Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        <---------MYB46(3)                    <---------ZAT2                  <----------DOF2                   ------>MYB83                  ---------->ID1                   ------>MYB46(1)               <-----------GT1       --------->REM1(1)         <---------O2   <-----------GT1               <---------ZAT14     --- ----DOF2--------->ANAC46        --------->O2<---------AHL20(2)               --------->ZAT14<-------   gatagccttacacctaaaacctagctgttgatgcaacgtctctctatttttttcctttttttttgcaacttgttcgcgtcttcactcttcaagactatag  21924500                                                                                                  ---                                               <-------TEIL                                       <--                                <---------ARR11(3)                                          ---------                         --------->ZAT14     --------->TOE2(2)                              ---------           --------->AHL20(2)   <---------AHL20(1)      --------->ATHB51                    ---------   ----------->RAV1(1)   <---------ZAT14  <-----------GT1   <-----------GT1                --------->ZAT18 ------>ZAT14     <-----------GT1<---------AHL20(2)     --------->AHL20(2)                 <---------ZAT18 --ZAT14   <---------AHL20(2)   --------->AHL20(1)      <---------AHL20(2)     <---------AHL20(2)<---   tacagccccatatataaattttacctgtatactatatatttgttttacatacgtagaattattttctctcttaacttgtattttcttgaattgcacgcta  21924600                                                       --------->ARR11(3)                                                      <---------CCA1(2)                                                    --------->AHL20(2)                                                   <---------YAB1                                                 --------->YAB1                                                 <--------ATHB1                          <---------AHL20(2)                                                 --------->ATHB12                        --------->AHL20(2) ------>ARR14(2)                                 <---------ICU4                         <---------AHL20(2) -------ARR11(3)                <---------YAB1  <---------YAB1       <----------DOF2  <---------YAB1 >ANAC58                      <----------DOF2   --------->ICU4 --------->TOE2(3)     <---------AHL20(2) >ANAC58             ------>ZmHOX2a(2)          <---------ATHB12     <---------DAG2<---------AHL20(2) >ANAC46          <------ZmHOX2a(1)         <---------YAB1<----------DOF2       --------->AHL20(1)<-- ------CCA1(2)  <---------TOE1(2)     <---------TOE2(3)<---------ARR11(3)      --------->YAB1     <--   tatctgaagaaaatgtagtaggatcgaagttactttgattaagtttatcaatgattatatctttatctcaactttacccaaacatattattttaaatatg  21924700                                  --------->YAB1                              --------->AHL20(1)                              <---------AHL20(1)                                                   <-            <---------GLK1(2) <---------AHL20(2)                                                  ---      <---------bZIP60(1)     --------->AHL20(2)                                                 <---      <---------GLK1(1)      <---------AHL20(2)                    --------->YAB1             -------      --------->bZIP60(1)    --------->AHL20(2)                   <---------YAB1             --------   <---------YAB1        --------->AHL20(2)                  ------>NtERF2                --------->YAB1 -------ANAC58     --------->At4g35610                   ------>ZmHOX2a(1)              --------->AHL20(2) -------ANAC58     <---------At4g35610                 ----------->RAV1(2)         <---------TOE2(3)   ccttgatgatatcagattatcagatgaataaataaattatagtattcccaggcctggtcctgaggcccattatagtttttcttctaagataaaaataagg  21924800    ---------->DOF2                                                                <-----------GT1 <------NtERF2       <-----------GT1                                              <-----------GT1 -----NtERF2        <---------AHL20(2)                                     --------->TOE2(3) --->NtERF2   ------>MYB46(1)                                          --------->AtMYB61 -------ID1   ------>MYB83                                            <---------MYB52(2) -->DAG2     ----------->RAV1(1)              --------->YAB1    *TSS  --------->MYB46(3) ->MYB52(1)--------->MYB46(3)       ---------->DOF2         <-----------GT1--------->TOE1(3)   ggccgaaaaagaaaccaacaaatttatcttatatactaaaaagcccaaacaaaatgtagaattaagcatcccacaaaccctaattttccctcttattctc  21924900                      <---------ALFIN1                   ------>ZmHOX2a(2)                  --------->CCA1(2)                  <------ZmHOX2a(2)                 --------->ARR11(3)                 --------->ARR14(2)                 <---------ARR11(3)                 --------->AGP1                 <---------ARR14(2)           <---------ANAC58                                                         <-----------HVH21           --------->ANAC55(2)                                             --------->ARR11(3)    <---           <---------ANAC55(1)                                             <---------ARR11(3)    <---           <---------ANAC55(2)                       ------>NtERF2         <---------ARR14(2)    ----           <---------ANAC46                 -------->P                     --------->ARR14(2)<-------           <---------ANAC58                 ------>MYB46(1)        --------->ZAT2   --------->LBD16       <---------ANAC58                <------ZmHOX2a(2)           <---------ZAT2  --------->ANAC46       <---------ANAC58  <----------DOF2    ------>MYB83    --------->REM1(1)   -------->P<---------YAB1   cctgctcttccttgcgtgagatctacactttctcagactcgatccctaccatggctgcctctacatcgcaactggaagatactacccgtgagattataga  21925000                                                                         <-------TEIL                                                                       <---------ARR14(2)                                                                       --------->ARR11(1)                                                                       --------->ARR14(2)        <---                                                                       --------->TOE1(2)     <-------          --------->ANAC58        --------->ANAC46                   ----------->ARR10       <-------          --------->ANAC46        --------->ANAC58             <---------ZAT2          ---------->DOF2          --------->ANAC58        --------->ANAC58             --------->ZAT2      ----------->GT1 <-------TEIL            --------->HSFC1(2)             <---------bZIP60(2)    --------->HSFB2a(2)--- ------------AtSPL3      <---------HSFC1(2)             <---------bZIP60(1)    <---------HSFB2a(2)--- ------------AtSPL8    <---------ARR14(2)               --------->bZIP60(1)  <------ZmHOX2a(2)  ----- ----------->AtSPL8  --------->ANAC46                --------->bZIP60(1)--------->ARR14(1)   -------- --HSFB2a(2)        <---------------------WRI1       <---------bZIP60(1)--------->CCA1(2)  ----------   aggtacttccatactcaacatcgacgatacttccatactcaacatcgacgatgtgatgacatcgcaactggaagatacgatcgagaagttaaagaaaggt  21925100   --------->ARR14(2)   <---------ARR14(2) ----TEIL                             <---------AHL20(1) --------AtSPL8                  <---------HSFB2a(2)                           <---------ANAC46 --------AtSPL3                  --------->HSFB2a(2)<---------GLK1(2)        <---------MYB46(3) ------>ANAC58                   --------------->AGL15                      <---------ZAT6 ------>ANAC58                   <---------------AGL15                 <----------DOF2 ---->CCA1(2)              <---------TOE1(2)      <---------YAB1    <---------ANAC58           ------ ->DAG2                   ------>ZmHOX2a(1)<---------AHL20(2)       <---------ANAC58          ------- >DOF2             <---------MYB52(1) --------->AHL20(1)         <-----------GT1   <------ZmHOX2a(1)   acgcgaatatttgtttattctgttattcctagtttctaaaaatattaaaactctgattctgttcaattttccgttttagtggtgaggagtttggaagaga  21925200                                                                                --------->ANAC58                                                                                --------->ANAC58                                                                            --------->DEAR3(1)                                                                           <------NtERF2                                                                           --------->RAP2.3(1)                                                                           --------->ATERF1(1)                                                                          ------>NtERF2                                                                          --------->LBD16                                                                         --------->RAP2.6(2)                                                                         --------->DEAR3(1)                                                                         --------->RAP2.3(2)                                                                         --------->ATERF1(2)                                                                         <---------ATERF1(2)                                                                        --------->ATERF1(1)                                                                        --------->ERF1                                                                        --------->RAP2.3(1)                                                                       <---------ATERF1(1)                                                                       ------>NtERF2                                                                       <---------At4g35610                     <---------ALFIN1      <---------MYB52(1)          --------->At4g35610 --------->ZAT14                    <------NtERF2      <---------At5g28300            <---------ATERF1(1)  <---------ETT(2) ----->GT1  --------->MYB46(3)        <-----------GT1               <---------At4g35610 <---------ANAC46 ---->GT1   <---------ATHB12        <----------DOF2     ---------->DOF2--------->ATERF1(1) <---------ZAT18   taaatagaaattcaaccatggcctcactcacatataagctttaccgttttatactggagaaagaagatgaggctgccgccgaactcaacgctgtggacac  21925300                                                                                               ------                                                                                            <--------                                                  --------->ATHB12                          <--------                                                 <---------YAB1                      <---------MYB46(3)                                                 <---------AHL20(2)                  <-----------RAV1(1)                                           <---------DDF1                            ================                                          --------->ETT(2)                    <-----------GT1 <------                                   <---------AHL20(2)                     <----------DOF2 <----------                                   --------->AHL20(1)                     --------->TOE1(3) ---------                       ---------->DOF2    <---------ETT(2)     ----------->RAV1(1)<-----------HVH21                  ----------->GT1  --------->AHL20(2)   <---------WOX13(1)--------->TOE2(3) ---------              <---------TOE2(3)    <---------AHL20(1) --------->ATHB12 <-----------GT1--------->At4g35610   agactctatcgagacaaaggttgtgaaaagtctaaaatttattgtcgacatattattgattgagacaacagtttaactttaaactgtctggtgcagctgg  21925400  Previous    Next  AGI:  At5g53960.1    Description:  ATP binding / DNA binding / DNA topoisomerase (ATP-hydrolyzing). contains InterPro domain DNA topoisomerase, type IIA, subunit A, alpha-helical; (InterPro:IPR013757) Range:  from: 21924864    to: 21925892    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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