Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           --------->O2                                       ------->GAMYB                                      --------->MYB46(3)                                ----------->HVH21                               <-----------HVH21                               --------->LBD16                              --------->ANAC55(2)                              --------->ANAC46                              <---------ANAC55(2)                              <---------TGA1a                              --------->TGA1a                              =============================bZIP_DOF             <---------GLK1(2)                              <---------O2<-------MYC3                          --------->ARR11(3)                              =================MYC_MYB                          <---------ARR11(3)                         --------->ZAT2<---------ALFIN1                         <---------ARR14(2)                         <---------At4g35610                                  ----------->ARR10                         --------->HSFB2a(1)                                <------ZmHOX2a(1)                         --------->At4g35610                              <---------TOE2(3)             ------>MYB46(1)  --------->O2------->MYC3             <---------ANAC58  <---------MYB52(1)     <---------HSFC1(2)                        <---------ANAC58      <---------WOX13(1) <-------GAMYB           --------->HSFC1(2)                    <---------ANAC58 <---------ARR14(3) -----DOF2   ------>MYB83<---------HSFB2a(1)    <----------DOF2<---------ANAC58 --------->ARR14(3)   tgccgttgctaaacctagccctgaagaagctcccgtgacaaccacgtttccttttctaagtgttttcttgcggtctaaggaagattttgtgactgatgga  22009600                          <---------ICU4                          --------->KAN4(2)                          --------->YAB1                         --------->KAN4(1)                         <---------KAN4(1)                        <---------KAN4(2)     --------->ANAC58                  <---------At4g35610      ------>ZmHOX2a(1)                  --------->At4g35610<---------ICU4                                           <------             <---------ANAC58       <---------YAB1                                         <---------ICU4             <---------ANAC58   <----------DOF2              <---------REM1(2)           <---------GLK1(2)             <---------ANAC46   <---------DAG2--------->ANAC58 ---------->DOF2     --------->ATHB12   gttgaagtcgcgattgcttgagctcgaataatcgctttattattcctcaagctctgttccctctacaaagtagaagcatttcaattgattagattattac  22009700                                               --------->At4g35610                                         <---------ANAC58                                    <------MYB46(1)                                    <------MYB83                               <----------DOF2                                   <---------------AtSPL8                     <---------ANAC58      -                                   --------->MYB111(1)           ---------->DOF2                   --                       ---------->DOF2   <---------ANAC58<------ZmHOX2a(1)<----------DOF2 -----------                   --------->YAB1  --------->MYB59     <---------TOE2(3)<---------At4g35610        --        --------->ANAC46           --------->MYB46(2) --------->YAB1    --------->At4g35610        --        --------->ANAC58           <---------MYB46(3)<---------ATHB12   --------->ZAT2  ---------->DOF2        --------->ANAC58       <---------YAB1  <---------At4g35610      <---------ZAT2 --------->LBD16 -----GT1  >>>>>>>>>>GT-3b <---------GLK1(2)  ------->TEIL   <----------ID1   <---------ANAC58     --   atcattttccaagaaaaatactcataaaagattgtgtttggtaccttgcatctcaatgaggaagagacaaagtcagctttgctttgctccgaaagtgaaa  22009800                                                           ------->GAMYB    --------->DEAR3(2)                                     --------->AtMYB61  ------>MYB46(1)               --------->At4g35610       --------->MYB46(3)  ------>MYB83              <---------YAB1               --------->ANAC58  --------->MYB52(1)      --------->YAB1                 --------->ANAC58              --------->bZIP60(2) -------->DEAR3(1)       --------->ICU4              --------->AtLEC2                  --------->ANAC58 ------->ANAC58          <---------YAB1         <-----------GT1                  --------->LBD16 >GT1                  --------->YAB1      <---------AHL20(2)                   --------->ANAC46 ------->ANAC46       --------->ICU4       --------->AHL20(2)    --------->TOE1(2)     --------->ANAC58 ------->ANAC58 <----------DOF2 <---------At4g35610  --------->ANAC46    <---------AHL20(2)         - ------->ANAC55(1)   <---------WOX13(1)   --------->AHL20(2)     --------->TOE2(2)----------->HVH21--   caccgaacagactagactctttgaatgatgatgatgctgaagcatttaattttccctgcaaccaaaacatgcgaattaatctccgagacaggtcataaac  22009900                                                   ------>NtERF2                                                  --------->LBD16                                                 <---------ANAC58                                                 <---------ANAC46                                                 <---------ANAC58                                                <---------LBD16                                   <---------AHL20(1)                             --------->ZAT2                                   --------->AHL20(1)                             --------->At4g35610                                   <---------AHL20(2)                       ---------->DOF2                            ----------->GT1  <----------DOF2           <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) -------->DAG2          ---------->DOF2 <-------TEIL               <------ZmHOX2a(1)<----------DOF2 -------->DOF2      ---------->DOF2--------->AHL20(2)     ---------->DOF2---------->DOF2   >>>>>>>>>>   aaaaaggaaacgattactaaaacaaagaaagagataataaaatacatctttgcggacagagaaagcagaggagaccaaagaagcagcttgaagggccatt  