Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         --------->AHL20(2)                                      <-----       ---------->DOF2            --------->LBD16                                             -------     <---------YAB1               ----------->GT1                                    <---------GLK1(2)  <------ZmHOX2a(2)              <---------HSFB2a(2)                                 --------->ARR14(2) --------->ARR11(3)             <---------LBD16                                      <---------ARR11(3) <---------ARR11(3)            <---------LBD16                                       --------->ARR11(3) -------->GLK1(1)          <---------ATHB12                                          <---------ARR14(2)   agagatcatcaaagagaaattaagaacgaatcactcgggaaaaaaatatcaaattggtttgtgttttagtttctctctaagtttggagattttctataat  22081800                                                                   <---------MYB52(1)                                                             <---------AtMYB61                <-----------GT1                           <---------ANAC46            --------->ATHB51           <---------YAB1                                 <---------ANAC58            --------->ATHB12        <---------YAB1                                    <---------ANAC58            <---------ICU4       <---------AHL20(2)                              <---------MYB52(1)            --------->ICU4     <---------YAB1                             ---------->DOF2   <-------GAMYB      <---------YAB1   <---------AHL20(2)                         ------>ZmHOX2a(1)  ----------->GT1   <---------ICU4  <---------AHL20(2)   --------->ATHB12      --------->TOE2(3)   <---------MYB46(3)--------->YAB1 ----TOE2(3)  <---------YAB1              <---------GLK1(1)<----------DOF2     <---------ALFIN1 -->YAB1<---------AHL20(2)         --------->ALFIN1  <---------MYB46(3)      ----------->RAV1(1)   gttttttatttttattattaacgagtcatttgaaagagtgttggattcctcaaagtcgttgctttggtcgttaatatcgcaacactcattatttgttgtg  22081900                   <------------CBF                 <---------YAB1                                                         --------->AHL20(2)                --------->YAB1                                                          <---------AHL20(2)             --------->TOE2(3)                <---------ICU4                           <---------AHL20(2)             <----------DOF2                  --------->ATHB12                         --------->AHL20(2)        --------->At4g35610                   --------->YAB1                           --------->YAB1        <---------At4g35610                  <---------ATHB12                    ----------->GT1       --------->MYB59        <---------AHL20(2)       ---------->DOF2           ------>ZmHOX2a(2)     <---------MYB52(1) ----------->RAV1(1)  --------->ICU4 ------------>CBF     --------->YAB1   agttttagttagctactttaatattgcaacatttttttggaaatgaaatcatgggggaaaagaacaattactgaagggtttgatcgtaattaaaatgaaa  22082000                    <----------DOF2                 <---------ARR11(3)                 --------->ARR11(3)                 <---------AGP1                 <---------ARR14(2)                 --------->ARR14(2)                <---------CCA1(2)            <-------GAMYB           <---------ANAC58                                 <-----------GT1      --------->ANAC58           <---------ANAC58                                 --------->YAB1     ---------->DOF2           <---------ANAC46    <---------ZAT6     <---------ICU4  <----------DOF2--------->ANAC58       <------------CBF   <---------AHL20(2)      --------->YAB1  --------->TOE2(3)      <---------HSFB2a(2)     <---------YAB1------>ZmHOX2a(2) <---------ZAT6  <-----------HVH21        --------->AtMYB61     <---------TOE2(3)  <-----------TBP          <---------ATHB12 --------->TOE1(3)     ----------->GT1   tctaattaagattgcgttggatctttatttatagagatagtgttgaatcaaatcatgtcaaatcacaactttaaacagaaccaaagcaaatcgagaaaat  22082100                                                         --------->YAB1                                                      <----------DOF2        ----------->HVH21                           <---------ICU4      <---------At4g35610                        --------->YAB1                           <----------DOF2  <---------ARR14(2)                   <---------TOE2(3) --------->TOE2(3)        ------>NtERF2------  --------->ARR14(2)      <---------AHL20(2)----------->GT1         --------->TOE2(3)    <---------AtLEC2   ttcggttctactgaccgcataaacttatttattcttcaactagggtttgtataatactttcttaatctaatctaaatctcttgcagcctttgcatttcgg  22082200                                                                                  ------>ZmHOX2a(2)                                                                                <---------ARR14(3)                                                                                <---------ARR14(2)                                                                                --------->ARR14(3)                                                                                --------->ARR14(2)                                                                                --------->ARR11(3)                                                                                <---------GLK1(2)                                                                              ----------->ARR10                                                                            <--------P                                                                         <---------ZAT6                                                                     <---------ZAT14                                     --------->TOE2(3)            ----------------->AGL1                                   ------>MYB46(1)                <-----------------AGL1 --------->At4g35610                <---------CCA1(2)  -------->P                 ===========================HOX2a_HOX2a               ------->TEIL        ------>MYB83               ==========================HOX2a_HOX2a            --------->ANAC58     --------->AtMYB61            <------ZmHOX2a(1) <---------ARR11(3)    <---------ARR11(3) <---------At4g35610  <---------At4g35610 <---------GLK1(1)<------ZmHOX2a(2)  < ----->GT1  --------->ANAC58    --------->MYB46(3)    <----------DOF2--------->ZAT14------>ZmHOX2a(1)   taacaacatctcttacgcatgtctctgcttctaaaccaacctttgaagctactatgctttcggaggaaacctgtactggtaagatcctctctgatgcaaa  22082300                                                                                           ----------                                                                                     <---------AtLEC2                                                                                     <---------ANAC46                                                                                     <---------ANAC58                                                                                     <---------ANAC58                                                                                  <-------PIF5                                                --------->LBD16                   ------->PIF5                  <------NtERF2               <---------LBD16                --------->ANAC58                 ------>NtERF2     --------->At4g35610            <---------YAB1------->TEIL                 <---------RAP2.3(1)         <---------LBD16    --------->YAB1 <---------ALFIN1  ----            <---------ATHB12       <---------ZAT2              --------->ICU4--------->ANAC46    ---- ---------ALFIN1<---------DEAR3(1) <---------At4g35610         <---------YAB1--------->ANAC58    <---   cccctccttgttcaatcgtcggcgttcaaccttgtggagctgatcatctcgggagactcgatgttatgatgatgtctcgacgcacttgcttggaaaagaa  22082400                                                             <---------At4g35610                                                            --------->MYB111(1)                                                         <---------ANAC58               --------->ZAT18                           <------MYB46(1)               <---------ZAT14                           <---------ANAC58               --------->ZAT14                           <---------ANAC46            <------MYB83                                 <------MYB83            <------MYB46(1)                             <---------MYB46(3)           <---------MYB46(3)                           <------MYB46(1)           --------->MYB111(1)                          --------->MYB111(1)           --------->ALFIN1            ------>ZmHOX2a(2)--------->MYB59                 <---------ANAC58           <---------AtMYB61          <------ZmHOX2a(2) --------->MYB55(2)              <---------ANAC46          <--------P                 <---------ARR14(2) <------MYB83                    <---------ANAC58 >DOF2  <---------ZAT6              ------->GAMYB   --------->ATHB12            --------->At5g28300 ----->HSFC1(2)<---------ZAT18     --------->MYB46(3) <--------P  <----------DOF2       <---------ANAC55(2) ----->HSFB2a(1)         ------>ZmHOX2a(2)<-----------HVH21<--------P          ----------->GT1 ------HSFB2a(1) <---------ZAT14 <---------DOF5.7(2)<---------MYB46(3)   <------ZmHOX2a(1)         <-   ggtgcctctagagttggtgcacagtgatcccatggtaacgatcgggtcatcccatggttgggtagctactttgaaggacgacggtatattgcgtctccaa  22082500                         --------->ANAC58                       --------->CCA1(2)                      <---------ARR14(2)                  <---------At4g35610            <---------ZAT2          --------->ANAC46            --------->At4g35610     --------->ANAC58            --------->ZAT2          --------->ANAC58           <---------ATERF1(1)--------->TOE1(3)                      <---------ALFIN1           --------->LBD16    --------->TOE2(3)              --------->ZAT6         <---------LBD16 --------->ANAC58                  <-----------GT1      <-----------GT1 --------->ARR14(2)             ------>ZmHOX2a(1)                 <-----------TGA1 --------YAB1  <------NtERF2------->TEIL          ------>NtERF2  ------>NtERF2         <-----------HVH21   gatgattttaacccggctgcatcggatacgaaccctaaacgcattcccttgcctcctcttgtaactctgccccattgccaaactcaaatcgtcaccaatg  22082600                                     =============================================bZIP_DOF                                     --------->O2                                     <---------O2 <---------ARR11(3)                                     <---------ANAC58                  <----------DOF2                                     <---------ANAC46           --------->At4g35610                                     <---------ANAC58           <---------ZAT2            --------->TOE2(3)                             <------ZmHOX2a(1)    --------->ARR11(3) <---------At4g35610 --------->ANAC46                    --------->LBD16  <---------bZIP60(2)        --------->ZAT2     <---------At4g35610                   --------->LBD16   <---------TGA1a        --------->AtMYB61      --------->At4g35610                 <---------LBD16   <-----------HVH21     <------ZmHOX2a(1)         --------->ZAT2    <---------ARR11(3) <------ZmHOX2a(1)    <-----------HVH21   <---------At4g35610<---------ZAT2   tgtcaatgtcttcatcttctcccgaggatgaggactgtgtcgtggctgtcaagttcttaggacctcagctcagcttttgcagaccagctcaacgtaaacc  22082700  Previous    Next  AGI:  At5g54330.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G54320.1); contains InterPro domain Protein of unknown function DUF295 (InterPro:IPR005174) Range:  from: 22082219    to: 22083289    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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