Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    <-----------GT1                             <----------DOF2                          ------->TEIL                          <---------ARR11(1)            --------->ANAC58                   <---------YAB1                         <---------CCA1(2)         --------->ANAC46            <---------WOX13(1)  <-                        --------->LBD16        --------->CCA1(2)             --------->ATHB12      <-                       --------->ANAC58     <---------TOE2(3)                <---------ICU4<---------AHL20(2)                       --------->ANAC58     <---------YAB1                  --------->ICU4--------->AHL20(2)                       --------->ANAC46     <---------TOE1(3)               <---------YAB1<---------AHL20(2)                      <---------LBD16  <----------DOF2  --------->ANAC58  --------->YAB1 --------->YAB1             --------->REM1(1)   <-----------GT1<-------TEIL        --------->YAB1   <---------AHL20(2)   cgtccatcgcaatctacaactcttcccgcatctttttaacccttttaagattcacaccaagaaaaacgaataagaaccatgattgttttaattttaattc  22034800                            --------->ATHB51                            <---------ICU4                           <---------YAB1                           --------->ICU4                         <---------ICU4                         <--------HAHB4                         --------->YAB1                        --------->ICU4                        <---------ATHB12                        <---------YAB1            ------>ZmHOX2a(2)                                                     --------->At4g35610          --------->ARR11(3)--------->ATHB12                        <------ZmHOX2a(1)          <---------ARR11(3)<--------HAHB4          --------->TOE2(3)     --------->ARR11(3)   --------->WRKY12   --------->YAB1               ----------->GT1<---------TOE2(2)  --------->DOF5.7(2)<---------YAB1                --------->ANAC46--------->ANAC58 --------->TOE1(3) --------->YAB1  <---------AHL20(2)           --------->TOE1(2) <---------At4g35610 --------TOE1(3)  <---------YAB1----------->GT1   <---------TOE2(3)--------->ANAC58       <------ZmHOX2a(1) --------TOE2(3)--------->YAB1<---------YAB1 --------->YAB1  ---------->DOF2  <---------REM1(1)   taacgttgacatgatctagcatgataatcattattagtaaattttaaacataaacgtaaaacaaaacgcaggaaaacatattgtagctgataggatttag  22034900                                                                   <------NtERF2                                                                   ----------->HVH21                                                                 --------->LBD16                                                                 <---------LBD16                                 <---------At5g28300             --------->ETT(1)                          <------MYB46(1)                       <---------LBD16                          <------MYB83                 --------->ANAC58                     <---------TOE2(3)                 --------->ANAC58<---------ANAC58                     <---------TOE1(3)                 --------->ANAC46<---------ANAC58                  <---------MYB52(1)--------->LBD16   <-------TEIL--------->LBD16                <---------ANAC58 --------->MYB52(1)   --------->SPL7<---------PCF5       --------->TOE2(2)                <---------ANAC58<-----------GT1     <---------SPL7------>NtERF2          --------->TOE1(2)               <-------TEIL<------ZmHOX2a(1)      <---------------AtSPL8   <---------ANAC58           <-------TEIL <--------P<---------LBD16 <---------------AtSPL3   <---------ANAC58     <----   ctatttgtatatatacatgcgttagggtaggaatttaccggcgttcttgggaagggtacgccatttgccgggaccgtgcgtttgaatatagcctacgagc  22035000                                                             <-----------GT1                                                          <---------ARR14(2)                                                          --------->ARR14(2)                                                          <-----------ARR10                                                          <---------GLK1(2)                                                          --------->ARR11(3)                                                  <---------ZAT2                                        <----------DOF2   <---------ARR14(3)            --------->LBD16         <---------ZAT14       --------->ARR14(3)          <---------LBD16           --------->ZAT14       <---------ARR11(3)         ------>ZmHOX2a(1)        --------->ANAC46--------->ZAT2     <----------DOF2 -----GLK1(2)             <----------DOF2    ------>ZmHOX2a(1)<-----------GT1 ----------->GT1   ttctcgtcttcctccggagtccatggccctttcttcacttcactttcctccgagcttgaagattttcccatctttttcaaatgttatatgtgagagaact  22035100                                                                                                -----                                                                                                -----                                                                                                -----                                                                                                -----                                                                                             <-------TEIL                                                                        ------->TEIL     <-----------                                                              <---------YAB1         <---------AHL20(2)                                                            --------->YAB1         <-----------TBP                                                           *TSS--------->ATHB12    --------->AHL20(2)                    --------->HSFB2a(2)             <XXXXXXXXXXXXXXXXXXXXMIR1888  <---------AHL20(1)                 <----------DOF2             <------MYB83  --------->ICU4         --------->AHL20(1)      --------->GLK1(2)--------->ARR11(3)    <------MYB46(1)<---------ICU4       --------->AHL20(2)--   