Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  --------->ANAC46                                             ------>ZmHOX2a(2)           -------->HAHB4                    ===========================HOX2a_HOX2a           <--------ATHB1                    ======================HOX2a_HOX2a           --------->YAB1                    ====================================HOX2a_HOX2a           <---------ICU4                  --------->ARR14(2)          --------->ICU4                   <---------ARR14(2)          <---------ATHB51                <------ZmHOX2a(1)      ------>ZmHOX2a(1)                 <-   <---------YAB1                     --------->CCA1(2) --------->ARR14(2)                       <--- -->ATHB12<---------YAB1             --------->ARR11(3) <---------ARR14(2)<------ZmHOX2a(1)      ==== --YAB1 --------->YAB1  <---------ATHB12<---------TOE2(3)   ------>ZmHOX2a(1)              <---------TOE2(3)   tgctgatgaataataattctagctcaatcgatcgaagaagataaggatcgacgatacaaatcctctcctaactagaggaaaccgaagaaaatgaaggaag  22078100                                                         ------>MYB46(1)               --------->ZAT2                 <------ZmHOX2a(2)       --------->ARR11(3)       --------->AHL20(1)---------->DOF2          --------->ZAT18        <------ZmHOX2a(2)       ------>MYB83         <---------ARR14(2) <---------ZAT2 --------->ARR14(2)       <---------AHL20(1)      --------->AHL20(2)--------->ANAC46 --------->At4g35610            <---------ARR11(3)     ------->GAMYB          --------->ARR14(2) <---------At4g35610            --------->ARR11(3)     <---------MYB59  --------->bZIP60(1)         - --------GLK1(1)<---------ARR14(2)    --------->YAB1 --------->ANAC58   <---------ETT(2)            - ---ZmHOX2a(1)  --------->AGP1<---------YAB1         --------->ANAC58   <----------ID1 <---------ZAT2 =======================HOX2a_HOX2a  <------ZmHOX2a(2)--------->MYB46(3)<---------bZIP60(1)         <   gatagctgctaatgcacagatccaatcgaattaagatcgatcatatattgttggcaaccaaattcaaatatatgacgacaaatccacaaagctcggagaa  22078200                                                                                                    -                                                  ------>NtERF2                                   >>>                                                  <------NtERF2             <---------ANAC58  -------                                                 --------->LBD16            <---------ANAC58  <------           --------->ARR14(2)                   <---------ANAC58        <---------MYB52(1)   <------NtERF2           --------->GLK1(2)                    <---------ANAC46      <---------O2         <---------ANAC46           <---------ARR14(2)                   <---------ANAC58      ==================bZIP_DOF-----          <---------GLK1(2)            <----------DOF2                <---------TGA1a      <---------ANAC58 -------->AHL20(1)  <-------TEIL       =========================================bZIP_DOF   <---------ANAC58 -------->AHL20(2) --------->CCA1(2)<---------ARR11(3)         ------>ZmHOX2a(1)          <---------LBD16 ---------AHL20(2) --------->GLK1(2)--------->ARR11(3)    <---------At4g35610<----------DOF2<--------   aataaaataagagaatctgagattcgagattagagagagacctttctatggcgggcattaagctccttagagacgttggctttctcgttcatggcggata  22078300                                                                         ----------->GT1                                                                   ----------->HVH21       ---------->DOF2                                            --------->ATERF1(1)              --     --------->YAB1                                         <---------LBD16                        <- -------->AHL20(2)       ---------->DOF2                  ------>ZmHOX2a(2)                      ---- >>>>>>GATA-1     --------->GLK1(2)>>>>>>>>>TBF1        <---------ARR11(3)                     <----- -->ARR14(2)      <---------ARR14(2)      --------->At4g35610    <---------ATERF1(1)        --------- ---ARR14(2)      --------->ARR14(2)      <---------At4g35610--------->ANAC46               ------>NtERF2 ------>GT1   <------ZmHOX2a(1)==================================HOX2a_HOX2a              <---------LBD16 -MYB46(3)   ----------->GT1   <------ZmHOX2a(1)        --------->ARR11(3)            <----------DOF2   gataaaatcaaaagaaggagaatcggagaaagaggaagaagaagagctgaagaaaaatgatctacggagacgacgaggtcaaaatagtcttttccgcctt  22078400                                                         <----------DOF2           --------->ARR11(3)                         <-----------GT1 <---------ZAT18                              --------->ARR11(3) ------->At4g35610                            <---------ARR11(3) --------At4g35610                       --------->AHL20(2)                 ----------->HVH21    ---- ------>CDC5                       --------->LBD16------>ZmHOX2a(1)      --------->TOE1(2)      *TSS ------HVH21            <<<<<<<<<TBF1    <---------AHL20(2)     <----------DOF2                ------ >LBD16    <---------ARR11(3) ------>ZmHOX2a(1)   <----------DOF2  --------->HSFB2a(2)     --------->CCA1(2)   cagcgctcttcaatatctctctcttcttcttcctctccgaaaattaaaaatccttttttctttgccctttgagaacgagcgaccaagagagagagatggg  22078500                                                                                <------MYB83                                                                                ----------->GT1                        <---------TOE2(3)   --------->LBD16                     <------MYB46(1)    <----------DOF2     <---------------AtSPL8                                 --------->MYB59    <---------DAG2      <---------YAB1    <---------LBD16                 <---------------AtSPL8 -------->CBF       <---------GLK1(2)<---------YAB1               <------------CBF  <---------AHL20(2) ----->GT1       <-----------------AGL1  XXXXXXXXXXXXXXXXXXXX>MIR826--------->AHL20(2)              -   tcaatactttttggaccgttcagattatggtactggtttattaatccggttttagatttcattttcaaaattgaatatggttcggtttaatttcatttcg  