22010000                                                             <-----------TBP                   <-----                                                             --------->AHL20(2)              <-------                                                     <---------ANAC58                       <--------                                                     <---------ANAC55(1)                   --------->PCF5                                                     --------->ANAC55(2)                   --------->TCP16(1)                                                     <---------ANAC55(2)                   <---------PCF2 <---------ANAC46                                    <---------ANAC58                    <---------MYB46(3) <---------ANAC58                                <---------ANAC58                       --------->ALFIN1 <---------ANAC58   <---------ZAT14   *TSS       <---------ANAC58                    --------->DAG2 >>>>>>>LFY  ---------->DOF2       --------->AtLEC2  <---------ANAC46              ---------->DOF2   gtttcgtttaagacttaaagagtgtaatgtgaatgttatgcaaatgtctgtgcttgcgtgagtttatatagaagttgagacaagagaaaggtggtcccct  22010100                     --------->ALFIN1                 --------->CCA1(2)                 <---------GLK1(1)                 --------->GLK1(1)                <---------ARR14(2)                --------->ARR14(2)          ---------->DOF2               <------ZmHOX2a(1)     <----------DOF2                                           <-----             <---------TOE2(2)     <---------YAB1                               <---------YAB1 ------             <---------TOE1(2)    <---------ARR11(3)                          --------->YAB1   <----- ----ALFIN1--------->TOE1(2)      --------->ARR11(3)                 ---------->DOF2  <---------HSFB2a(2) --ATERF1(1)------>ZmHOX2a(1)  <---------GLK1(2)                  --------->TOE2(3)   --------->HSFB2a(2) -ZAT18    --------->TOE2(2) <---------TOE2(3)                <----------DOF2<---------ATHB12--------   cccatatgtgtttcctaggatatgtgtggataagattatctttagggaaagtttttgtcagtttcttttcttaaagccaatgataattcgagaattagat  22010200           <---------RVE1(1)           <---------CCA1(1)          --------->ARR11(3)      <---------At4g35610  <-----------HVH21    <---------AHL20(2) ----GLK1(2)      <---------TOE2(3)                                              <---------STY1(1) --->ARR11(3)  <---------AHL20(2)                                            <---------ZAT18 ----ARR11(3)  --------->AHL20(2)            <----------DOF2   --------->MYB52(1)--------->STY1(1) --->ARR10<---------ARR11(3)             <---------CCA1(2) <------ZmHOX2a(1) --------->ZAT18        -   tttctgtcagtagatattttaatgtataatttcatgggactccatctctttgtgtatgggaggattaacagagagctagagccctagaggtatgaaacaa  22010300                                                                                     <-----------GT1                                                                                  <---------YAB1                                                                                 --------->AHL20(1)                                                                                -------->ATHB1                                                                                <--------HAHB4                                                                                <---------ICU4                                                                                --------->YAB1                                                                                --------->AHL20(2)                                                                                <---------AHL20(2)                                                                                --------->ATHB51                                                                               --------->ICU4                                                                               <---------ATHB12          <---------ANAC58                                                     <---------ATHB51          <-----------------AGL1                          <---------YAB1   <---------MYB59          <---------ANAC46                              --------->YAB1    --------->ANAC58          <---------ANAC58      ---------->DOF2        --------->ICU4     --------->ANAC58    ------- -------->YAB1                ------>ZmHOX2a(2)--------->ATHB12           --------->ANAC46  ---------   aattatactctgacttgttatggacactctgatctaaagataaaactgttcattgaaatgatgaattgacaaaaatacccaattattttacatgtaaaga  22010400                                            <---------GLK1(2)                                          <---------ARR11(3)    ---------->DOF2                       <---------ARR14(2)     --------->YAB1  --------->TOE2(3)                       --------->ARR14(2)    <---------YAB1 ---->GT1                           <-----------GT1           --------->YAB1 ->DOF2      --------->YAB1   ---------->DOF2              ----------->GT1   taaacctaaagacaattacaaaatgtgtatacaaaagtttaccatatattctctccttgaagagttataatatcagagacaaattctacaaacttcaagt  22010500  Previous    Next  AGI:  At5g54190.1    Description:  PORA (Protochlorophyllide reductase A); oxidoreductase/ protochlorophyllide reductase. Identical to Protochlorophyllide reductase A, chloroplast precursor (PORA) [Arabidopsis Thaliana] (GB:Q42536;GB:Q9FK22); similar to PORB (PROTOCHLOROPHYLLIDE OXIDOREDUCTASE B), oxidoreductase/ protochlorophyllide reductase [Arabidopsis thaliana] (TAIR:AT4G27440.2); similar to PORB (PROTOCHLOROPHYLLIDE OXIDOREDUCTASE B), oxidoreductase/ protochlorophyllide reductase [Arabidopsis thaliana] (TAIR:AT4G27440.1); similar to Protochlorophyllide reductase, chloroplast precursor (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) (GB:Q01289); contains InterPro d Range:  from: 22008225    to: 22010038    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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