Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    <--           ---------->DOF2                                                                 <---------ANAC46 --------->ARR11(3)                                                                        <---------ANAC58 <---------ARR11(3)                                                                        <---------ANAC58 --------->AHL20(1)                                                                  <---------AHL20(2) <---------AHL20(1)                            --------->YAB1        ------->TEIL  --------->DOF5.7(2) ------->ARR11(3)                            <---------WOX13(1)   <---------YAB1  --------->TOE1(3) --------ARR11(3)              <---------HSFB2a(2)                --------->ICU4  --------->TOE2(3) ------->AHL20(1)              --------->HSFB2a(2)<-------TEIL  --------->YAB1    ----------->GT1---- --------AHL20(1)        ------->TEIL --------->AHL20(2)  --------->ZAT6         ----------->GT1 <---   aaatattttttgtgaaagtaatacatgaatgttttggaaaaaaaatgaatgatacattttccactataatgaatatgttcagaacgttaaattgtgtgtt  21930900                      --------->AtMYB61                     --------->MYB46(3)           <-----------HVH21     <---------At4g35610                                      ---------->DOF2          <---------ZAT6   <---------MYB52(1)                                          --------->TOE2(3) -------YAB1         <---------MYB55(2)                           ------->TEIL <---------AHL20(2) ----->AHL20(2)--------->At4g35610                              <-------TEIL<----------DOF2<---------TOE2(3) ------AHL20(2)<---------At4g35610                             --------->AtLEC2--------->AHL20(2)   ttaatagttttagtgtcagataaaccaccgttttcagataatacttcaaatccatttcgttatacatgcatcgaaagtcttttaattcacattaaagttt  21931000                                                                              --------->CCA1(2)                                                                         <---------At4g35610                                                                        <-------TEIL                                                                       <--------P                                                                     <------MYB83                                                                     <------MYB46(1)                                                                     <---------ANAC46                                                                    --------->MYB59                                                                    --------->MYB111(2)                                                                    --------->MYB111(1)     ---------                         ---------->ID1                           <<<<<<<<<MYB98   ------->TEIL            --------->AHL20(2)      <---------YAB1  <----------DOF2 --------->MYB46(2)      <--------            <---------AHL20(2) <-----------GT1--------->YAB1      <---------MYB52(1) <---------AHL20(2)   ttgctctaaaaattttaaatgtgatttctcgttttactatcaatgcattagtaactttgacaatataagttaggtagatgatatgaattttttgatgtca  21931100                                                                                          <----------DOF2                                                                                      <---------CCA1(2)                                --------->ZAT6        <---------YAB1                <---------ANAC58 >bZIP60(1)                  <---------CCA1(2)--------->TOE2(3)               <---------YAB1 -bZIP60(1)         <<<<<<<<<MYB98           <---------YAB1          <---------ZAT6 <---------ANAC58   ttgtatgtcttctatagtatatgttaaacttatatcactagaaacttatcttagttatgaatacaaagtttgtgttaattttgtttgcttatcttttaca  21931200                                                                                    ----------->GT1                                <---------ANAC46                                  ---------->DOF2                              --------->ALFIN1     ------>ZmHOX2a(1)      --------->ZAT18                            <---------ANAC58      --------->TOE1(3)       <---------ZAT18------------                            <---------ANAC46      --------->TOE2(3)     --------->At4g35610       ------------>CBF     <---------ANAC58--------->ANAC46           *TSS   ----------->RAV1(1)       <---------YAB1 <---------YAB1  ----------->TBP   --------->ANAC46<---------At4g35610     -----   tagaacaccatcaatgttttaagtatgagtgcgtgtgtgtatatatacacatccttagccacaacgttgtacatagctcacaacaaaagaaaaaacaaaa  21931300                               --------->At5g28300                              ----------->GT1                <---------GLK1(1)                --------->ARR14(2)                --------->GLK1(1)                <---------ARR14(2)                            <------ZmHOX2a(2)   ----------->GT1           ----------->GT1                 <---------ARR11(3) ------------>ANAC81     <-----------HVH21                   --------->ARR11(3) ----->DOF2----------->GT1 <-----------RAV1(2)         --------->ZAT6   aagaagagaaaaatggagaattctcagagtcagggtaaaaacaagaagaagaggctaacacaagatcaagttagacaactggagaagtgcttcactatga  21931400                 ------>ZmHOX2a(2)                <------ZmHOX2a(2)                --------->CCA1(2)                                                          <---------               --------->ARR14(2)                                                       --------->ANAC58               <---------AGP1                                                           --------->ANAC58               --------->AGP1 ------->GAMYB <------MYB46(1)                         --------->ANAC58               <---------ARR11(3)           <------MYB83           <----------DOF2 --------->TOE1(2)               <---------ARR14(2)       --------->ZAT2       --------->O2    --------->HSFB2a(2)               --------->ARR11(3)       <---------ZAT2---------->DOF2        <---------HSFB2a(2)<----              <---------CCA1(2)<-----------HVH21   --------->TOE1(3)        ----------------->AGL3     <---------ANAC58       <---------At4g35610    --------->TOE2(3)        ----------------->AGL1     <---------ANAC58       --------->At4g35610--------->ETT(2)  --------->At4g35610--------->ANAC58   acaagaagcttgagccagatctgaaacttcaactgtcgaaccagcttggtctacctcaaagacaagtcgctgtctggttccaaaacaagcgagccaggtt  21931500                                                    --------->At4g35610                                 --------->ZAT14    --------->ZAT2                          --------->ZAT14           <---------At4g35610                          <---------ZAT18        <---------At4g35610 ---------->DOF2       <---------GLK1(2)                          <---------ZAT14    --------->ANAC46    --------->ANAC58          --------->ARR14(2)                          --------->ZAT18    --------->ANAC58    --------->ANAC58          <---------ARR14(2)                        --------->ANAC46     --------->ANAC58------>NtERF2             <---------ZAT14                      --------->ZAT6     --------->ANAC46   <---------ETT(1)           --------->ZAT18 --RAV1(2)            <---------ALFIN1   --------->ANAC58   ----------->HVH21          <---------ZAT18 ---TEIL            ----------->RAV1(1)  --------->ANAC58   --------->ANAC46           --------->ZAT14   caagactcagtctcttgaggtccaacactgcactcttcagtccaagcacgaagcagctctctccgacaaggcaaagttagagcatcaagtgcagtttctc  21931600                                                                                                  <--                                                        ------>ZmHOX2a(1)                         ---                                                      ----------->RAV1(2)                       <----                                                  --------->GLK1(2)                             -----                                                 <---------ARR14(2)                          --------                  --------->ANAC58               --------->ARR14(2)                         <------ZmHOX2a(2)                  --------->ANAC58               <---------ARR11(3)                        --------->ARR11(3)     --------->At4g35610  <---------At4g35610    <---------GLK1(2)                         <---------ARR11(3)     --------->ZAT2       --------->At4g35610  <---------YAB1                  <---------ANAC58------     <---------At4g35610  --------->ZAT2    <---------ATHB12  <---------YAB1   <---------ANAC58<-----   caagatgagctgaagagagcaaggaatcagcttgctctgttcacaaatcaagattctcctgttgataattctaatcttggttcttgtgatgaagatcatg  21931700                                                                 -------->P      --------->ALFIN1                                           ------->TEIL -------YAB1                                             ------>ZmHOX2a(2) ------>ICU4                                           <---------ARR14(2) -----ICU4                         <----------DOF2     --------->ARR14(2) ---->YAB1                        <---------ANAC58     ------->TEIL ->YAB1                 <---------DAG2                 --------->ARR11(3) --->ICU4               <----------DOF2                <---------ARR11(3)                  --------->ANAC46 ----YAB1<---------AtMYB61        <---------ANAC58    <---------CCA1(2)        <---------GLK1(2)   atgatcaagtggtggtattcgacgagctttacgcttgctttgttagcaatggacatggatcttcatcaacctcatgggtctgattctgtttcgacgcaga  21931800  Previous    Next  AGI:  At5g53980.1    Description:  ATHB52 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 52); transcription factor. Identical to Homeobox-leucine zipper protein ATHB-52 (ATHB-52) [Arabidopsis Thaliana] (GB:Q9FN29); similar to ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G15150.1); similar to unknown [Populus trichocarpa] (GB:ABK94977.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Helix-turn-helix motif, lambda-like repressor; (InterPro:IPR000047); contains InterPro domain Homeobox; (InterPro:IPR001356) Range:  from: 21931271    to: 21931975    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version