Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          <---------YAB1                                      <--------HAHB4                                      <---------AHL20(2)                                      <---------ICU4                                      --------->YAB1                                      --------->ATHB12                                      --------->ATHB51                                      -------->ATHB1                                      -------->HAHB4                                     <---------ATHB51                                     --------->ICU4                                     <---------YAB1                                   <---------ICU4                                   --------->YAB1                                  <---------AHL20(2)     <---------YAB1                               --------->ATHB51          --------->AHL20(2)                               -------->ATHB1            <---------AHL20(2)                               --------->YAB1         <---------AHL20(1)                               <---------AHL20(2)  --------->YAB1                               <---------ICU4      --------->AHL20(2)                               -------->HAHB4     <---------YAB1                               <--------HAHB4    --------->AHL20(2)                              --------->ICU4     <---------AHL20(2)                              <---------ATHB12   --------->AHL20(1)                              <---------YAB1     <---------AHL20(1)                      <---------GLK1(1)                    <---------YAB1--------->AHL20(2)  --------->AHL20(1)                --------->ARR11(3)       --------->AtLEC2       <---------ATHB51  --------->YAB1      --------->AHL20(2) --------->YAB1 --------AtLEC2  <----------DOF2 <---------YAB1<---------YAB1       <---------AHL20(2)<---------YAB1   ttcatggctatgcaaatttcttttgatagctaattattaattattagttattataatatataattgttttttaatttagttttaaacgatgatatcggta  21927400                                                 ----------->GT1                                                 <---------ANAC46                  <-----------GT1                                                 <------MYB46(1)                --------->YAB1                                                 <------MYB83                   --------->TOE2(3)                                                --------->MYB46(2)            --------->ARR11(3)                                           ------>ZmHOX2a(1)                  <-----------ARR10                                          --------------->AGL15               <---------ARR11(3)    -                                         ----------------->AG               <---------AHL20(2)      <                        ----------->GT1  <-----------------AGL1            --------->AHL20(2)       <                        --------->YAB1   ----------------->AGL1        --------->AHL20(1)           <                ----------->GT1    <---------ATHB12                    <---------ARR11(3)     ------>ZmHOX2a(1)       --------->AHL20(2)        <-----------GT1--------->MYB59<---------ANAC46 --------->TOE1(3)  --   atgaaacaaatatttatgggctaaaatcgtaatttcaaccatttcctagtttggtatatttgtttgggtagaatatataaaatcttaacccatctcctag  21927500              <---------AHL20(2)        ----------->GT1 ---------->GT1                                         --------->AHL20(1)              <---------AHL20(2) ------MYB83 --------->AHL20(2)       --------------->AtSPL3                        ------>ZmHOX2a(1) ---------ANAC46    <---------YAB1    --------------->AtSPL8  ----------->GT1 <-----------GT1 ------MYB46(1)   --------->YAB1 <---------ZAT18        <---------AHL20(2)<<<<<<<<<SARD1--------->AHL20(2) ------->MYB59--------->AHL20(2) --------->ZAT18        --------->AHL20(2)<<<<<<<<<CBP60g   ttgggttaaaatgtataaaattataagaaatttagtgcaattcgtacttaaaccaaaattttttgggttaaatccaaatttcactcctaataaaacaaat  21927600                                         <---------AHL20(2)                                  ----------->GT1                                <---------ICU4                                --------->YAB1                                                   ----                               --------->ICU4                                              <---------ANAC46                             --------->YAB1                    ----------->GT1             <---------ANAC58                  <-----------GT1<---------TOE2(3)            <---------TOE2(3)          <---------MYB46(3)           ----------->GT1  <---------ATHB12            --------->AHL20(1)              --------->ALFIN1          <---------TOE2(3) <---------ATHB51            --------->AHL20(2)  ----------->GT1<---------ANAC58    <---------AHL20(2)  --------->WRKY18(1)             <---------AHL20(2) <------ZmHOX2a(1)   ------   ccatatataaacaaggttattttctggtcaataataatgttatttttttgggtcaaaataaaataatgttatatgaaggagaaaaaacgagtggctggaa  21927700                                        <---------AHL20(2)       <---------ARR11(3)        ----------->GT1                    --------->ANAC46       <---------AHL20(1)    <---------ARR14(2)            *TSS   --------->ANAC46       --------->AHL20(1) ------------>CBF                --------->YAB1  ------------>CBF       <-----------------AGL1        --------->WOX13(1) ------->GT1 --------------------->WRI1--------->AHL20(2)<---------ATHB12                       <<<<< ---->DOF2<---------AHL20(2) --------->ARR14(2)      ------------>CBF        --------->YAB1  <<<<<<<<   agtaaacaatattttcttagttttcttctccaatctggcaaataaatctcactctctcaatcaaaaacacacatcaaaatcaaaaccttctcttcttctt  