Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100     --------->ATHB12 ----------DOF2 --->HSFB2a(1) --->HSFC1(2)                                   ----------->RAV1(1) ----HSFB2a(1)                               ------->GAMYB                                   <------ZmHOX2a(2) ----HSFC1(2)                              --------->At4g35610                          ---------->DOF2 -->ARR14(2)                           ------>ZmHOX2a(2)                               <---------AHL20(2) ---ARR14(2)                           --------->ANAC58                          --------->TOE2(3)  < >TEIL                                 --------->ANAC58     <---------YAB1 ------>MYB46(1)  <-------- -->GLK1(2)                        --------->MYB46(3)----------->GT1       ------>MYB83--------->AHL20(2) -----ARR10                 <<<<<<<<<TBF1  <---------At4g35610  <-------TEIL--------->MYB46(3)      - ---ARR11(1)             <<<<<<<<<TBF1<------ZmHOX2a(2) <-----------GT1 --------->MYB46(3)  ---------   ttctttgatttgtttctcttactcttcttcttcttcaccgatcgcaactgcaacattgtaacatgattcatcaaaccaacaatccctaattaaagatcaa  21913300                                              ------>ZmHOX2a(2)                 --------->YAB1     --------->ZAT6                           <---------MYB59                --------->WOX13(1) ----------DOF2                               ===========================HOX2a_HOX2a -ARR11(3)                                  <---------AGP1                <-----------HVH21 -------->TOE2(3)--------->YAB1             ------->TEIL             --------->MYB52(1) >ARR11(3)      <---------ATHB12 <---------AHL20(2)               <------ZmHOX2a(1)        <---------ATHB12   tactttaacacaaatcaaatcaaaagtttcgatttttaatctcatggatctaatttcaatacatgagaggataacgggtcagtcataaatccattcaatc  21913400                                                                   ------->TEIL                                                                   --------->ARR14(2)                                                                   --------->GLK1(2)                     --------->ANAC58                              <---------ARR11(1)            ----                     --------->ANAC58                              <---------ARR14(2)           -----                  --------->ANAC46                     --------->TOE2(3)                        -----              <----------DOF2                          <---------MYB59                <------ZmHOX2a(1)             <---------ICU4                      <---------------AtSPL8         <----------DOF2 <----      <-----------ARR10                 ---------->DOF2<---------DAG2         <---------YAB1  -------      <---------ARR11(3)    --------->ANAC58     --------------->AtSPL8      --------->ARR11(3) -----      --------->ARR11(3)    --------->ANAC58     <---------------AtSPL3      <---------ARR11(3) <----   gctagaaaaatctcatctttacgaagccataagaaacagagagaaagagagagagtaccttattagacgaatctttgattatctttgaggacgatgaaga  21913500       --------->ZAT14 >>>>>>>>>>>>>>>>>LFY                                                                       <-------- ----->CCA1(2)                                                                              <-------- ---->ARR11(1)                                ------>ZmHOX2a(1)                          <---------MYB52(1) ---->ARR11(3)                        <---------ANAC58                                   --------->DOF5.7(2) -----ARR14(2)                        <---------ANAC58                              <---------ARR14(2) ---->ARR10                      <----------DOF2                                   <------ZmHOX2a(1) ---->ARR14(2)              <---------DOF5.7(2)                                  <---------TOE2(3) -----ARR11(3)           --------->YAB1<----------DOF2                  ---------->DOF2 --------->TOE2(3)   tttgcccattgtactctcgagtctcgatggtaacgctttggctttctcctaatctctattactctgcaaaacaaaaaagaattgaggaatcgttaaggtt  21913600                                                                                                  <--                                                                                                  <--                                                                                                 <---                                                                                                 <---                                                                                                 ====                                                                                              -------                                              ---------->ID1                              --------->AHL20(2)                                          <----------DOF2                                 <---------AHL20(2)                                         <---------ANAC58                                 --------->AHL20(1)                                    --------->YAB1                                        <---------AHL20(1)                                    <---------ICU4                                       --------->AHL20(2)                                    -------->HAHB4                                    --------->AHL20(2)                                    --------->ATHB12                                 <---------AHL20(2)                                   --------->ICU4                                    --------->AHL20(2)                                   <---------YAB1                                --------->AHL20(2)                     ---------->ID1<---------ATHB12  *TSS  ------->MYC3          ----------->TBP <--- -TOE1(3)--------->ANAC58         <---------TOE2(3) <----------DOF2              <---------YAB1<----- -TOE2(3)--------->ANAC58 <----------DOF2<---------ANAC58  <-------MYC3<------------CBF  <---------AHL20(2)   tgagagagaacacgaacagttttgtcttctttaactaatgatggctttgtccctctttacacatgttaatggctattgaacttataaataaataaatttt  21913700                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                 ----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                          <---------ICU4           ----------->GT1                      <------------CBF                          <----------          ------------------------>ANAC81    <------MYB83                  <---------TOE2(3)    <----          ----------->GT1                  <--------P               <---------DAG2    ------>ZmHOX2a(1) -------------AGL15                       <-------GAMYB             --------------->AGL15 <---------- -------YAB1                             <---------MYB46(3)         <----------DOF2  <---------MYB59 --------------AGL1                      <------MYB83               <---------------AGL15 ----------- --------------AG                        <------MYB46(1)           ================================== ===================================================================================MADS_MADS  <----- -->AHL20(2)                        --------->ATHB12               <-----------------AGL3--------->ICU4 --------GT1                   --------->ICU4<------MYB46(1)  --------->TOE1(3)     ----------------- ----AHL20(2)          ---------->DOF2  <---------AtMYB61     --------->TOE2(3)     -----------------   atcaatatgggaatggaaaaaaaaaaaaaggaaatgtttgatttggttggaattggatgacaaaccctaacttttttaagaaagtttcctaattagtacc  21913800 --->MYB46(1) ------>MYB52(1) --->MYB83 ----->MYB55(1) -----MYB52(2)                                                      --------->ARR11(3) -----MYB46(2)                                                      <---------ARR11(3) -----MYB59                                                        --------->RVE1(1) -----AtSPL3                                                <------MYB83 -----MYB111(1)                                             <------MYB46(1) -----AtSPL8                                                ----------->GT1 ---->AtSPL8     <----------DOF2       ----------->GT1     --------->MYB59 =MADS_MADS<----------DOF2     --------->ARR11(3)        >>>>>>>>>CBP60g       <----------DOF2 ----ANAC55(2)---------->ID1  <------ZmHOX2a(1)          >>>>>>>>>SARD1  ---------->DOF2 >AG       <---------DAG2   <---------TOE1(3)       <---------TOE2(3) --------->TOE2(3)----------->GT1 >AGL1  <------ZmHOX2a(1)   <---------TOE2(3)   <----------DOF2    --------->CCA1(1)  <---------TOE2(3)   taacagaagaggacttttcctttttttcttaaggatgttgttagtaaatactttaagaaatttggtaaaaaatctcaaagacttttatgaggttttatgt  21913900                                                                       ------>ZmHOX2a(2)                                                                      <------ZmHOX2a(2)                               ----------->GT1               ------>MYB83                  ------>ZmHOX2a(1)                          ------>MYB46(1)        --------->YAB1       <---------LBD16               <---------MYB59             <----------DOF2   tttctcttaagaatagtttcctacaatttactggggaaaaaaaaaaaaactatacaatcgacctatcttgagatcgccgtttcaatagtcttttctaaga  21914000                    ------>ZmHOX2a(2)          --------->AHL20(1)               --------->YAB1          <---------AHL20(1)         ----------->GT1                    --------->HSFB2a(2)          --------->AHL20(2)         --------->YAB1                     <---------HSFB2a(2)          <---------AHL20(2)      ------>MYB83                     --------->At4g35610         --------->AHL20(2)       ------>MYB46(1)                  <---------At4g35610         <---------AHL20(2)       --------->MYB52(1)      <---------At4g35610     --------->AHL20(2)         <---------MYB59           --------->At4g35610                     <--   aaatcgaataaataaattctgatctaaattcaaacctaatggtaataaaaacacatagtctgctaattcatctgctagaaaattagtttctgtttttgta  21914100 <---------ANAC55(2) --------->ANAC46 --------->ANAC55(1)                                  --------->ATHB12 --------->ANAC58                                     <---------AHL20(2) --------->ANAC58                              <---------YAB1                                       - ----------->GT1                         --------->AHL20(2)   ----------->GT1               <-------- --------->ANAC55(2)       <---------ATHB12  --------->YAB1 <--------P<----------DOF2       --------- -------REM1(2)          --------->WOX13(1) <---------YAB1<---------MYB46(3)     <---------ZAT6    <-   tacacgtaaaaaatatggagtatcatccaatcagtttatgagatttattatgagatttattggttagtaaaacttttcatttagtgagaacccaaatacg  21914200  Previous    Next  AGI:  At5g53930.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G22795.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80069.1) Range:  from: 21911458    to: 21913653    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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