Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100     <-------GAMYB   <-----------HVH21   --------->At5g28300                          <---------ICU4 ---------->AtMYB77                             --------->ATHB51 -------MYB52(1)                                <--------ATHB1 -------->HVH21                                 --------->AHL20(2) ----NtERF2 <---------ANAC58                    <---------AHL20(2) -------REM1(2)                                <---------ATHB51 --------HVH21                                 --------->ICU4             ----------->GT1 --------TGA1       ------>ZmHOX2a(2)        --------->YAB1            --------->GLK1(2) ------RAP2.6(3)  --------->ARR11(3)<---------ANAC58                   --------->ARR14(2) ---->RAP2.6(2)   <---------ARR11(3)<---------ANAC46                   <---------ARR14(2) ---->ANAC46<---------ANAC58        <---------ANAC58                  <---------GLK1(2)   gtcacggttacatagcgagtgatcttgtttttttttttgtgtgtgtgtaataatttgtatacagatagtgaagaatctgtaacaatgtttgctatcttga  22026900                                        <-----------GT1                                      <---------ICU4                                   --------->AHL20(2)                                   <---------AHL20(1)                                   <--------ATHB1                          <---------AHL20(2)<----------DOF2                        <---------AHL20(2)                    ----------->GT1<---------ICU4                                 <---------AHL20(2)                  ---------->DOF2  --------->ATHB51                               --------->AHL20(2)             <----------DOF2       --------->YAB1                            ------>ZmHOX2a(2)      <            ------>ZmHOX2a(2)     <---------ATHB12                         --------->ARR11(3)<-------          <---------ARR11(3)      --------->ICU4 <----------DOF2           <---------ARR11(3)<-------          --------->ARR11(3)      <---------ATHB51 --------->AHL20(2)<---------TOE2(3)       --------   aacaaatgagttgatctttgaaaagaaattaatccaataatttttcctttgctttaaatactcaatttgctaatgttgatcttataaatttgcagtgctc  22027000          <----------DOF2                                                                --------->CCA1(2)       <---------ARR11(3)                                                               <---------ARR11(3)       --------->ARR14(2)                                                          <---------WRKY38(1)       <---------AGP1                                                              <---------WRKY45       <---------ARR14(2)                                                         <<<<<<<<<<WRKY18       --------->AGP1                                                             <<<<<<<<<<WRKY40       --------->ARR11(3)                                             --------->AHL20(2)--------->ARR11(3)      <---------CCA1(2)                              <-----------GT1 <---------YAB1<---------WRKY12 --------->ZAT6     --------->AHL20(2)    ------>MYB83             --------->YAB1 <<<<<<<<<<WRKY62 <-----------GT1    <---------AHL20(2)  <---------MYB59--------->ANAC55(2)        --------->WRKY18(1) ---------YAB1   <----------DOF2     <-----------GT1 <---------AHL20(2)   <---------AHL20(2) --ZAT14 ------>ZmHOX2a(2)   <---------AHL20(2)  --------->ATHB12 <---------YAB1<------MYB83 --ZAT18<------ZmHOX2a(2)    --------->AHL20(2) <---------ATHB12--------->YAB1  <------MYB46(1) ->ZAT14<---------RVE1(1)--------->ATHB12 ------>MYB46(1)    <----------DOF2   --------->MYB59      -   ttatcactagatcttttttcttttaaatgatttaaattttgaccaaacaaatgatttacttatcttttatgattatttagtttggtcaaagatatagatt  22027100                      <---------YAB1                     --------->AHL20(1)                     <---------AHL20(2)                     <---------AHL20(1)                     --------->AHL20(2)                    --------->YAB1                                            --------->GLK1(2)                    --------->AHL20(2)                                        --------->ARR14(2)    <                   <---------YAB1       <----------ID1              <------------CBF              ---                 --------->YAB1  <---------YAB1                   --------->AHL20(2)             <---        --------->ARR11(3)      --------->YAB1 <---------ARR11(3) <---------AHL20(2)           <-----        --------->GLK1(2)  ------------>CBF---------->DOF2        --------->AHL20(1)        ---------        <---------ARR11(3) <---------TOE2(3)   --------->ARR11(3)<---------AHL20(2)      <---------YAB1       --------->RVE1(1)  <-----------GT1<------ZmHOX2a(1)       --------->AHL20(2)  <---------HSFC1(2) ---------->GT1 --------->AHL20(2) ---------->DOF2        ----------->GT1    <---------GLK1(2)-------   tgtagtaaaaaatctacatttattatattaacaatattaaagaggaaaagaacttggatatagttaaaaaaattggacagaatcggaagttacgattatg  22027200                                                                              <---------MYB46(3)                                                                              --------->MYB52(2)                                                                              ----------->GT1                                                                        <---------WOX13(1)                                                                      -------->ATHB1                                                                      --------->ATHB51                                                                      --------->ATHB12                                                                      >>>>>>>>>>AGL24                                                                      <---------ICU4                                                                      <--------ATHB1                                                                      >>>>>>>>>>AGL22        <---------TOE2(3)                                             --------->YAB1     <---------AHL20(2)                                               >>>>>>>>>>AGL20 <----------DOF2                                                     <---------ATHB51 ---------DAG2 ----------->GT1   ------------>CBF                    <---------ATHB12 ---->TEIL     --------->YAB1    <---------ATHB12                    --------->ICU4 --------GT1 <------------CBF  --------->WOX13(1)                    <---------YAB1           ------>ZmHOX2a(1) ----YAB1  <---------AHL20(2)------------>CBF                    ------------>CBF         --------->ARR14(2) >ICU4<---------AHL20(2)  --------->KAN4(1)           --------->TOE2(3)<------------CBF   <---------ARR14(2) -------->AtSPL8        <---------GLK1(2)     ------->TEIL      --------->ANAC46  <---------AHL20(2)<   aaccttttttaatgtaattgtaaatagattattcaatcaatgtaaatgaaactctatcttagaaatacacaataattggtttgttaaaatgggttcctcc  22027300              --------->ATHB12                   <----------DOF2              --------->YAB1                --------->WRKY12             <-------TEIL                 <---------At4g35610     --------->ATHB12                     ------>ZmHOX2a(1)     <---------ICU4             ------>NtERF2   <---------DAG2    --------->ICU4           --------->ZAT2 ----------->HVH21    <---------YAB1  <---------MYB46(3)    ----------->RAV1(2)   <---------TOE2(3)<---------REM1(1) <---------ARR14(2)                              <-----------RAV1(1)  --------->YAB1 <-----------RAV1(1)  --------->ARR14(2)                          <---------AHL20(2) ---------WOX13(1)  <-----------RAV1(1)   --------->At4g35610               ----------->GT1   agattgatgattacattcattgttgttgctatgctggccatttcctctgaccttttctctggtatatgttattttctctggtatatatatgttgttttta  22027400                                                                                          <---------O2                                                                                     ------>NtERF2                                                                                    --------->DEAR3(1)                                                                                   --------->ORA47(2)                                                                                   --------->ATERF1(1)                                                                                  <---------ATERF1(1)                                                                                  <---------RAP2.3(1)                                    ---------->ID1                           --------->At4g35610                                --------->AHL20(2)                           <---------ZAT2                          --------->ANAC55(2)                                --------->ZAT2                          <---------ANAC55(2)                                <---------At4g35610                          ----------->GT1                              <---------ZAT18    --------->TGA1a               ------->TEIL     <---------AHL20(2)                    <---------ANAC46    <---------TGA1a        --------->At4g35610     <---------ICU4 <---------WOX13(1)     <---------ANAC58    --------->O2        <---------At4g35610    --------->ICU4--------->ATHB12         <---------ANAC58  <---------ALFIN1     <-------TEIL        <-------TEIL<---------ANAC46          <------ZmHOX2a(1)  ------>NtERF2   atatagattcagctatgtatatacaaattcgtaattttttcgtttaatgactgatagttcaaataggaatcagcgtgcaagctgcgcctcccacttgtgg  22027500                                                       ---------->ID1                                                 <------MYB83                --------->GLK1(2)                <------MYB46(1)                                   --     <---------ZAT14                            <---------AtMYB61    --------->ALFIN1           -----     --------->ZAT14                         <---------ANAC46     --------->DAG2         <------ZmHOX2a(1)     --------->ZAT18            <---------------------WRI1      ---------->DOF2      --------->LBD16   acgagactgtactgagaaattcttgacacaagactgcgataaatattgtgtaggtttgtcttataaaaaaggtgtttgcattctatccgaaggacttcct  22027600                                                                                                 ----                                                                                                <----                                                                                              -------                                                                                        <----------DOF2                                                                                        ------>ZmHOX2a(1)                                                                                    <-----------GT1 ------->LBD16                          ----------->GT1                            <-----------GT1  - ->ZmHOX2a(1)                      --------->AHL20(2)     <----------DOF2<-------TEIL  --------->TOE2(3)   ccgaaaacttctacatatcgttgttgttgttcgtaaatgaaatagataattcttcatccgctttgatcaaacatgttcatgttttttatcctttaactat  22027700                                                                                  --------->AHL20(2)                                                                                  <---------AHL20(2)                                                                                  <---------YAB1                                                                                 --------->AHL20(2)                                                                                --------->YAB1                                                                             <---------AHL20(2)                                                                            <---------AHL20(2)                                                                            --------->AHL20(2)                                                                           <---------WOX13(1)                                                                         -------->HAHB4                                                                         <---------ICU4                                                                         --------->YAB1                                                                         --------->ATHB12                                                                        --------->ICU4                                                                        <---------ATHB12 ----->YAB1                                                             <---------YAB1 -----YAB1                                                             <---------TOE2(3)<---------TOE2(3) -->YAB1                                                          <----------DOF2<---------AHL20(2) --------->DOF2<---------AHL20(2)                    --------->ANAC46 --------->YAB1   --------->MYB52(1)   aataaagagttttatatttcaatgggaagaccatacatatatgaaattccattacaaacaatagaactcttttaatgattaattttaattaacgcataaa  22027800  Previous    Next  AGI:  At5g54215.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G25305.1) Range:  from: 22027289    to: 22027636    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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