Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       ----------->GT1                                    --------->ALFIN1                                    <---------------AtSPL8                            ----------->GT1                                  <---------ANAC46                                  <----------DOF2                                  <---------ANAC58                        <---------------AtSPL8 -O2            --------->ATHB12  <---------ANAC58                        --------------->AtSPL8 -bZIP60(1)    <-------TEIL      <---------TOE2(3)                     --------->AHL20(2) >bZIP60(1)    <---------YAB1   <-----------GT1                 <-------TEIL  ------->TEIL          - >O2   ---------->DOF2      <----------DOF2               <---------AHL20(2)  <-------TEIL--------->AHL20(2)   aatttcaacaaaagagtttcattgccccttcttttaacgtggtacaaacttacttctcatataatgttcataaatatatgtacatactttgttaaaatac  21907500                                                                        <---------------AGL15                                                                        --------------->AGL15                                                                       --------->YAB1                                                                       <-----------------AG                                                                      <---------YAB1                                        <---------YAB1              <-----------GT1                                      <---------ZAT6               --------->AHL20(2)                             --------->TOE2(3)                     <---------AHL20(2)                            ----------->GT1    <----------DOF2  --------->ATHB51               <---------AHL20(1)    <---------YAB1             --------->AHL20(2)    --------->GLK1(2)               --------->AHL20(2)  <---------ICU4      <---------ARR11(3)            <---------GLK1(2) <---------AHL20(2)     <---------AHL20(2)--------->YAB1     --------->TOE2(3)     ----------->ARR10 -------->YAB1 <---------AHL20(2) --------->ICU4       --------->ARR11(3)     --------->MYB59   -----   tataaaaattgtagtattttattttttaaaatgttaattagtattaatactttagtatatattccataatttatcatattttggtaagattcttcttaga  21907600                                                                                                  <--               <------ZmHOX2a(1)                                                                <----              ----------->GT1                   --------->MYB59                         --------->AHL20(2)             <---------TOE2(3)                  <---------TOE1(3)                    --------->WOX13(1)            --------->YAB1      ----------->RAV1(1)<--------P                     --------->At5g28300       ------------>CBF --------->DAG2          <---------TOE2(3)          <-----------GT1  ---------  ---------->DOF2      ---------->DOF2---------->DOF2        --------->WRKY18(1) ----------->GT1----- ----->DOF2<---------ATHB12    --------->MYB46(3)----------->GT1--------->AtLEC2 <---------ZAT6------   aagaaaaaggccaatgaggaaacaaaaaagtcaacaacaaaaaagaatgtaaggtaagttttggtcatggaaagaattcactactgtaaatcaaatattt  21907700             ----------->TBP           --------->YAB1                                                         --------->ZAT18           --------->AHL20(2)                                                     --------->WRKY38(1)          <---------ATHB12                                                     <---------O2       ---        --------->WOX13(1)                             <---------AHL20(2)      --------->O2    ------      XXXXXXXXXXXXXXXXXXXX>MIR824                      --------->AHL20(2)      <---------ANAC46------      ------------>CBF                          ----------->GT1              ------>ZmHOX2a(1)------- ----------CBF           <------------CBF    ---------->DOF2                --------->TOE2(2) <------ -----AHL20(2)     ----------->GT1      --------->AHL20(2)              --------->YAB1        ------- >AHL20(2)<---------ATHB51             --------->AHL20(2)            --------->YAB1           ------- ---->AHL20(2)  ---------->DOF2        <---------AHL20(2)           --------->AHL20(2)       -------- --->AHL20(2)<---------YAB1     ----------->GT1--------->DAG2<-----------GT1--------->TOE1(2)--------   aattggaaaccaattataaaaaggaaatattggaccgaaaaataaataaaaggtaatataaattttccaaataataatcctacgtggactattccaccgc  21907800     ----------->GT1 --------->CBF                                                         --------->HSFC1(2)   --------- >NtERF2                                                               <---------HSFC1(2)------->GAMYB --->ABI4(1)                                                           <---------At4g35610-------->P -->DREB2C(2)                                                         --------->ANAC58  <---------MYB55(2) ---ALFIN1                                                   --------->bZIP60(2)        <---------MYB52(2) -->DEAR3(1)                       --------->ANAC46          --------->ANAC46           <---------MYB111(1) >GAMYB  ----------->TBP       <-----------GT1             <---------ALFIN1             --------->MYB46(3) ->ORA47(2)         --------->GLK1(2)                      --------->ANAC46    ------>ZmHOX2a(1) ->MYB46(3)        <---------GLK1(2)            <----------DOF2       --------->ANAC58  <---------MYB111(2)   ctcaatagagtataaatataagaatctctgaatttacacattacaaatctctttggtctacccacatcatggaagctactcctgtattcaactaccatat  21907900                                                              --------->MYB46(3)                                                             --------->At4g35610                                                          <------ZmHOX2a(2)                                                         --------->ARR14(2)                                                         <---------ARR14(2)         <---------LBD16                     --------->ATHB12                  <---------DEAR3(2)         -------->P                  ---------->DOF2                     <---------TOE1(2)     --------->ARR14(2)             --------->ANAC58                       <-----------HVH21       <---------ARR14(2)             --------->ANAC46                      <---------ANAC46      <------NtERF2             --------->ANAC58                      <---------ANAC58     ------>NtERF2    --------->WOX13(1) <---------WOX13(1)          <---------ANAC58  <-----------HVH21--------->LBD16 >YAB1   ------>ZmHOX2a(1)              --------------------->WRI1  <-----------RAV1(1)            <-   tgatgtcaatcctgaacgcaaaaagattggcacaatccaagtctatgtaagtttcgtcggatcagccaacatgtcgccgatactaacccggtctaacttc  21908000                                     --------->ARR14(2)                                     --------->ARR11(3)                                     <---------GLK1(2)                                     <---------ARR11(3)                                     <---------ARR14(2)                                    <---------HSFC1(2)                                    <---------HSFB2a(1)                                    --------->HSFC1(2)                          ------->GAMYB                       --------->MYB52(1)                                           --------->At4g35610            ------>MYB46(1)--------->MYB52(1)                                       <---------At4g35610            ------>MYB83  ----------->HVH21                                      --------->At4g35610         <---------ANAC58 ----------->TGA1                                       <---------At4g35610         <---------ANAC58<---------MYB52(2)                                   <-------TEIL         ----------->RAV1(2) <---------ETT(2)--------->ANAC46               <---------ARR14(2)      <    <---------ICU4     <-----------GT1--------->GLK1(2)                     <---------GLK1(2)       <   <-------TEIL   --------->AHL20(2)--------->HSFB2a(1)                     --------->ARR14(2)   <--- --------TOE1(2) <---------ATHB12  ----------->ARR10---------->DOF2    --------->MYB52(1)  <---------   tcatgttcattacctgccaatgaattaactgacgacgaagattctccccacaaacaaagactctattacttcttaacagattcagcagttgattcacaag  21908100                                    <-------MYC4                                    ------->MYC4                                    <-------MYC2                                    <-------MYC3                                    ------->MYC2                                    ------->MYC3                                    ------->PIF4                                    <-------PIF5                                    ------->PIF5                                    <-------PIF4                                   <---------ANAC55(2)                                   --------->ANAC46                                          --------            --------->ZAT6         --------->ANAC55(2)                                       --------       --------->TOE2(3)           --------->ANAC58                               <-----------HVH21      ----------->GT1              --------->TGA1a                             <----------DOF2      --------->ANAC58             <---------TGA1a                          <---------YAB1  <--------      --------->ANAC58             --------->ANAC58                      <---------MYB52(1)<-------GAMYB ---------ANAC58                 <------------OsbHLH66                 --------->bZIP60(2)<---------MYB46(3) ---------ANAC58        --------->ANAC58                               --------->ANAC58  --------->ALFIN1 ------ARR11(3)         --------->ANAC46                               --------->ANAC46  <---------AtMYB61 --GT1--------->ANAC46  --------->ANAC58   <-----------GT1             --------->ANAC58 --------->ZAT14   atgcttacacgttaatactaaaactcactcaacttgcacgtgatttaacttctaattcgtttgaatactgtccacgttatgctttgtcagtgtggttgac  21908200                                                                      ------>NtERF2                                                             <---------TOE2(3)                                                 --------->LBD16   <---------DEAR3(2)     --------->ALFIN1                           --------->ANAC58   <---------ATERF1(1)   <-----------RAV1(1)                          --------->ANAC58  <---------DEAR3(1)            <----   <---------bZIP60(2)              <---------ANAC58         <---------TOE1(3)<-----------RAV1(2)   <---------REM1(1)    <---------YAB1          --------->ANAC46  --------->ETT(1)             ------ ->WRKY38(1)         ------->TEIL   <---------ANAC58--------->ANAC58--------->ATERF1(1) --------->CCA1(2) ->WRKY12       <---------AtLEC2    <---------ANAC46--------->ANAC58<------NtERF2    <---------KAN4(2) -WOX13(1)  <----------DOF2   <------ZmHOX2a(1)<---------LBD16  <-----------HVH21<------ZmHOX2a(1)   tcttgatgtggctcctttgaatgaatatgagaggaatagcgagtatagacccgcgagcaatttaagggtcggagccttgagcaggagaatatacaagagg  21908300                                     <-------TEIL            <----------DOF2          <-----------------------TaNAC69(2)          --------->LBD16           --------->AGP1           --------->CCA1(2)                           --------->ANAC58          --------->ZAT2           <---------ARR11(3)                           --------->ANAC58  ---  ---------->DOF2                --------->ANAC58                   <---------ANAC46         <------- --ZmHOX2a(1)               --------->ZAT18                       <---------MYB46(3)         <------- ----->GT1--------->At4g35610    --------->ANAC58                <---------ZAT6 --------->ANAC46<----   aaacaaaagaccagctctattgctaacaagagcacaagatacatgagaaaacgagagacctattctagtggtgagtacaaatgcgcaatttgttttcagg  21908400  Previous    Next  AGI:  At5g53910.1    Description:  (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G18760.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18068.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 21907869    to: 21908561    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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