Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   ------->TEIL      --------->ATHB12      --------->ATHB51      -------->ATHB1     --------->ICU4     <---------ATHB51     <---------AHL20(2)     --------->AHL20(2)  --------->AHL20(2)  <---------AHL20(2)                                                                     --------->At4g35610  <---------AHL20(1)                        --------->MYB52(1)                   --------->MYB46(3)  --------->AHL20(1)                       <---------ATHB51        <---------YAB1<---------MYB52(2) --------->AHL20(2)         --------->ZAT14<---------ATHB12     ------->TEIL  <----------ID1  ------- -->DOF2        <---------AtLEC2   ------>ZmHOX2a(1)  ---------->DOF2 ------->TEIL------->GAMYB   ---   acattaaattattgatatgcatgtactatgtacagtcctaaacaaataatggatactaaagctatgtatatgaatgcaaaacaacaaactctgatgaatc  21989300                                                               <---------AHL20(2)                                                           <---------AHL20(2)                                                          <---------AHL20(1)          <---------RAP2.6(2)                                                         <---------AHL20(2)      --------->ARR11(3)                                                       <---------AHL20(2)        <---------ARR11(3)                        <---------ANAC58               --------->AHL20(2)        <---------AHL20(1)                        <---------ANAC58             <---------AHL20(2)          --------->AHL20(1)          <---------ANAC46                           --------->AHL20(2)        <---------AHL20(1) >TEIL    <---------ANAC55(2)                 ----------->GT1<---------AHL20(2)--------->AHL20(1) -------->GT1     <---------AHL20(2)   <---------At4g35610--------->AHL20(1)   <---------ARR11(3)   cagttatatactacgtataatttatagcttcccctgtatacatctgtctggttatatatatatattttttttttaaaccaaaatattttcggctaaattt  21989400                                         <---------AHL20(2)                                         <---------ICU4                                         --------->ATHB12                                     --------->AHL20(2)                                     <---------AHL20(2)                                    --------->AHL20(2)                               ------>MYB46(1)                       <---------ICU4                               ------>MYB83                      --------->ICU4       <---------ICU4         --------->ORA47(1)                 <---------YAB1       --------->YAB1        --------->DEAR3(1)            <----------DOF2                       ----      --------->ICU4         --------->MYB46(3)           <---------ANAC58                      -----      <---------ATHB12       <---------MYB59            ------->TEIL--------->ICU4              -----  ===============================HOX2a_HOX2a         <---------REM1(1) <---------YAB1     <---------GLK1(1)  <------ZmHOX2a(2)         --------->DEAR3(2) --------->HSFB2a(2)  <---------YAB1        --------->GLK1(1) --------->ARR11(3)       <------ZmHOX2a(1)    <---------HSFB2a(2)--------->YAB1       <---------TOE2(3) <---------ARR11(3)   --------->MYB52(1)<---------AHL20(2)<---------ANAC58   <---------LBD16    -----   gaagatcaatgatgaagtatcaactacaggaccgaccatttatttattgctagaaatgtagcttttgatgatgattatttgtggaaattaagaaatccaa  21989500                                                                                                 <---                                                                                                <----                                                                                               ------    <----------DOF2                                                                           <------   ------>ZmHOX2a(2)                              ----------->GT1                            -------- --------->ARR11(3)                    <---------ANAC58                                    --------->AHL20(2) <---------ARR11(3)                    <---------ANAC46                                 --------->CCA1(2) ------->RAV1(2)                       <---------ANAC58--------->ICU4  ----------->GT1 --------->ARR11(3) ->MYB46(1)     <----------DOF2<---------ZAT14   ----------->GT1      ----------->GT1  <---------ARR11(3) ->MYB83 <---------AHL20(2)    --------->ZAT14  <---------ANAC46--------->DAG2     ---------->DOF2--- --->P   --------->AHL20(2)    --------->ZAT18--------->GLK1(2)---------->DOF2<----------ID1<--------   cctgatctttttttaatacttttacatctaatgtacactgtgcgtgagaagcgggtaatttttaaaaaaggagagataaaaaaacaaaagatatataata  21989600   ----------->GT1              --------->ATHB12 ---------->DOF2               <---------YAB1 ------TOE2(3)      --------->YAB1                                ---------->DOF2                 <-- -----ICU4         <---------YAB1<------------CBF           <------------CBF                      --- --->ICU4--------->AHL20(2)    --------->ICU4             <---------AHL20(1)                      --- ---AHL20(2)    --------------->AGL15   ----------->GT1   --------->AHL20(1)               *TSS  <--- ->YAB1--------->AHL20(2)   --------->ICU4                <---------ARR11(3)            --------->ZAT6 -------->GT1   <---------------AGL15   <---------ZAT6    --------->ARR11(3)            --------->ANAC46 -AHL20(2)    <-------TEIL<------------CBF               ----------->TBP         <---------GLK1(2)<--   atgtaaagaaaaaatatacatattatagtattgattattgaagtgttaaatggtcgtctatatattgacaaagaagtctctcacattctcacactactca  21989700               ------>ZmHOX2a(2)             <---------AGP1             <---------ARR11(3)             --------->AGP1             --------->ARR11(3)                                                           --------->ALFIN1            <---------CCA1(2)                                                        ------>ZmHOX2a(2)           ----------->ARR10                                                       --------->ARR11(3) -------ARR11(3)                                                                   <---------ARR11(3) ------>ARR14(2)                                                                  --------->YAB1 ------>ARR11(3)    <----------DOF2                   --------->ANAC58            <---------ICU4 ------CCA1(2)<------ZmHOX2a(2)                       ----------->GT1            --------->ICU4 -------ARR14(2)<----------DOF2  --------->YAB1       --------->ANAC58         --------->YAB1   -----   aatcttcatcgcttagatctttctttaaaaacaaatcagaaattttcttaagagtcaagaaaatttcaagaaccaattctataatgatctcagtggtgat  21989800                                                             --------->ANAC46                                                             <---------DEAR3(1)                                                            <---------LBD16                                                      <---------HSFB2a(1)                                                      --------->HSFB2a(1)                                                      --------->HSFC1(2)                            <---------At4g35610       <---------HSFC1(2)                            <------NtERF2           <---------ARR14(2)                            --------->ZAT2          <---------GLK1(2)                           <----                            <---------ZAT2          --------->ARR14(2)                         <-----                       --------->ANAC58           <------NtERF2                              ========                       --------->ANAC46          --------->LBD16                             <-------                       --------->ANAC55(1)       ------>NtERF2        --------->LBD16        ------>ZmHOX2a(2)                       --------->ANAC58         --------->LBD16      <---------ANAC46        <-------                      <---------LBD16         --------->ABI4(1)     <---------LBD16        --------->ARR14(2)                    --------->ZAT14           ------>NtERF2<---------ALFIN1                <---------ARR14(2)                    <---------ZAT14          --------->DEAR3(1)    --------->SPL7         <------ZmHOX2a(1)                    --------->ZAT18         --------->MYB46(3)     --------->MYB52(1) <---------MYB52(1)                    <---------REM1(2)       --------->DEAR3(2)   <---------SPL7      <---------SPL7      <---------At4g35610   --------->At4g35610<---------LBD16  <---------ANAC58 --------->ANAC58 ---->ICU4      <---------------AtSPL8     <---------At5g28300  <---------ANAC58 --------->ANAC58<---   tcttactgagctactagtagagtacacggcagctctagctaaactcaccgccgggattcttccacggcgtaccggagatagaaacgccgtaaggatcggt  21989900       ------>ZmHOX2a(1)   <-----------GT1 -----AtMYB61                      --------->HSFB2a(1)                                              < ----MYB52(1)                      --------->HSFC1(2)                                        <------- =============HOX2a_HOX2a   --------->O2    --------->GLK1(1)                    <----------DOF2   -- --DEAR3(1)                 <---------O2    <---------GLK1(1)                    <---------DAG2   <-- --MYB46(3)  <---------ALFIN1     <---------YAB1                     <---------YAB1   <---------AHL20(2) ------MYB46(3)           ------->GAMYB  ------>ZmHOX2a(1)       <---------GLK1(1)   <---------AHL20(2)   ggttttctccttccttcaccttcttcaacgacgtcgatgattcctgatttctcttctcatctagttgatttctgatttgccaacttttttattttggctg  21990000                          --------->At4g35610                          --------->ZAT2                          <---------At4g35610                          <---------ZAT2                        ------>ZmHOX2a(1)                        ========================HOX2a_HOX2a                      ------>ZmHOX2a(2)                     <------ZmHOX2a(2)                    <---------ARR14(2)                    <---------ARR11(3)                    --------->ARR11(3)                    --------->ARR14(2) ---------AHL20(2)  <---------GLK1(2)    ------>ZmHOX2a(2)           <-----------GT1 --At4g35610<XXXXXXXXXXXXXXXXXXXXMIR832-5P                       <---------RVE1(1)              ----- ------->AHL20(2)   --------->AGP1     --------->ARR11(3)       <---------ARR11(3)              <---- -------WOX13(1)   <---------At4g35610 <---------ARR11(3)       --------->ARR11(3) ---------->ID1   atttattcagtttttgacttcagatcctagctcccttctatgatctagtcgatgagaagcgactgagatttttactgagtgtctcgtcgtcttgaatcac  21990100                                                                                              <------                                         --------->AHL20(2)                                  ------>ZmHOX2a(2)                                        <---------ICU4                                      <------ZmHOX2a(2)                                       --------->ICU4                                       <--------                                 ------->TEIL             <--------P                       --------->ARR11(3)                                <---------CCA1(2)         <---------WOX13(1)               <---------ARR11(3)                           <---------ARR14(2)            <-------GAMYB                     <---------ARR14(2)                           --------->GLK1(2)            ----------->GT1                    --------->ARR14(2)                           --------->ARR14(2)           <---------MYB46(3)                 --------->AGP1 ---->ANAC55(2)           <---------GLK1(2)--------->AHL20(2)                              <---------AGP1 -----ANAC55(2)    <----------DOF2 <---------MYB59     <---------AtMYB61                  <---------CCA1(2)   gttttcttgaatcgtatagagctttgtagaatctgtatctaatttttatatatagagatggttgatagttttgaagaactaataagtttactagatcttt  21990200  Previous    Next  AGI:  At5g54145.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G27657.1) Range:  from: 21989691    to: 21990309    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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