Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              --------->MYB55(2)                                                                            --------->ABI4(2)                                                                           <---------AtMYB61                                                                          <---------MYB52(1)                                                                          <-------GAMYB                                                                         <------MYB83                                                                         <---------DEAR3(2)                                                                         <------MYB46(1)<---------ARR14(2)                                                                        <---------DEAR4(1)                                                                        <---------DEAR3(1)                                                                        <---------DREB2C(2)                                                                        --------->MYB55(2)  ---------                                                                        --------->MYB46(2) --------->ANAC46                                                                <---------ANAC58        ------->TEIL                                                                <---------ANAC46        --------->GLK1(2)                                                      <---------GLK1(2)<---------ORA47(1)  <---------ANAC55(2)                                              <------NtERF2     <---------ANAC58        --------->ARR14(2)                                             ------>NtERF2     <------NtERF2<---------MYB46(3)                              <---------DEAR3(1)      <---------ARR14(2)--------->MYB111(1)--------->ANAC58 -------->YAB1 <---------ARR14(2)   <---------bZIP60(1)   <-----------RAV1(1)     ----------->HVH21 ------TEIL  <---------MYB46(3)     --------->bZIP60(1)--------->GLK1(2)--------->MYB111(2)--------->ANAC58 -----HSFB2a(1)--------->ARR14(2)   ----------->HVH21 --------->ARR14(2)<---------MYB46(3)<---------LBD16   gttcatagtcactggaggttacacaagagaagacggtgatgacacggtggcaaatggattctggtggcttatggtcggtggtttctgacgaatccgcaac  22025400                                                       --------->MYB46(3)                                           <---------ANAC46      --------->MYB46(3)                                       --------->AHL20(1)        <---------MYB52(2)  --------->AHL20(1)                                       <---------AHL20(1)   --------->ANAC46         --------->AHL20(2)                                       --------->ARR11(3)  ------->GAMYB             <---------AHL20(2)             <----------DOF2          <---------AHL20(2) -------->P        <---------ETT(2)   <-----------GT1              --------->TOE1(3)   --------->YAB1------->GAMYB--------->AtMYB61 >LBD16     <---------YAB1      --------->TOE2(3)  <---------ATHB12     ----------->HVH21   gttttataccgattacttttgtttatattctaaaccctaaatattttgtgtaaatcatcaacccacaacaaactctgacgaccaaaataaaatacagaat  22025500                                                                                                    -                      --------->TOE2(3)                                                   --------->TOE1(3)                     --------->YAB1                                                       --------->TOE2(3)                    <---------ATHB12                                           <------------CBF -----                  --------->WOX13(1)  <----------DOF2               <----------DOF2    --------->ARR14(2)          --------->YAB1    <---------AHL20(2)             ------------>CBF <----------DOF2------>ZmHOX2a(1)       <---------ICU4<---------ICU4   <---------DAG2 ------------>CBF    <---------YAB1<---------ARR14(2)   tgagcacaacaattacaaaacaatcatcaatttatgtcaactttttgtcaaaaataccaatttcaatttccttttatgctttattgtcaaatccttaatc  22025600                                          --------->ANAC46                   <---------YAB1         --------->ANAC58                  <-------TEIL   ---------->DOF2                 --------->CCA1(2)        --------->ANAC58                 --------->ARR14(1)    <-------TEIL                --------->ARR11(1)    --------->CCA1(2)                <---------ARR11(3)   --------->ARR14(2)       --------->AHL20(2)    >>>>>>>>>RAP2.2   --------->AHL20(1)      <---------ARR11(3)         ---------->DOF2   <---------AHL20(1)      --------->ARR11(3)     <---------------AGL15   --------->AHL20(2)     --------->GLK1(1)<-------MYC3   <---------AHL20(2)     <---------GLK1(1)<-------MYC2  --------->AHL20(2)     <---------ARR11(3)------->MYC2  <---------AHL20(2)     --------->ARR11(3)------->MYC3                ---------->DOF2          ----- -------->YAB1  --------->ARR14(2)   <---------ARR14(2)           --------->YAB1 ------>ZmHOX2a(1)  - ---->YAB1      <---------ARR14(2)   --------->ARR11(3)  ----------->GT1 --------->DAG2    ----------   aaaaataaattaaaacaagatacgatagatatctaaaaagatacacgcgcttcgaaaaaaggaaatactcatgaaaaggtttcctatttgttttttgaac  22025700                                    ------>ZmHOX2a(2)                                   <------ZmHOX2a(2)                                  --------->ARR11(3)                                  <---------ARR11(3)                                  --------->ARR14(2)                   --------->ICU4                                  <---------ARR14(2)            <------------CBF                            --------->YAB1                   ------------>CBF      <---------CCA1(2)    <---------AHL20(2)               --------->ANAC58    ------>ZmHOX2a(1)     --------->AHL20(2)       --------->YAB1 --------->YAB1 ---->ZAT6           ======================HOX2a_HOX2a      --------->ANAC58 -------->ARR14(2)   =====================HOX2a_HOX2a     ---------->DOF2<---------GLK1(2) ----->AtSPL8        ------>ZmHOX2a(1)             <---------ICU4 ----------->GT1   tctatcctctatctctgtctctcctctatataataagatcccaagagcattactcatcacaaaagcaattgtaaaaattctctagggtttcatcgctaat  22025800                                                             --------->At4g35610        --------->ARR11(3)                                                             <-------GAMYB              <---------ARR11(3)                                                        <----------DOF2             ---------->DOF2                                                     --------->GLK1(2)            --------->ANAC58                                                     --------->ARR11(3)           --------->ANAC58                                                     <---------ARR11(3) <---------ARR11(3)                                              <----------ID1 <---------At4g35610--------->MYB52(1)       --------->ICU4        --------->MYB46(3)----------->RAV1(1)      --------->GLK1(2)<------ZmHOX2a(2)   ctctctgtaatatttgatcaagagaaaatcaacaaatatgtctgtaatgcaacaaaatctttcagttgaaccaaaatctaaaaaacgaaagatcgattca  22025900                                                      --------->ARR14(2)                                                      --------->GLK1(2)                                                      <---------ARR14(2)                                                  --------->ANAC58                                                  <---------ANAC55(2)                                                  --------->ANAC55(2)                                                 <---------LBD16                                               <---------MYB52(1)                                              <-------GAMYB                                             <---------MYB46(3)                                             --------->MYB52(2)      -------->HAHB4                        <---------TOE1(2)      <---------ICU4                     <---------ANAC58      <--------ATHB1                     <---------ANAC58<-----------RAV1(1)                       <-     --------->ICU4                 <---------DAG2--------->ANAC58      =============================HOX2a_HOX2a     <---------ATHB51               <----------DOF2  <---------GLK1(2)  <------ZmHOX2a(2)          <-   --------->YAB1            <---------YAB1<---------MYB52(1) <---------YAB1                  <------ZmHOX2a(1)   gagattaataattcatcttcttctacgaattgtgatcactttttcgttcgttacggaatctgttgtaattgtagatcaaacgtagagagacatagaggac  22026000                                                                                                 <---                                                  <-------GAMYB                         <----------ID1                                   ----------->RAV1(1) ---------->DOF2              --------->DOF5.7(2)                                  <----------ID1  --------->At5g28300              <----------DOF2                              ---------->DOF2 ------------>AtMYB77                <---------ANAC58 --------->KAN4(2)           <---------MYB52(1)<---------At5g28300                <---------ANAC58 --------YAB1              <---------ZAT6    ----------->HVH21             <---------ATHB12      ---- -----ZmHOX2a(2)   <---------WOX13(1)       <-----------HVH21      ----------->RAV1(1)<---------DOF5.7(2)   gatcattcgattacctagttgatggattacagttaagcgacatagcagtcacggttacaaagcgagtcacaacacaaatcacttgctttaacgacaagaa  22026100                                                     <-----------ARR10                                                     ------->TEIL                                                     <---------ARR14(2)                                                     --------->ARR14(2)   <---------ARR11(1)                                                     --------->GLK1(2)    <-----------ARR10                                    <---------ALFIN1 <---------ARR11(1)   ------->TEIL                          --------->ANAC46          <---------ARR14(1)    <---------ARR14(2)                        <---------ALFIN1         <---------------------WRI1                      <---------ALFIN1       --------->ATHB12             --------->ARR14(2)          <---------ANAC58--------->ANAC58  --------->ICU4               <---------CCA1(2)          <---------ANAC58--------->ANAC58  <---------YAB1             --------->ANAC55(2)    <------ ------HSFC1(2)       --------->AtMYB61  <---------MYB52(1)  ---------->DOF2          >>>>>>>>>TBF1 ----->HSFC1(2)<---------ANAC46     --------->ANAC46<---------CCA1(2)  <---------ANAC55(2)   --------   gcttcacttggtacttgacttggaccacacgcttcttcacaccgttatgatttcgaatcttactaaagaagagacgtatctaatcgaagaagaagattca  22026200             ----------->GT1             <---------MYB46(3)         --------->ANAC46        <---------LBD16      ------>ZmHOX2a(2)     --------->CCA1(2)     ===========================HOX2a_HOX2a     <------ZmHOX2a(2)    <---------ARR14(3)    <---------ARR14(2)    --------->ARR11(3)    --------->AGP1                     <---------ARR11(3)    <-----------ARR10                  --------->ARR11(3)    --------->ARR14(2)           --------->ANAC58          <----------DOF2    <---------ARR11(3)    <---------ARR14(2)              <---------DAG2                     <-------    --------->ARR14(3)    --------->ARR14(2)            <---------ARR11(3)          --------->At4g35610  ----------->ARR10      <------ZmHOX2a(1)      --------->DAG2                ---------->DOF2-------- -TEIL==========================HOX2a_HOX2a    ---------->DOF2              --------------->AGL15 ->CCA1(2)  <---------TOE2(2)    --------->ANAC58       --------->ARR11(3)  <---------------AGL15   agggaagatctacggaggttaaacggaggatactcaagcgagttcttgataaagcttagaccttttgttcacgagtttcttaaagaagctaacaagatgt  22026300  Previous    Next  AGI:  At5g54206.1    Description:  12-oxophytodienoate reductase-related, similar to 12-oxophytodienoate reductase OPR1 (Arabidopsis thaliana) GI:3882355 Range:  from: 22024129    to: 22025658    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g54210.1    Description:  NLI interacting factor (NIF) family protein. similar to NLI interacting factor (NIF) family protein [Arabidopsis thaliana] (TAIR:AT1G20320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47916.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN76945.1); contains InterPro domain NLI interacting factor (InterPro:IPR004274); contains InterPro domain FCP1-like phosphatase, phosphatase domain; (InterPro:IPR011947) Range:  from: 22025838    to: 22026758    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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