agagagagaagctaataagctttgagaacttgattacagagaaaatttggtttcttcatgaattatgatttatgtatatacaaatatatatatggtacat  22035200                          <---------ZAT18                          ------>NtERF2                    <------MYB46(1)                    <------MYB83                   <---------------AtSPL8         <<<<<<<<<WRKY18 --------->DEAR3(1)        --------->WRKY18(1)      --------->ANAC58  --------->DEAR3(2)                  <---------ANAC58      --------->ANAC58  --------->ATERF1(1)                 <---------ANAC58      <<<<<<<<<<WRKY18 --------->SPL7                   <----------DOF2 ---->ANAC58       <---------------AtSPL3         <---------ANAC58 ---->AtLEC2       --------->MYB59                <---------ANAC55(1) ---->ANAC46     --------->CCA1(2)                <---------ANAC55(2) ---->ANAC58    --------->ARR14(2)                <---------ANAC58 ----AtSPL8     <---------ARR14(2)                --------->ANAC55(2) -------->DOF2----------->ARR10                  <-------TEIL          <---------LBD16   ----------->GT1   gcaaagtcaagtcaaggagatttggtaccgcccttccatcatctatctaaatacgtgtcttttcttgatgaaatacggagacaaaatgaagtagaaaaaa  22035300                                  <-----------GT1      ------>ZmHOX2a(1)                   ----------                               <---------ICU4   ---------->DOF2             ----------->HVH21                              --------->ICU4 --------->TOE2(3)        --------->DAG2      --------->DAG2                     ---------->DOF2         <----------DOF2         ---------->DOF2     ---------->DOF2        <---------YAB1   ----------->GT1 <---------CCA1(2)    --------->MYB46(3) ---------->DOF2   actgcttattatgttgacaaaacaaaagagtaatttttactctctatctttaaagtccttactaacaaacaaaaagctctgaccaaagaaaaaaagtaat  22035400                                                 <---------ICU4                                               <---------TOE2(3)                                             --------->AHL20(2)                                 <----                                            --------->ICU4                                      <----                                            <---------YAB1                                      <----                                          <---------ICU4                              <---------ANAC46                                         --------->ICU4                             <------MYB46(1)                                         <---------ATHB51                           <---------ANAC46                                         <---------AHL20(2)                         <------MYB83<----                                         --------->AHL20(2)                        --------->ALFIN1                                       --------->YAB1    <---------ANAC58   --------->GLK1(2)   <----                                 --------->TOE1(3)       <---------ANAC46   <---------ARR14(2)  -----    --------->DAG2               --------->TOE2(3)       <---------ANAC58   --------->ARR14(2)<------ZmHOX2a(1)   ---------->DOF2              --------->ZAT6 <---------YAB1       ------->MYC3   <---------DEAR3(1) ->GT1                        <-----------GT1<---------AHL20(2)     <-------MYC3   <---------AtMYB61-   aaacaaaaagcatgagactaaaccatctctattaaccctaaaaataattaatattgatggagtgagaacacatggcagaatatgggtggtgtatgaggac  22035500       --------->CCA1(2)      <---------ARR11(3)                                                                      -------      --------->ARR11(3)                                                                     <-------   <---------WOX13(1)                                                                      <---------AHL20(2) -----bZIP60(2)                                                                       ------->TEIL -----ANAC58                    <---------AtMYB61                                <---------ANAC55(1) -----TGA1a              <---------MYB52(1)                                      <---------ANAC58 -----ANAC46      <---------HSFC1(2)               --------->YAB1                <---------ANAC58 -----ANAC58      --------->HSFC1(2)              <---------ATHB12               <---------ANAC46 ---->TGA1a       --------->HSFB2a(1)      ---------->ID1                        <---------ANAC55(2) ---------->HVH21 <---------HSFB2a(1)  <----------DOF2                      <-----------RAV1(1)<-----   gtgtgatagatatgtgaagaaggttccatttgttttggtctctttgtctcaaatcatcaaacagttttcaagatagctatgttgcgtgtatgtttaatgt  22035600                                                                             <---------MYB46(3)                                                                            <---------AtMYB61                ---------->DOF2                                           --------->ALFIN1         <---------bZIP60(1)                                           <---------TOE2(3)       <-----------HVH21                                     --------->AHL20(2)    <---------At4g35610  <---------YAB1                      --------->AHL20(1)    --------->At4g35610 <---------ARR11(3)                   <---------YAB1 --------->ALFIN1 -->ICU4 --------->bZIP60(1)                                 <---------AHL20(2) --TOE2(3)    <---------YAB1   <-------TEIL           --------->YAB1   --------->DAG2   <---------YAB1 ----ICU4--------->YAB1 --------->ARR11(3)     <-------TEIL --------->AHL20(2)<-------GAMYB       ---   ttactcatctgtcatcactatagcaatatcatatacataaatagacagattcaaaataagaattttattgaataaggtgtggttacagtgattatactga  22035700  Previous    Next  AGI:  At5g54230.1    Description:  MYB49 (myb domain protein 49); transcription factor. similar to ATM4/ATMYB102 (ARABIDOPSIS MYB-LIKE 102), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G21440.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41263.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778) Range:  from: 22033476    to: 22035159    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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