22078600                                        ----------->RAV1(2)                     <-----------HVH21  --------->At4g35610              <---------AHL20(2)      <---------ALFIN1              --------->AHL20(2)<---------WOX13(1)              <---------ATHB51--------->ATHB12                                                  <----            --------->YAB1   <---------YAB1          ---------->DOF2   ------->TEIL       --------->YAB1 -------->AHL20(2) --------->MYB59   <---------At4g35610  --------->GLK1(1)     ---------->DOF2------   gtttaaattttcaaaaataattcggtcactcgtgattgcagcacctgaaaattttcaaagaaatctacacatgaatatttgtgaaagtgtaatcatataa  22078700                                                             <----------DOF2                                               <------MYB46(1)                                               <------MYB83 <-------GAMYB                                               <---------DEAR3(2)                                               <---------MYB46(3)                                               ----------->GT1                   <------MYB83                                              <---------DEAR3(1)    ----------->GT1                                          --------->MYB59 <---------ANAC46       <------MYB46(1) ----------->GT1          <---------YAB1  <---------TOE2(3)<---------MYB46(3)  <---------WOX13(1) -----AHL20(2)       <------MYB83 --------->YAB1          <---------DEAR3(1)<---------YAB1 --->AHL20(2)        <------MYB46(1)  --------->YAB1      <---------RAP2.6(2)--------->ATHB12 <------   aattggttaatttgtgactaagtgggttttgatttatcaaaaataaggtcggtttatttggcggtttaagtggtttttttgattggtcatatataagcat  22078800                   --------->AHL20(2)                   <---------AHL20(2)            ----------->GT1                                             <---------MYB46(3)           --------->ALFIN1                                             --------->MYB55(2)        <---------MYB46(3)                                              --------->MYB111(2)       <---------ANAC46                                              <---------MYB46(3)       <---------ANAC58                                <---------ARR14(2)       <---------ANAC55(1)                             ------->TEIL --------->ALFIN1       <---------ANAC58                                --------->ARR14(2)<-------GAMYB      <---------LBD16                                 <---------CCA1(2)<--------P  <-----------RAV1(1)                        <---------MYB52(1)     <---------AtMYB61        <-------  --------->ALFIN1--------->AHL20(2)        <-----------HVH21     <---------ANAC46        <---------ARR11(3) ---ICU4--------->LBD16  <---------O2    ----------->RAV1(2) <----------DOF2    --------->ICU4     <-   tagagtgttgcgggtggaaaataaatcacatggccatctcatcacctgttatgtctgtatccactttggagtggttgttgtattgattccaatttctttg  22078900                                                                                  ------>MYB46(1)                                                                                 ----------->RAV1(1)                                                                               <---------MYB55(2)                                                                               --------->MYB46(3)                                                                               <---------MYB52(2)                                                                               <---------ATHB12                                                                              ------>MYB46(1)                                                                              ------>MYB83                                                                              --------->ANAC58                                                                              --------->ANAC46                                                                              -------->P                                                                              --------->ANAC58                                                                        --------->KAN4(2)                                                                       --------->HSFB2a(1)                                                                       <---------HSFC1(2)                                                                       <---------HSFB2a(1)                                                                       <---------KAN4(1)                                            <---------AHL20(2)         --------->HSFC1(2)                                           <---------YAB1              --------->KAN4(1)                                        <---------RVE1(1)          --------->MYB46(3)                                       --------->ARR11(3)        <XXXXXXXXXXXXXXXXXXXXMIR779.2                                       <---------GLK1(2)         <---------DOF5.7(2)                                       <---------ARR11(3)        --------->MYB52(1)          --------->ICU4             <---------TOE2(3)          <---------WRKY12------->GAMYB          <---------YAB1             ----------->ARR10          <---------WRKY38(1)     --------->ANAC55(2)   <---------AHL20(1)                   <---------WRKY45--------->AtMYB61 ---DOF2  <---------ANAC46 --------->AHL20(2)        ----------->HVH21<---------KAN4(2)          <--- --------AHL20(2)          <---------AHL20(2)        ----------->TGA1 ------->TEIL------>MYB83  -----   tttatttatgtgatgtttatgggacatattttatttgctaagatttttatttgatgtgacgatgagtcaacgaatgttccaaccaacacaaatttcaatt  22079000  Previous    Next  AGI:  At5g54310.1    Description:  AGD5 (ARF-GAP DOMAIN 5); DNA binding. similar to AGD15 (ARF-GAP DOMAIN 15), DNA binding [Arabidopsis thaliana] (TAIR:AT3G17660.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39208.1); contains InterPro domain Arf GTPase activating protein; (InterPro:IPR001164) Range:  from: 22074278    to: 22078496    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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