFIN1                 ------>NtERF2  <---------WRKY12 ------->ANAC58      <---------ANAC46   --------->MYB46(3)            --------->ANAC46   <---------WRKY38(1) ------->ANAC58 --------->At4g35610   --------->ANAC46               ------>ZmHOX2a(1)------->GAMYB ------>DOF2    <---------At4g35610  ------>ZmHOX2a(1)  <----------DOF2  --------->DEAR3(1) ---------   aaagctatgaacaaactcatctcccgtatgatccttctcctcaccactctccgcctctctttatccctctcctcgccgtcgtacccaacggtccacgacg  22170100                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                -----                                                                                               ------                                                                                               <-----                                                                                              <------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                             <-------                                                                                            <------NtERF2                                                                                            ---------                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                            ---------                           <----------DOF2                                                  ------>NtERF2                       <------NtERF2                                                        ---------                      --------->LBD16                                                       ---------                   --------->LBD16                                                         <---------ATERF1(1)                   ------>NtERF2                                                           <---------ORA47(2)                 <---------LBD16                                                           <---------ERF1            <---------ARR11(3)             <-------TEIL                                    <---------RAP2.3(1)            <---------ARR14(3)   --------------->AGL15                                    <---------DEAR3(1)            --------->ARR14(3)   --------->TOE2(3)                         <---------HSFB2a(2)<------      --------->YAB1<------NtERF2<---------------AGL15                     --------->HSFB2a(2)------>NtERF2     <------ZmHOX2a(2)------>NtERF2       <--------P             ------->GAMYB           <---------LBD16 >ANAC46    --------->ARR11(3)  ----------------->AG            --------->MYB46(3)     ------>ZmHOX2a(1)   ttctccgatcagaaggtctcccggcgggacttttacctcaagaggttgattcttatattcttcacaacgacggtcgtctcgaggttttcctcgcggcgcc  22170200   --------->ANAC58   --------->ANAC58 -----ANAC58 -----ANAC46                   ---------->DOF2 -----ANAC58                   ================================================bZIP_DOF ---->DEAR3(1)              <----------DOF2 --->ATERF1(1)          <-------TEIL -NtERF2                <---------ZAT14 ---ATERF1(1)           --------->ZAT18 ->RRTF1(3)             <---------ZAT18 ->RAP2.3(2)            --------->ZAT14 ->DEAR3(1)           <-------MYC3                 --------->At4g35610    <------NtERF2 --DEAR3(1)           ------->MYC3                <-----------ARR10     <---------DEAR3(1) >RRTF1(1)            ------->MYC4                --------->GLK1(2)  <---------O2 >DEAR4(2)            ------->PIF5                <---------ARR14(2) <---------TGA1a -ABI4(2)             <-------PIF5                --------->ARR14(2) --------->O2 >RAP2.6(1)           <-------MYC2               <---------GLK1(1)   ================================ >ATERF1(1)           ------->MYC2      <---------SPL7               --------->TGA1a >ERF1              ------->TEIL      <------NtERF2<---------At4g35610<-----------HVH21             < >RAP2.3(1)  <---------HSFB2a(2)     <---------RAP2.6(3)          --------->ATERF1(1)               - ---RAP2.3(1)--------->HSFB2a(2)    --------->DEAR3(1)    --------->CCA1(2)                   -------   gtgttacgctaaattcgagacgaacgtgcactttgaagccgtcgtaagagggaatctgagctatgggagcctcgtcggagtagaagggctatcgcaaaaa  22170300                                                      ------>NtERF2                                                      <-----------HVH21                                                      <-----------TGA1                                                     --------->bZIP60(1)                                                    --------->RAP2.3(1)                          --------->GLK1(1)        --------->LBD16                         <---------ARR11(3)        ------>NtERF2                 <---------At4g35610    --------->GLK1(2)                 --------->At4g35610    --------->ARR14(2)                      <----------DOF2            <---------ANAC58            <---------ARR14(2)                     <---------ANAC46       ====================RAV      --------->HSFB2a(2)      <---------YAB1    <---------ANAC58       <-----------RAV1(1)<---------GLK1(1)       <---------RAP2.6(2)          <---------ANAC58  <--- ====bZIP_DOF  <-----------RAV1(2)<------NtERF2  <---------LBD16            <<<<<<<<<MYB2  <--------- ---------ARR11(3)       --------->ARR11(3)    --------->GLK1(2)           <-------GAMYB --------->At4g35610 -------->ARR11(3) ----------->HVH21<---------HSFB2a(2)<------NtERF2      <---------DEAR3(1)     <--- --->DOF2   <---------ANAC58    <---------DEAR3(1)<---------LBD16   <---------GLK1(1)<-----------GT1   gagctcttcttgtggcttcaggtgaaagatatcgtcgtcgagaatccaaattccggcgtcattgtgtttgatatcggcgttgcttttaaacagctttcgc  22170400                                         --------->AHL20(2)                   <---------AHL20(1)                                         <---------AHL20(2)                   --------->AHL20(1)                                    --------->At5g28300                       <---------AHL20(2)                                   ----------->GT1                            --------->AHL20(2)                             ----------->RAV1(2)                 <---------AHL20(2)            --------->ARR11(3)   --------->RAP2.6(3)            <---------AHL20(2)     <----------DOF2   <---------ZAT6   --------->ICU4          --------->AHL20(2) -------DOF2--------->ARR14(2)  --------->MYB52(1)              <---------AHL20(1)         <--------- -DOF2      <---------ARR11(3) ----------->HVH21       --------->ANAC46   <---------AHL20(2) ------DAG2 <---------ARR14(2) ----------->TGA1      --------->ZAT6       --------->AHL20(2)     <---   tttctctctttgaagaccctcccaagtgtaaacctgacggtaattttttggattaacacaaaacaatttttttggtttaattaattagtttttaaactgt  22170500  Previous    Next  AGI:  At5g54530.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G61667.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39087.1); contains InterPro domain Protein of unknown function DUF538 (InterPro:IPR007493) Range:  from: 22169951    to: 22171655    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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