21927800                                                ----------->GT1                                                <---------ANAC46                                         <---------------AGL15                                         --------------->AGL15                                        <-----------------AGL2                                        ----------------->AG                                        ----------------->AGL2                                        ----------------->AGL1                                    <---------ATHB12                           <------ZmHOX2a(2)    <---------ANAC58              ------>MYB46(1)        ---------->DOF2      <---------ARR11(3)    <---------ANAC58 --------->ANAC46   <-----------------AG                  --------->ARR11(3)    <---------ANAC46 --------->ANAC58   <-----------------AGL1    --------->MYB52(1) <<<<TBF1            --------->ANAC58   ============================================================= <TBF1    <---------ABI4(2)       ------>MYB83 --------->MYB59  <---------MYB52(2)               ----   cttcttgcgagttgcaccgaaacactcaacaaaaccaaatcatccaaattgggtaaaacaaaagaaactaacaagaagaagatcgaattcaagaagaaga  21927900                                           <---------ARR14(2)                                           --------->ARR14(2)                  ------>NtERF2            <---------GLK1(2)                                 --------                 --------->DEAR3(1)  ---------->DOF2                       ------->GAMYB <------ZmHOX2a(1)               ------->GAMYB  --------->YAB1--------->GLK1(2)           ----------->RAV1(1) <------ZmHOX2a(1)              --------->DEAR3(1) <---------------AGL15          --------->ANAC58    <---------REM1(1) ================================================MADS_MADS      --------->ANAC58  --------->At4g35610 ----->CCA1(2)--------->MYB46(3) --------------->AGL15        ---------->DOF2  <------ZmHOX2a(1)   --   gatggagaatggagcaacgacgacgagcacaattaccatcaaagggattctgagtttgctaatggaaagcatcacaacagaggaagatgaaggaggaaag  21928000                                --------->ZAT14                              --------->ANAC46                            <---------ALFIN1      ----------->RAV1(1)                          ------>MYB46(1)       --------->SPL7                        <---------MYB59      <---------ANAC58           --------->LBD16------>MYB83       <---------ANAC58     <---------ARR11(3)--------->ANAC58      <---------ANAC46     --------->ARR11(3)--------->ANAC58     --------------->AtSPL8 -->DOF2 <---------LBD16--------->MYB46(3)  <---------------AtSPL8             <---------GLK1(2) --------->GT1       --------->GLK1(1)      --------------->AtSPL3           <---------YAB1   agagtaatatctctgggaatgggagacccaacactctactcgtgttttcgtacaacacaagtctctcttcaagctgtttctgattctcttctctccaaca  21928100                                   <---------ZAT2                                   --------->ZAT2                                   <---------AHL20(2)                       <---------DEAR3(2)                                       <------MYB83  -------                     <---------MYB52(1)                                         <------MYB46(1)                  --------->DEAR3(2)            <----------DOF2 <---------CCA1(2)<<<<<<<<<<MYB80                 -------->P   --------->HSFB2a(2)          <-----------GT1      ----------->GT1                 ------>MYB83 <---------HSFB2a(2)      <----------DOF2         <---------AtMYB61   --                 ------>MYB46(1)  --------->ANAC58 <---------ANAC58           <--------P     ------->GAMYB                ------>ZmHOX2a(1) --------->ANAC58 <---------ANAC58         <---------ZAT6  <--------   agttccatggttactctcctaccgtcggtcttccccaagctcgaaggtcactttcgtcttttccccatttctctgttagagttggtttaattcaaccgga  21928200                                                                                    ------->GAMYB                                                         <------MYB83--------->HSFC1(2)                                                        --------->MYB59      <---------WOX13(1)                                                   <---------YAB1    --------->HSFB2a(1)      <-----------GT1                              <---------AHL20(2)<---------HSFC1(2)          <---      --------->MYB52(1)                    --------->ATHB12        ------->TEIL   --------->ANAC58 -->LBD16                                  <---------YAB1<------MYB46(1)   --------->ATHB12      ---- ------->YAB1                            <------ZmHOX2a(1)         <-----------GT1 --------->ANAC58 < -LBD16        --------->At4g35610     --------->MYB59  <---------TOE2(3) <---------YAB1    <--------   atcagaaataaccgattagatgactaaaccgaatttttagttaggatgattgtataattaggttgttttgaaccttctgattgcaacggaatatttcatt  21928300  Previous    Next  AGI:  At5g53970.1    Description:  aminotransferase, putative. similar to aminotransferase-related [Arabidopsis thaliana] (TAIR:AT5G36160.1); similar to tyrosine aminotransferase [Glycine max] (GB:AAY21813.1); contains InterPro domain Aminotransferase, class I and II; (InterPro:IPR004839); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region (InterPro:IPR015424); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region, subdomain 1; (InterPro:IPR015421); contains InterPro domain 1-aminocyclopropane-1-carboxylate synthase; (InterPro:IPR001176); contains InterPro domain Tyrosine/nicotianamine aminotransferase; (InterPro:IPR0059 Range:  from: 21927759    to: 21930003    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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